FFCP PHASE1:Mm9::chr7:94732650..94732683,+: Difference between revisions
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{{FFCP|EntrezGene=108071|HGNC=|MCL_coexpression_id=288|UniProt=B7ZMP7,E9QMC2,Q4VA56,B2BH30,Q3UVX5|association_with_transcript=0bp_to_NM_001081414,NM_001143834,uc009ifp.2,uc009ifr.2,uc009ifs.2_5end|description=CAGE_peak_3_at_Grm5_5end|id=chr7:94732650..94732683,+|ontology_enrichment_celltype=CL:0000117!2.65e-20!23;CL:0000337!2.65e-20!23;CL:0000540!4.96e-12!33;CL:0000047!4.96e-12!33;CL:0000031!4.96e-12!33;CL:0000404!4.96e-12!33;CL:0000393!3.52e-09!39;CL:0000211!3.52e-09!39;CL:0002319!9.44e-08!43;CL:0000221!1.94e-07!44;CL:0000133!1.94e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.21e-19,23;CL:0000337,4.21e-19,23;CL:0000540,3.55e-12,33;CL:0000047,3.55e-12,33;CL:0000031,3.55e-12,33;CL:0000404,3.55e-12,33;CL:0000393,9.60e-10,39;CL:0000211,9.60e-10,39;CL:0002319,1.66e-08,43;CL:0000221,3.10e-08,44;CL:0000133,3.10e-08,44;CL:0002612,4.14e-07,3;CL:0002610,4.78e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.47e-30!34;UBERON:0001049!4.28e-29!52;UBERON:0005068!4.28e-29!52;UBERON:0006241!4.28e-29!52;UBERON:0007135!4.28e-29!52;UBERON:0000955!6.01e-27!50;UBERON:0006238!6.01e-27!50;UBERON:0001017!2.50e-26!73;UBERON:0005743!2.50e-26!73;UBERON:0002616!6.22e-26!49;UBERON:0000073!3.19e-25!75;UBERON:0001016!3.19e-25!75;UBERON:0002791!5.06e-25!29;UBERON:0003528!5.06e-25!29;UBERON:0001893!5.06e-25!29;UBERON:0003080!4.58e-21!40;UBERON:0002780!6.35e-20!39;UBERON:0001890!6.35e-20!39;UBERON:0006240!6.35e-20!39;UBERON:0000033!7.26e-20!63;UBERON:0002346!8.73e-19!71;UBERON:0003075!8.73e-19!71;UBERON:0007284!8.73e-19!71;UBERON:0000956!1.05e-16!21;UBERON:0001869!1.05e-16!21;UBERON:0000203!1.05e-16!21;UBERON:0003056!1.96e-16!49;UBERON:0002619!1.30e-15!17;UBERON:0004121!1.95e-15!102;UBERON:0000924!1.95e-15!102;UBERON:0006601!1.95e-15!102;UBERON:0002021!2.40e-13!10;UBERON:0000411!2.40e-13!10;UBERON:0001950!2.40e-13!10;UBERON:0007811!2.44e-11!86;UBERON:0002420!1.68e-09!8;UBERON:0007245!1.68e-09!8;UBERON:0010009!1.68e-09!8;UBERON:0010011!1.68e-09!8;UBERON:0000454!1.68e-09!8;UBERON:0000153!2.03e-09!94;UBERON:0003076!1.95e-08!12;UBERON:0003057!1.95e-08!12;UBERON:0002240!1.00e-07!6;UBERON:0005174!1.00e-07!6;UBERON:0001137!1.00e-07!6;UBERON:0002298!2.64e-07!6;UBERON:0000369!8.26e-07!5;UBERON:0002435!8.26e-07!5;UBERON:0000204!8.26e-07!5;UBERON:0010082!8.26e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.22e-43,54;UBERON:0002020,1.51e-41,34;UBERON:0001049,1.34e-39,52;UBERON:0005068,1.34e-39,52;UBERON:0006241,1.34e-39,52;UBERON:0007135,1.34e-39,52;UBERON:0001017,4.57e-36,73;UBERON:0001016,6.97e-35,75;UBERON:0003528,2.31e-32,29;UBERON:0002791,2.31e-32,29;UBERON:0001893,2.31e-32,29;UBERON:0000955,5.62e-31,47;UBERON:0006238,5.62e-31,47;UBERON:0002346,1.02e-30,64;UBERON:0003075,1.02e-30,64;UBERON:0007284,1.02e-30,64;UBERON:0003080,1.05e-29,40;UBERON:0002616,2.09e-29,46;UBERON:0002780,7.79e-28,39;UBERON:0001890,7.79e-28,39;UBERON:0006240,7.79e-28,39;UBERON:0002619,1.17e-26,17;UBERON:0010371,5.71e-26,73;UBERON:0004121,8.73e-26,95;UBERON:0000924,8.73e-26,95;UBERON:0006601,8.73e-26,95;UBERON:0000956,5.27e-24,21;UBERON:0001869,5.27e-24,21;UBERON:0000203,5.27e-24,21;UBERON:0003056,4.49e-23,49;UBERON:0002021,5.86e-22,10;UBERON:0000411,5.86e-22,10;UBERON:0001950,5.86e-22,10;UBERON:0010314,5.37e-19,92;UBERON:0000025,7.92e-14,114;UBERON:0004111,2.06e-12,122;UBERON:0002240,3.13e-12,6;UBERON:0005174,3.13e-12,6;UBERON:0001137,3.13e-12,6;UBERON:0001948,2.19e-10,5;UBERON:0002315,2.19e-10,5;UBERON:0003076,7.99e-10,12;UBERON:0003057,7.99e-10,12;UBERON:0002420,2.80e-09,8;UBERON:0007245,2.80e-09,8;UBERON:0010009,2.80e-09,8;UBERON:0010011,2.80e-09,8;UBERON:0000454,2.80e-09,8;UBERON:0011216,2.69e-08,194;UBERON:0000369,1.94e-07,5;UBERON:0002435,1.94e-07,5;UBERON:0000204,1.94e-07,5;UBERON:0010082,1.94e-07,5;UBERON:0001954,3.69e-07,7;UBERON:0003022,3.69e-07,7;UBERON:0002421,3.69e-07,7;UBERON:0000349,3.69e-07,7;UBERON:0002600,3.69e-07,7;UBERON:0002257,4.14e-07,3;UBERON:0004684,4.78e-07,3;UBERON:0002275,4.78e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0,1.71390590642282,2.87129103237098,2.9397791811589,1.82106394934649,1.83843757322004,3.30347642998166,3.06449611404451,3.68655679814984,0.923204014111357,2.37867873366265,1.56274011167028,0.837548997004143,2.25105044012672,2.13917546887534,4.12480019663135,4.41352210477219,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,5.99162557619291,19.6725259212009,14.0732874366408,5.04090528557602,6.13717097592793,5.40248915854856,10.707923362472,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20130799400096,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,6.44455331110048,6.30185064783336,4.81188910562325,3.42541259885321,5.2877572817279,5.40018000185445,4.95353323546643,4.98456649882625,5.1776031175182,0,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.512201219238954,0.746661096422973,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0,0.354951612318675,0.953744759789284,1.0174249164263,0.470546902076653,0.423073039458382,0.914639864363863,0,0.407412341537585,1.12228454331548,0.118635018124174,0.492522411877817,0,0.619747364743864,0.578719832943424,1.24905288968973,0.467863216890817,0.644613162144895,0.191288332068843,0,0|short_description=p3@Grm5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108071 | |||
|HGNC= | |||
|MCL_coexpression_id=288 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B7ZMP7,uniprot:E9QMC2,uniprot:Q4VA56,uniprot:B2BH30,uniprot:Q3UVX5 | |||
|association_with_transcript=0bp_to_NM_001081414,NM_001143834,uc009ifp.2,uc009ifr.2,uc009ifs.2_5end | |||
|cluster_id=chr7:94732650..94732683,+ | |||
|description=CAGE_peak_3_at_Grm5_5end | |||
|id=chr7:94732650..94732683,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.65e-20!23;CL:0000337!2.65e-20!23;CL:0000540!4.96e-12!33;CL:0000047!4.96e-12!33;CL:0000031!4.96e-12!33;CL:0000404!4.96e-12!33;CL:0000393!3.52e-09!39;CL:0000211!3.52e-09!39;CL:0002319!9.44e-08!43;CL:0000221!1.94e-07!44;CL:0000133!1.94e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.21e-19,23;CL:0000337,4.21e-19,23;CL:0000540,3.55e-12,33;CL:0000047,3.55e-12,33;CL:0000031,3.55e-12,33;CL:0000404,3.55e-12,33;CL:0000393,9.60e-10,39;CL:0000211,9.60e-10,39;CL:0002319,1.66e-08,43;CL:0000221,3.10e-08,44;CL:0000133,3.10e-08,44;CL:0002612,4.14e-07,3;CL:0002610,4.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.47e-30!34;UBERON:0001049!4.28e-29!52;UBERON:0005068!4.28e-29!52;UBERON:0006241!4.28e-29!52;UBERON:0007135!4.28e-29!52;UBERON:0000955!6.01e-27!50;UBERON:0006238!6.01e-27!50;UBERON:0001017!2.50e-26!73;UBERON:0005743!2.50e-26!73;UBERON:0002616!6.22e-26!49;UBERON:0000073!3.19e-25!75;UBERON:0001016!3.19e-25!75;UBERON:0002791!5.06e-25!29;UBERON:0003528!5.06e-25!29;UBERON:0001893!5.06e-25!29;UBERON:0003080!4.58e-21!40;UBERON:0002780!6.35e-20!39;UBERON:0001890!6.35e-20!39;UBERON:0006240!6.35e-20!39;UBERON:0000033!7.26e-20!63;UBERON:0002346!8.73e-19!71;UBERON:0003075!8.73e-19!71;UBERON:0007284!8.73e-19!71;UBERON:0000956!1.05e-16!21;UBERON:0001869!1.05e-16!21;UBERON:0000203!1.05e-16!21;UBERON:0003056!1.96e-16!49;UBERON:0002619!1.30e-15!17;UBERON:0004121!1.95e-15!102;UBERON:0000924!1.95e-15!102;UBERON:0006601!1.95e-15!102;UBERON:0002021!2.40e-13!10;UBERON:0000411!2.40e-13!10;UBERON:0001950!2.40e-13!10;UBERON:0007811!2.44e-11!86;UBERON:0002420!1.68e-09!8;UBERON:0007245!1.68e-09!8;UBERON:0010009!1.68e-09!8;UBERON:0010011!1.68e-09!8;UBERON:0000454!1.68e-09!8;UBERON:0000153!2.03e-09!94;UBERON:0003076!1.95e-08!12;UBERON:0003057!1.95e-08!12;UBERON:0002240!1.00e-07!6;UBERON:0005174!1.00e-07!6;UBERON:0001137!1.00e-07!6;UBERON:0002298!2.64e-07!6;UBERON:0000369!8.26e-07!5;UBERON:0002435!8.26e-07!5;UBERON:0000204!8.26e-07!5;UBERON:0010082!8.26e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.22e-43,54;UBERON:0002020,1.51e-41,34;UBERON:0001049,1.34e-39,52;UBERON:0005068,1.34e-39,52;UBERON:0006241,1.34e-39,52;UBERON:0007135,1.34e-39,52;UBERON:0001017,4.57e-36,73;UBERON:0001016,6.97e-35,75;UBERON:0003528,2.31e-32,29;UBERON:0002791,2.31e-32,29;UBERON:0001893,2.31e-32,29;UBERON:0000955,5.62e-31,47;UBERON:0006238,5.62e-31,47;UBERON:0002346,1.02e-30,64;UBERON:0003075,1.02e-30,64;UBERON:0007284,1.02e-30,64;UBERON:0003080,1.05e-29,40;UBERON:0002616,2.09e-29,46;UBERON:0002780,7.79e-28,39;UBERON:0001890,7.79e-28,39;UBERON:0006240,7.79e-28,39;UBERON:0002619,1.17e-26,17;UBERON:0010371,5.71e-26,73;UBERON:0004121,8.73e-26,95;UBERON:0000924,8.73e-26,95;UBERON:0006601,8.73e-26,95;UBERON:0000956,5.27e-24,21;UBERON:0001869,5.27e-24,21;UBERON:0000203,5.27e-24,21;UBERON:0003056,4.49e-23,49;UBERON:0002021,5.86e-22,10;UBERON:0000411,5.86e-22,10;UBERON:0001950,5.86e-22,10;UBERON:0010314,5.37e-19,92;UBERON:0000025,7.92e-14,114;UBERON:0004111,2.06e-12,122;UBERON:0002240,3.13e-12,6;UBERON:0005174,3.13e-12,6;UBERON:0001137,3.13e-12,6;UBERON:0001948,2.19e-10,5;UBERON:0002315,2.19e-10,5;UBERON:0003076,7.99e-10,12;UBERON:0003057,7.99e-10,12;UBERON:0002420,2.80e-09,8;UBERON:0007245,2.80e-09,8;UBERON:0010009,2.80e-09,8;UBERON:0010011,2.80e-09,8;UBERON:0000454,2.80e-09,8;UBERON:0011216,2.69e-08,194;UBERON:0000369,1.94e-07,5;UBERON:0002435,1.94e-07,5;UBERON:0000204,1.94e-07,5;UBERON:0010082,1.94e-07,5;UBERON:0001954,3.69e-07,7;UBERON:0003022,3.69e-07,7;UBERON:0002421,3.69e-07,7;UBERON:0000349,3.69e-07,7;UBERON:0002600,3.69e-07,7;UBERON:0002257,4.14e-07,3;UBERON:0004684,4.78e-07,3;UBERON:0002275,4.78e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0,1.71390590642282,2.87129103237098,2.9397791811589,1.82106394934649,1.83843757322004,3.30347642998166,3.06449611404451,3.68655679814984,0.923204014111357,2.37867873366265,1.56274011167028,0.837548997004143,2.25105044012672,2.13917546887534,4.12480019663135,4.41352210477219,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,5.99162557619291,19.6725259212009,14.0732874366408,5.04090528557602,6.13717097592793,5.40248915854856,10.707923362472,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.20130799400096,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,6.44455331110048,6.30185064783336,4.81188910562325,3.42541259885321,5.2877572817279,5.40018000185445,4.95353323546643,4.98456649882625,5.1776031175182,0,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.512201219238954,0.746661096422973,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,0,0.354951612318675,0.953744759789284,1.0174249164263,0.470546902076653,0.423073039458382,0.914639864363863,0,0.407412341537585,1.12228454331548,0.118635018124174,0.492522411877817,0,0.619747364743864,0.578719832943424,1.24905288968973,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p3@Grm5 | |||
}} |
Revision as of 17:23, 5 August 2015
Short description: | p3@Grm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Grm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:288 |
Association with transcript: | 0bp_to_NM_001081414, NM_001143834, uc009ifp.2, uc009ifr.2, uc009ifs.2_5end |
EntrezGene: | 108071 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.21e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.21e-19 | 23 |
neuron | 3.55e-12 | 33 |
neuronal stem cell | 3.55e-12 | 33 |
neuroblast | 3.55e-12 | 33 |
electrically signaling cell | 3.55e-12 | 33 |
electrically responsive cell | 9.60e-10 | 39 |
electrically active cell | 9.60e-10 | 39 |
neural cell | 1.66e-08 | 43 |
ectodermal cell | 3.10e-08 | 44 |
neurectodermal cell | 3.10e-08 | 44 |
neuron of the ventral spinal cord | 4.14e-07 | 3 |
raphe nuclei neuron | 4.78e-07 | 3 |