FFCP PHASE1:Mm9::chr7:28438925..28438979,+: Difference between revisions
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{{FFCP|EntrezGene=73032|HGNC=|MCL_coexpression_id=13|UniProt=Q9D6E4|association_with_transcript=0bp_to_ENSMUST00000008088,NM_028417,uc009fwu.1_5end|description=CAGE_peak_1_at_Ttc9b_5end|id=chr7:28438925..28438979,+|ontology_enrichment_celltype=CL:0000540!3.44e-18!33;CL:0000047!3.44e-18!33;CL:0000031!3.44e-18!33;CL:0000404!3.44e-18!33;CL:0000117!4.11e-16!23;CL:0000337!4.11e-16!23;CL:0000221!6.09e-16!44;CL:0000133!6.09e-16!44;CL:0002319!1.14e-15!43;CL:0000393!7.29e-13!39;CL:0000211!7.29e-13!39;CL:0000055!5.01e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,4.49e-22,33;CL:0000047,4.49e-22,33;CL:0000031,4.49e-22,33;CL:0000404,4.49e-22,33;CL:0000117,1.65e-19,23;CL:0000337,1.65e-19,23;CL:0000221,5.60e-18,44;CL:0000133,5.60e-18,44;CL:0002319,1.21e-17,43;CL:0000393,1.16e-16,39;CL:0000211,1.16e-16,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.03e-33!75;UBERON:0001016!5.03e-33!75;UBERON:0001017!6.82e-33!73;UBERON:0005743!6.82e-33!73;UBERON:0004121!9.76e-30!102;UBERON:0000924!9.76e-30!102;UBERON:0006601!9.76e-30!102;UBERON:0002346!5.74e-29!71;UBERON:0003075!5.74e-29!71;UBERON:0007284!5.74e-29!71;UBERON:0001049!2.72e-25!52;UBERON:0005068!2.72e-25!52;UBERON:0006241!2.72e-25!52;UBERON:0007135!2.72e-25!52;UBERON:0000033!2.69e-24!63;UBERON:0000955!4.56e-23!50;UBERON:0006238!4.56e-23!50;UBERON:0002616!2.00e-22!49;UBERON:0002020!8.32e-22!34;UBERON:0003056!1.04e-20!49;UBERON:0003080!3.27e-19!40;UBERON:0002780!1.13e-18!39;UBERON:0001890!1.13e-18!39;UBERON:0006240!1.13e-18!39;UBERON:0002791!8.54e-18!29;UBERON:0003528!8.54e-18!29;UBERON:0001893!8.54e-18!29;UBERON:0000956!7.70e-13!21;UBERON:0001869!7.70e-13!21;UBERON:0000203!7.70e-13!21;UBERON:0007811!1.76e-12!86;UBERON:0002619!2.86e-10!17;UBERON:0000153!3.39e-10!94;UBERON:0002021!6.11e-09!10;UBERON:0000411!6.11e-09!10;UBERON:0001950!6.11e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.21e-38,73;UBERON:0001016,1.97e-37,75;UBERON:0004121,9.53e-32,95;UBERON:0000924,9.53e-32,95;UBERON:0006601,9.53e-32,95;UBERON:0002346,5.45e-31,64;UBERON:0003075,5.45e-31,64;UBERON:0007284,5.45e-31,64;UBERON:0000073,9.85e-31,54;UBERON:0001049,3.18e-29,52;UBERON:0005068,3.18e-29,52;UBERON:0006241,3.18e-29,52;UBERON:0007135,3.18e-29,52;UBERON:0010371,1.81e-26,73;UBERON:0002020,4.74e-26,34;UBERON:0000955,2.08e-24,47;UBERON:0006238,2.08e-24,47;UBERON:0002616,1.22e-23,46;UBERON:0003056,1.01e-21,49;UBERON:0003080,1.51e-21,40;UBERON:0003528,4.10e-21,29;UBERON:0002791,4.10e-21,29;UBERON:0001893,4.10e-21,29;UBERON:0002780,6.84e-21,39;UBERON:0001890,6.84e-21,39;UBERON:0006240,6.84e-21,39;UBERON:0010314,3.32e-20,92;UBERON:0000956,5.17e-15,21;UBERON:0001869,5.17e-15,21;UBERON:0000203,5.17e-15,21;UBERON:0002619,7.40e-12,17;UBERON:0002021,1.16e-10,10;UBERON:0000411,1.16e-10,10;UBERON:0001950,1.16e-10,10;UBERON:0003076,4.58e-08,12;UBERON:0003057,4.58e-08,12;UBERON:0002420,2.88e-07,8;UBERON:0007245,2.88e-07,8;UBERON:0010009,2.88e-07,8;UBERON:0010011,2.88e-07,8;UBERON:0000454,2.88e-07,8|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3107575900923,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,69.1922296139824,74.5877280773566,96.9762047364454,0,0,0,0,0,3.29560121570245,9.22123932771731,41.4758449233911,58.052553482627,48.7953910335206,191.386159550548,159.025349485162,50.9561724734209,39.2007976464587,87.325784727952,26.4278114398533,25.9205296312931,21.8121277223866,62.3822140963817,58.4606042619398,53.1331637967895,44.1109138422182,24.7615548413939,26.1285003698345,135.234520732413,113.327857916086,77.1693705716744,0.530083353332288,1.51143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,5.63373679106722,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,3.81667718885499,4.56698217468212,3.45923245884088,3.76806601381556,2.23418543557839,0.251333182659351,0,0,0,0.161766849947409,0,0,0,31.034764483224,36.4437269855412,0,0,0,0,22.0192239925089,40.7175536508578,50.1360864930329,95.6033761057521,110.469077566703,25.7657175253855,40.7225570300072,0,0,0,0.841767423545896,0.780722657776222,5.0578462975364,6.12211241338187,4.82255417074288,2.51735046859913,3.58718416797579,4.59138450342671,3.62184719034622,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,36.8007409987223,33.649808248026,0,0,0.639864751605702,1.39342003116263,1.03093969057675,1.00841762311671,0.889512175379481,0.570676878337677,0,0.658795818896044,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0.569003702859245,0.685491075658373,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,26.0091955780223,25.6693593636925,0,0,5.99465616890888,8.19921363022941,9.69405289797595,2.15071918157297,2.89638276307112,3.67999490025482,3.64329631507405,11.3979784585412,7.90575555893047,36.9519513885078,0,0.178065603667255,0.162886959353576,0,0,0,0,0.377210159511796,0.295301892880773,0,0.775284879504663,0,0,0.316036757935816,0,0,0,2.34079422240703,1.29358683782755,0.428674070063185,0.354680467284547,4.28085162244969,7.56925494769756,12.4830629136986,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,17.6154036909984,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.609958401380546,0.756037385752609,0.836353184057875,1.31017538247707,1.07891477107857,0.247960367176008,0,0.129614973291793,0,0.56369293868419,0,0,0,0.645799117388655,0,0.352071715937262,0,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0.295379054349154,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,116.903631421733,128.430740985502,108.277252040046,201.755636071489,126.740266157569,117.841447992793,118.128937540566,114.381585618952,93.3473362507461,96.8211782975903,4.15149390336707,3.59122386060928,7.68301225893604,5.83456120963906,9.22297915563122,12.501358574601,10.6678429344775,9.68364769022803,10.9112531261217,8.59170519996911,7.35089969681695,6.79054828989874,9.83235828433765,9.92389862275474,8.32814299856392,8.57328644309533,9.618399053423,9.45255180272155,9.47797571847605,7.06554816645107,9.60033906679163,5.50174999093946,7.39152188836695,6.68593516508711,8.28162547654909,7.86915853392591,8.78054269789308,5.26139422875686,10.1853085384396,10.661703161497,10.202611558679,8.76689893142515,9.00308294973317,8.98633678878603,7.71626443924566,27.2293529952361,6.78401664491684,4.08255002691767,6.31251495827183,4.19123696327079,3.94175320554716|short_description=p1@Ttc9b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:73032 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D6E4 | |||
|association_with_transcript=0bp_to_ENSMUST00000008088,NM_028417,uc009fwu.1_5end | |||
|cluster_id=chr7:28438925..28438979,+ | |||
|description=CAGE_peak_1_at_Ttc9b_5end | |||
|id=chr7:28438925..28438979,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.44e-18!33;CL:0000047!3.44e-18!33;CL:0000031!3.44e-18!33;CL:0000404!3.44e-18!33;CL:0000117!4.11e-16!23;CL:0000337!4.11e-16!23;CL:0000221!6.09e-16!44;CL:0000133!6.09e-16!44;CL:0002319!1.14e-15!43;CL:0000393!7.29e-13!39;CL:0000211!7.29e-13!39;CL:0000055!5.01e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.49e-22,33;CL:0000047,4.49e-22,33;CL:0000031,4.49e-22,33;CL:0000404,4.49e-22,33;CL:0000117,1.65e-19,23;CL:0000337,1.65e-19,23;CL:0000221,5.60e-18,44;CL:0000133,5.60e-18,44;CL:0002319,1.21e-17,43;CL:0000393,1.16e-16,39;CL:0000211,1.16e-16,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.03e-33!75;UBERON:0001016!5.03e-33!75;UBERON:0001017!6.82e-33!73;UBERON:0005743!6.82e-33!73;UBERON:0004121!9.76e-30!102;UBERON:0000924!9.76e-30!102;UBERON:0006601!9.76e-30!102;UBERON:0002346!5.74e-29!71;UBERON:0003075!5.74e-29!71;UBERON:0007284!5.74e-29!71;UBERON:0001049!2.72e-25!52;UBERON:0005068!2.72e-25!52;UBERON:0006241!2.72e-25!52;UBERON:0007135!2.72e-25!52;UBERON:0000033!2.69e-24!63;UBERON:0000955!4.56e-23!50;UBERON:0006238!4.56e-23!50;UBERON:0002616!2.00e-22!49;UBERON:0002020!8.32e-22!34;UBERON:0003056!1.04e-20!49;UBERON:0003080!3.27e-19!40;UBERON:0002780!1.13e-18!39;UBERON:0001890!1.13e-18!39;UBERON:0006240!1.13e-18!39;UBERON:0002791!8.54e-18!29;UBERON:0003528!8.54e-18!29;UBERON:0001893!8.54e-18!29;UBERON:0000956!7.70e-13!21;UBERON:0001869!7.70e-13!21;UBERON:0000203!7.70e-13!21;UBERON:0007811!1.76e-12!86;UBERON:0002619!2.86e-10!17;UBERON:0000153!3.39e-10!94;UBERON:0002021!6.11e-09!10;UBERON:0000411!6.11e-09!10;UBERON:0001950!6.11e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.21e-38,73;UBERON:0001016,1.97e-37,75;UBERON:0004121,9.53e-32,95;UBERON:0000924,9.53e-32,95;UBERON:0006601,9.53e-32,95;UBERON:0002346,5.45e-31,64;UBERON:0003075,5.45e-31,64;UBERON:0007284,5.45e-31,64;UBERON:0000073,9.85e-31,54;UBERON:0001049,3.18e-29,52;UBERON:0005068,3.18e-29,52;UBERON:0006241,3.18e-29,52;UBERON:0007135,3.18e-29,52;UBERON:0010371,1.81e-26,73;UBERON:0002020,4.74e-26,34;UBERON:0000955,2.08e-24,47;UBERON:0006238,2.08e-24,47;UBERON:0002616,1.22e-23,46;UBERON:0003056,1.01e-21,49;UBERON:0003080,1.51e-21,40;UBERON:0003528,4.10e-21,29;UBERON:0002791,4.10e-21,29;UBERON:0001893,4.10e-21,29;UBERON:0002780,6.84e-21,39;UBERON:0001890,6.84e-21,39;UBERON:0006240,6.84e-21,39;UBERON:0010314,3.32e-20,92;UBERON:0000956,5.17e-15,21;UBERON:0001869,5.17e-15,21;UBERON:0000203,5.17e-15,21;UBERON:0002619,7.40e-12,17;UBERON:0002021,1.16e-10,10;UBERON:0000411,1.16e-10,10;UBERON:0001950,1.16e-10,10;UBERON:0003076,4.58e-08,12;UBERON:0003057,4.58e-08,12;UBERON:0002420,2.88e-07,8;UBERON:0007245,2.88e-07,8;UBERON:0010009,2.88e-07,8;UBERON:0010011,2.88e-07,8;UBERON:0000454,2.88e-07,8 | |||
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3107575900923,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,69.1922296139824,74.5877280773566,96.9762047364454,0,0,0,0,0,3.29560121570245,9.22123932771731,41.4758449233911,58.052553482627,48.7953910335206,191.386159550548,159.025349485162,50.9561724734209,39.2007976464587,87.325784727952,26.4278114398533,25.9205296312931,21.8121277223866,62.3822140963817,58.4606042619398,53.1331637967895,44.1109138422182,24.7615548413939,26.1285003698345,135.234520732413,113.327857916086,77.1693705716744,0.530083353332288,1.51143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,5.63373679106722,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,3.81667718885499,4.56698217468212,3.45923245884088,3.76806601381556,2.23418543557839,0.251333182659351,0,0,0,0.161766849947409,0,0,0,31.034764483224,36.4437269855412,0,0,0,0,22.0192239925089,40.7175536508578,50.1360864930329,95.6033761057521,110.469077566703,25.7657175253855,40.7225570300072,0,0,0,0.841767423545896,0.780722657776222,5.0578462975364,6.12211241338187,4.82255417074288,2.51735046859913,3.58718416797579,4.59138450342671,3.62184719034622,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,36.8007409987223,33.649808248026,0,0,0.639864751605702,1.39342003116263,1.03093969057675,1.00841762311671,0.889512175379481,0.570676878337677,0,0.658795818896044,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0.569003702859245,0.685491075658373,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,26.0091955780223,25.6693593636925,0,0,5.99465616890888,8.19921363022941,9.69405289797595,2.15071918157297,2.89638276307112,3.67999490025482,3.64329631507405,11.3979784585412,7.90575555893047,36.9519513885078,0,0.178065603667255,0.162886959353576,0,0,0,0,0.377210159511796,0.295301892880773,0,0.775284879504663,0,0,0.316036757935816,0,0,0,2.34079422240703,1.29358683782755,0.428674070063185,0.354680467284547,4.28085162244969,7.56925494769756,12.4830629136986,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,17.6154036909984,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.609958401380546,0.756037385752609,0.836353184057875,1.31017538247707,1.07891477107857,0.247960367176008,0,0.129614973291793,0,0.56369293868419,0,0,0,0.645799117388655,0,0.352071715937262,0,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0.295379054349154,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,116.903631421733,128.430740985502,108.277252040046,201.755636071489,126.740266157569,117.841447992793,118.128937540566,114.381585618952,93.3473362507461,96.8211782975903,4.15149390336707,3.59122386060928,7.68301225893604,5.83456120963906,9.22297915563122,12.501358574601,10.6678429344775,9.68364769022803,10.9112531261217,8.59170519996911,7.35089969681695,6.79054828989874,9.83235828433765,9.92389862275474,8.32814299856392,8.57328644309533,9.618399053423,9.45255180272155,9.47797571847605,7.06554816645107,9.60033906679163,5.50174999093946,7.39152188836695,6.68593516508711,8.28162547654909,7.86915853392591,8.78054269789308,5.26139422875686,10.1853085384396,10.661703161497,10.202611558679,8.76689893142515,9.00308294973317,8.98633678878603,7.71626443924566,27.2293529952361,6.78401664491684,4.08255002691767,6.31251495827183,4.19123696327079,3.94175320554716 | |||
|short_description=p1@Ttc9b | |||
}} |
Revision as of 21:55, 4 August 2015
Short description: | p1@Ttc9b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ttc9b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000008088, NM_028417, uc009fwu.1_5end |
EntrezGene: | 73032 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.49e-22 | 33 |
neuronal stem cell | 4.49e-22 | 33 |
neuroblast | 4.49e-22 | 33 |
electrically signaling cell | 4.49e-22 | 33 |
CNS neuron (sensu Vertebrata) | 1.65e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-19 | 23 |
ectodermal cell | 5.60e-18 | 44 |
neurectodermal cell | 5.60e-18 | 44 |
neural cell | 1.21e-17 | 43 |
electrically responsive cell | 1.16e-16 | 39 |
electrically active cell | 1.16e-16 | 39 |