FFCP PHASE1:Mm9::chr7:86644862..86644873,+: Difference between revisions
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{{FFCP|EntrezGene=101694|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-38bp_to_NR_040311,NR_040313,NR_040314_5end|description=CAGE_peak_4_at_AI854517_5end|id=chr7:86644862..86644873,+|ontology_enrichment_celltype=CL:0000117!2.52e-20!23;CL:0000337!2.52e-20!23;CL:0002319!2.15e-14!43;CL:0000221!7.10e-14!44;CL:0000133!7.10e-14!44;CL:0000540!4.37e-12!33;CL:0000047!4.37e-12!33;CL:0000031!4.37e-12!33;CL:0000404!4.37e-12!33;CL:0000055!3.22e-11!50;CL:0000393!3.04e-09!39;CL:0000211!3.04e-09!39;CL:0002609!8.11e-07!6|ontology_enrichment_celltype_v019_2=CL:0002610,3.10e-08,3;CL:0000117,5.91e-07,23;CL:0000337,5.91e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.21e-39!52;UBERON:0005068!8.21e-39!52;UBERON:0006241!8.21e-39!52;UBERON:0007135!8.21e-39!52;UBERON:0001017!4.50e-38!73;UBERON:0005743!4.50e-38!73;UBERON:0000955!3.17e-37!50;UBERON:0006238!3.17e-37!50;UBERON:0002020!9.34e-37!34;UBERON:0000073!1.31e-36!75;UBERON:0001016!1.31e-36!75;UBERON:0002616!6.50e-36!49;UBERON:0000033!6.06e-34!63;UBERON:0002791!1.82e-31!29;UBERON:0003528!1.82e-31!29;UBERON:0001893!1.82e-31!29;UBERON:0002346!3.26e-31!71;UBERON:0003075!3.26e-31!71;UBERON:0007284!3.26e-31!71;UBERON:0004121!4.31e-28!102;UBERON:0000924!4.31e-28!102;UBERON:0006601!4.31e-28!102;UBERON:0003056!1.40e-27!49;UBERON:0003080!1.67e-27!40;UBERON:0002780!1.78e-26!39;UBERON:0001890!1.78e-26!39;UBERON:0006240!1.78e-26!39;UBERON:0000956!1.54e-23!21;UBERON:0001869!1.54e-23!21;UBERON:0000203!1.54e-23!21;UBERON:0007811!7.35e-21!86;UBERON:0002619!1.37e-19!17;UBERON:0000153!7.57e-18!94;UBERON:0002021!1.74e-13!10;UBERON:0000411!1.74e-13!10;UBERON:0001950!1.74e-13!10;UBERON:0003076!2.63e-11!12;UBERON:0003057!2.63e-11!12;UBERON:0000025!3.40e-10!114;UBERON:0002420!6.96e-09!8;UBERON:0007245!6.96e-09!8;UBERON:0010009!6.96e-09!8;UBERON:0010011!6.96e-09!8;UBERON:0000454!6.96e-09!8;UBERON:0004111!1.03e-08!122;UBERON:0001954!1.34e-07!7;UBERON:0003022!1.34e-07!7;UBERON:0002421!1.34e-07!7;UBERON:0000349!1.34e-07!7;UBERON:0002600!1.34e-07!7;UBERON:0002240!2.31e-07!6;UBERON:0005174!2.31e-07!6;UBERON:0001137!2.31e-07!6;UBERON:0002298!2.71e-07!6;UBERON:0000064!2.92e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.04e-41,54;UBERON:0001049,4.09e-37,52;UBERON:0005068,4.09e-37,52;UBERON:0006241,4.09e-37,52;UBERON:0007135,4.09e-37,52;UBERON:0000955,8.33e-36,47;UBERON:0006238,8.33e-36,47;UBERON:0001017,1.43e-35,73;UBERON:0001016,1.94e-34,75;UBERON:0002616,9.69e-34,46;UBERON:0002346,6.06e-29,64;UBERON:0003075,6.06e-29,64;UBERON:0007284,6.06e-29,64;UBERON:0002020,5.72e-28,34;UBERON:0003528,5.06e-27,29;UBERON:0002791,5.06e-27,29;UBERON:0001893,5.06e-27,29;UBERON:0004121,9.73e-26,95;UBERON:0000924,9.73e-26,95;UBERON:0006601,9.73e-26,95;UBERON:0003080,1.58e-25,40;UBERON:0002021,1.09e-24,10;UBERON:0000411,1.09e-24,10;UBERON:0001950,1.09e-24,10;UBERON:0010371,1.41e-24,73;UBERON:0000956,5.19e-24,21;UBERON:0001869,5.19e-24,21;UBERON:0000203,5.19e-24,21;UBERON:0002780,6.49e-24,39;UBERON:0001890,6.49e-24,39;UBERON:0006240,6.49e-24,39;UBERON:0002619,8.23e-23,17;UBERON:0003056,6.89e-20,49;UBERON:0010314,3.74e-18,92;UBERON:0000025,2.19e-13,114;UBERON:0004111,4.44e-12,122;UBERON:0003076,9.42e-12,12;UBERON:0003057,9.42e-12,12;UBERON:0004733,1.01e-09,6;UBERON:0004732,1.01e-09,6;UBERON:0002028,1.01e-09,6;UBERON:0007277,1.01e-09,6;UBERON:0011216,5.62e-09,194;UBERON:0004684,3.10e-08,3;UBERON:0002275,3.10e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0.777719596297134,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0.725827286159344,0.540023753326763,1.05162480675691,1.99955689082663,1.76694832761291,0.61245399607477,0.479227355091182,1.83843757322004,3.30347642998166,1.65993539510744,1.53606533256243,0.527545150920775,0.274462930807229,1.04182674111352,1.3959149950069,0.56276261003168,0.916789486660861,0.883885756421003,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.46612694769419,0,0,0,0,1.3481157546434,2.28750301409313,1.88481528169297,2.43354048269187,2.55715457330331,2.0778804455956,2.92034273521964,0,0,0,0.210441855886474,0,0,0,0,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,3.22227665555024,2.29158205375759,3.43706364687375,2.74033007908257,1.5107877947794,1.35004500046361,3.15224842256954,1.81256963593682,1.55328093525546,0.103787347584177,0,0,0,0.419226325255965,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0.526139422875686,0.543216455383447,0,0.237270036248348,0,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0,0,0,0|short_description=p4@AI854517}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:101694 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-38bp_to_NR_040311,NR_040313,NR_040314_5end | |||
|cluster_id=chr7:86644862..86644873,+ | |||
|description=CAGE_peak_4_at_AI854517_5end | |||
|id=chr7:86644862..86644873,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.52e-20!23;CL:0000337!2.52e-20!23;CL:0002319!2.15e-14!43;CL:0000221!7.10e-14!44;CL:0000133!7.10e-14!44;CL:0000540!4.37e-12!33;CL:0000047!4.37e-12!33;CL:0000031!4.37e-12!33;CL:0000404!4.37e-12!33;CL:0000055!3.22e-11!50;CL:0000393!3.04e-09!39;CL:0000211!3.04e-09!39;CL:0002609!8.11e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.10e-08,3;CL:0000117,5.91e-07,23;CL:0000337,5.91e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.21e-39!52;UBERON:0005068!8.21e-39!52;UBERON:0006241!8.21e-39!52;UBERON:0007135!8.21e-39!52;UBERON:0001017!4.50e-38!73;UBERON:0005743!4.50e-38!73;UBERON:0000955!3.17e-37!50;UBERON:0006238!3.17e-37!50;UBERON:0002020!9.34e-37!34;UBERON:0000073!1.31e-36!75;UBERON:0001016!1.31e-36!75;UBERON:0002616!6.50e-36!49;UBERON:0000033!6.06e-34!63;UBERON:0002791!1.82e-31!29;UBERON:0003528!1.82e-31!29;UBERON:0001893!1.82e-31!29;UBERON:0002346!3.26e-31!71;UBERON:0003075!3.26e-31!71;UBERON:0007284!3.26e-31!71;UBERON:0004121!4.31e-28!102;UBERON:0000924!4.31e-28!102;UBERON:0006601!4.31e-28!102;UBERON:0003056!1.40e-27!49;UBERON:0003080!1.67e-27!40;UBERON:0002780!1.78e-26!39;UBERON:0001890!1.78e-26!39;UBERON:0006240!1.78e-26!39;UBERON:0000956!1.54e-23!21;UBERON:0001869!1.54e-23!21;UBERON:0000203!1.54e-23!21;UBERON:0007811!7.35e-21!86;UBERON:0002619!1.37e-19!17;UBERON:0000153!7.57e-18!94;UBERON:0002021!1.74e-13!10;UBERON:0000411!1.74e-13!10;UBERON:0001950!1.74e-13!10;UBERON:0003076!2.63e-11!12;UBERON:0003057!2.63e-11!12;UBERON:0000025!3.40e-10!114;UBERON:0002420!6.96e-09!8;UBERON:0007245!6.96e-09!8;UBERON:0010009!6.96e-09!8;UBERON:0010011!6.96e-09!8;UBERON:0000454!6.96e-09!8;UBERON:0004111!1.03e-08!122;UBERON:0001954!1.34e-07!7;UBERON:0003022!1.34e-07!7;UBERON:0002421!1.34e-07!7;UBERON:0000349!1.34e-07!7;UBERON:0002600!1.34e-07!7;UBERON:0002240!2.31e-07!6;UBERON:0005174!2.31e-07!6;UBERON:0001137!2.31e-07!6;UBERON:0002298!2.71e-07!6;UBERON:0000064!2.92e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.04e-41,54;UBERON:0001049,4.09e-37,52;UBERON:0005068,4.09e-37,52;UBERON:0006241,4.09e-37,52;UBERON:0007135,4.09e-37,52;UBERON:0000955,8.33e-36,47;UBERON:0006238,8.33e-36,47;UBERON:0001017,1.43e-35,73;UBERON:0001016,1.94e-34,75;UBERON:0002616,9.69e-34,46;UBERON:0002346,6.06e-29,64;UBERON:0003075,6.06e-29,64;UBERON:0007284,6.06e-29,64;UBERON:0002020,5.72e-28,34;UBERON:0003528,5.06e-27,29;UBERON:0002791,5.06e-27,29;UBERON:0001893,5.06e-27,29;UBERON:0004121,9.73e-26,95;UBERON:0000924,9.73e-26,95;UBERON:0006601,9.73e-26,95;UBERON:0003080,1.58e-25,40;UBERON:0002021,1.09e-24,10;UBERON:0000411,1.09e-24,10;UBERON:0001950,1.09e-24,10;UBERON:0010371,1.41e-24,73;UBERON:0000956,5.19e-24,21;UBERON:0001869,5.19e-24,21;UBERON:0000203,5.19e-24,21;UBERON:0002780,6.49e-24,39;UBERON:0001890,6.49e-24,39;UBERON:0006240,6.49e-24,39;UBERON:0002619,8.23e-23,17;UBERON:0003056,6.89e-20,49;UBERON:0010314,3.74e-18,92;UBERON:0000025,2.19e-13,114;UBERON:0004111,4.44e-12,122;UBERON:0003076,9.42e-12,12;UBERON:0003057,9.42e-12,12;UBERON:0004733,1.01e-09,6;UBERON:0004732,1.01e-09,6;UBERON:0002028,1.01e-09,6;UBERON:0007277,1.01e-09,6;UBERON:0011216,5.62e-09,194;UBERON:0004684,3.10e-08,3;UBERON:0002275,3.10e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0.777719596297134,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0.725827286159344,0.540023753326763,1.05162480675691,1.99955689082663,1.76694832761291,0.61245399607477,0.479227355091182,1.83843757322004,3.30347642998166,1.65993539510744,1.53606533256243,0.527545150920775,0.274462930807229,1.04182674111352,1.3959149950069,0.56276261003168,0.916789486660861,0.883885756421003,0.854230084794618,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.46612694769419,0,0,0,0,1.3481157546434,2.28750301409313,1.88481528169297,2.43354048269187,2.55715457330331,2.0778804455956,2.92034273521964,0,0,0,0.210441855886474,0,0,0,0,0.204109497453984,0.2562274405697,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,3.22227665555024,2.29158205375759,3.43706364687375,2.74033007908257,1.5107877947794,1.35004500046361,3.15224842256954,1.81256963593682,1.55328093525546,0.103787347584177,0,0,0,0.419226325255965,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0,0,0.526139422875686,0.543216455383447,0,0.237270036248348,0,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p4@AI854517 | |||
}} |
Revision as of 14:56, 5 August 2015
Short description: | p4@AI854517 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_AI854517_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -38bp_to_NR_040311, NR_040313, NR_040314_5end |
EntrezGene: | 101694 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.10e-08 | 3 |
CNS neuron (sensu Vertebrata) | 5.91e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.91e-07 | 23 |