FFCP PHASE1:Mm9::chr8:119927722..119927758,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=278|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:119927722..119927758,+|id=chr8:119927722..119927758,+|ontology_enrichment_celltype=CL:0000117!9.14e-12!23;CL:0000337!9.14e-12!23;CL:0000540!5.58e-07!33;CL:0000047!5.58e-07!33;CL:0000031!5.58e-07!33;CL:0000404!5.58e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.69e-15,23;CL:0000337,3.69e-15,23;CL:0000540,3.29e-10,33;CL:0000047,3.29e-10,33;CL:0000031,3.29e-10,33;CL:0000404,3.29e-10,33;CL:0000221,4.95e-08,44;CL:0000133,4.95e-08,44;CL:0000393,8.08e-08,39;CL:0000211,8.08e-08,39;CL:0002319,2.11e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.28e-22!71;UBERON:0003075!2.28e-22!71;UBERON:0007284!2.28e-22!71;UBERON:0001049!7.12e-21!52;UBERON:0005068!7.12e-21!52;UBERON:0006241!7.12e-21!52;UBERON:0007135!7.12e-21!52;UBERON:0000033!3.49e-20!63;UBERON:0000955!5.21e-20!50;UBERON:0006238!5.21e-20!50;UBERON:0001017!2.01e-19!73;UBERON:0005743!2.01e-19!73;UBERON:0002616!2.97e-19!49;UBERON:0003080!2.97e-19!40;UBERON:0003056!3.09e-19!49;UBERON:0004121!4.88e-19!102;UBERON:0000924!4.88e-19!102;UBERON:0006601!4.88e-19!102;UBERON:0002780!1.78e-18!39;UBERON:0001890!1.78e-18!39;UBERON:0006240!1.78e-18!39;UBERON:0000073!3.06e-18!75;UBERON:0001016!3.06e-18!75;UBERON:0002020!4.51e-17!34;UBERON:0002791!5.70e-14!29;UBERON:0003528!5.70e-14!29;UBERON:0001893!5.70e-14!29;UBERON:0007811!2.17e-11!86;UBERON:0000153!2.93e-09!94;UBERON:0002619!5.25e-09!17;UBERON:0002021!1.22e-08!10;UBERON:0000411!1.22e-08!10;UBERON:0001950!1.22e-08!10;UBERON:0000956!1.25e-08!21;UBERON:0001869!1.25e-08!21;UBERON:0000203!1.25e-08!21;UBERON:0002420!5.76e-07!8;UBERON:0007245!5.76e-07!8;UBERON:0010009!5.76e-07!8;UBERON:0010011!5.76e-07!8;UBERON:0000454!5.76e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.81e-36,54;UBERON:0001049,5.07e-33,52;UBERON:0005068,5.07e-33,52;UBERON:0006241,5.07e-33,52;UBERON:0007135,5.07e-33,52;UBERON:0001017,6.44e-32,73;UBERON:0001016,1.12e-30,75;UBERON:0003080,1.75e-29,40;UBERON:0000955,3.21e-29,47;UBERON:0006238,3.21e-29,47;UBERON:0002780,3.58e-28,39;UBERON:0001890,3.58e-28,39;UBERON:0006240,3.58e-28,39;UBERON:0002616,5.85e-28,46;UBERON:0002020,5.26e-25,34;UBERON:0002346,1.84e-24,64;UBERON:0003075,1.84e-24,64;UBERON:0007284,1.84e-24,64;UBERON:0010371,1.20e-22,73;UBERON:0004121,2.06e-22,95;UBERON:0000924,2.06e-22,95;UBERON:0006601,2.06e-22,95;UBERON:0003056,4.05e-22,49;UBERON:0003528,3.93e-21,29;UBERON:0002791,3.93e-21,29;UBERON:0001893,3.93e-21,29;UBERON:0010314,2.59e-20,92;UBERON:0002619,8.23e-14,17;UBERON:0002021,1.04e-13,10;UBERON:0000411,1.04e-13,10;UBERON:0001950,1.04e-13,10;UBERON:0000956,3.48e-12,21;UBERON:0001869,3.48e-12,21;UBERON:0000203,3.48e-12,21;UBERON:0002420,7.63e-11,8;UBERON:0007245,7.63e-11,8;UBERON:0010009,7.63e-11,8;UBERON:0010011,7.63e-11,8;UBERON:0000454,7.63e-11,8;UBERON:0004111,6.35e-10,122;UBERON:0000025,7.09e-10,114;UBERON:0001894,8.53e-08,10;UBERON:0006222,8.53e-08,10;UBERON:0002950,6.71e-07,4;UBERON:0001891,6.71e-07,4;UBERON:0009616,6.71e-07,4;UBERON:0010286,6.71e-07,4;UBERON:0000369,8.18e-07,5;UBERON:0002435,8.18e-07,5;UBERON:0000204,8.18e-07,5;UBERON:0010082,8.18e-07,5|phase1_expression=4.96461426024861,0,0,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,11.4260393761521,13.693849539,4.5321595709533,3.06705507258356,3.67687514644008,5.50579404996943,7.40586560894089,7.52672012955593,2.90149833006426,2.92760459527711,2.6045668527838,8.65467296904281,16.8828783009504,14.3630352910202,4.12480019663135,7.11858403995515,0.559198337475902,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,3.66192891419369,0,0,0,0,0,0,0.22836775943812,0,1.7813056687779,0.867426633830679,1.82679286987285,1.15307748628029,1.05505848386836,1.88141931417128,0.753999547978053,0,0,0,0.647067399789637,0,0,0,0,0,0,0,0,0,8.98743836428936,9.15001205637253,15.3298309577695,7.47444576826789,6.39288643325826,7.2725815595846,11.5191296778108,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.640568601424249,0.468508622798644,0.776110112217047,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0,6.09840850835969,0.720332286654991,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.22237804384487,0.570676878337677,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.49095073923223,0.126473074248515,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,4.0137647496948,5.62616095642575,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,8.67567554338879,0.425820255624806,0,0,1.48473110675282,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0,0,0,0,0,19.7454971337197,0,0.388076051348264,1.71469628025274,5.67488747655275,4.10248280484762,4.44282355625727,4.26250928760439,0,0,0.220528398054962,0,0.322928853391811,0.120625849856312,0,0,0,2.41052892613663,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.406638934253697,0,0.418176592028937,0.436725127492355,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,11.8597886949584,11.9684561491866,10.3121192419091,7.38968684077857,6.16574267793578,9.82012066606611,8.77529250301348,6.30449684513909,6.34399372577886,4.65984280576638,0,0.399024873401031,0.512200817262403,0.243106717068294,1.04806581313991,0.919217542250071,1.55572709461131,0.412070114477788,2.24643446714271,2.02157769411038,1.01391719956096,1.32038438970253,0.749132059759059,0.640251524048693,0.631790158511746,0.952587382566147,0.463537303779422,0.578727661391115,2.88460130562315,1.03039244094078,2.05721551431249,1.77475806159337,1.1921809497366,1.59881058295561,0.941093804153306,1.18460451048347,0.548783918618318,1.31534855718921,1.08643291076689,2.80571135828869,0.474540072496697,0.29551344712669,0.818462086339379,0.929621047115796,0.964533054905707,2.99772693525535,0.701794825336225,1.50409737833809,1.14772999241306,0.441182838239031,0|short_description=p@chr8:119927722..119927758,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=278 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:119927722..119927758,+ | |||
|description=CAGE_peak_at_chr8:119927722..119927758,+ | |||
|id=chr8:119927722..119927758,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.14e-12!23;CL:0000337!9.14e-12!23;CL:0000540!5.58e-07!33;CL:0000047!5.58e-07!33;CL:0000031!5.58e-07!33;CL:0000404!5.58e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.69e-15,23;CL:0000337,3.69e-15,23;CL:0000540,3.29e-10,33;CL:0000047,3.29e-10,33;CL:0000031,3.29e-10,33;CL:0000404,3.29e-10,33;CL:0000221,4.95e-08,44;CL:0000133,4.95e-08,44;CL:0000393,8.08e-08,39;CL:0000211,8.08e-08,39;CL:0002319,2.11e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.28e-22!71;UBERON:0003075!2.28e-22!71;UBERON:0007284!2.28e-22!71;UBERON:0001049!7.12e-21!52;UBERON:0005068!7.12e-21!52;UBERON:0006241!7.12e-21!52;UBERON:0007135!7.12e-21!52;UBERON:0000033!3.49e-20!63;UBERON:0000955!5.21e-20!50;UBERON:0006238!5.21e-20!50;UBERON:0001017!2.01e-19!73;UBERON:0005743!2.01e-19!73;UBERON:0002616!2.97e-19!49;UBERON:0003080!2.97e-19!40;UBERON:0003056!3.09e-19!49;UBERON:0004121!4.88e-19!102;UBERON:0000924!4.88e-19!102;UBERON:0006601!4.88e-19!102;UBERON:0002780!1.78e-18!39;UBERON:0001890!1.78e-18!39;UBERON:0006240!1.78e-18!39;UBERON:0000073!3.06e-18!75;UBERON:0001016!3.06e-18!75;UBERON:0002020!4.51e-17!34;UBERON:0002791!5.70e-14!29;UBERON:0003528!5.70e-14!29;UBERON:0001893!5.70e-14!29;UBERON:0007811!2.17e-11!86;UBERON:0000153!2.93e-09!94;UBERON:0002619!5.25e-09!17;UBERON:0002021!1.22e-08!10;UBERON:0000411!1.22e-08!10;UBERON:0001950!1.22e-08!10;UBERON:0000956!1.25e-08!21;UBERON:0001869!1.25e-08!21;UBERON:0000203!1.25e-08!21;UBERON:0002420!5.76e-07!8;UBERON:0007245!5.76e-07!8;UBERON:0010009!5.76e-07!8;UBERON:0010011!5.76e-07!8;UBERON:0000454!5.76e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.81e-36,54;UBERON:0001049,5.07e-33,52;UBERON:0005068,5.07e-33,52;UBERON:0006241,5.07e-33,52;UBERON:0007135,5.07e-33,52;UBERON:0001017,6.44e-32,73;UBERON:0001016,1.12e-30,75;UBERON:0003080,1.75e-29,40;UBERON:0000955,3.21e-29,47;UBERON:0006238,3.21e-29,47;UBERON:0002780,3.58e-28,39;UBERON:0001890,3.58e-28,39;UBERON:0006240,3.58e-28,39;UBERON:0002616,5.85e-28,46;UBERON:0002020,5.26e-25,34;UBERON:0002346,1.84e-24,64;UBERON:0003075,1.84e-24,64;UBERON:0007284,1.84e-24,64;UBERON:0010371,1.20e-22,73;UBERON:0004121,2.06e-22,95;UBERON:0000924,2.06e-22,95;UBERON:0006601,2.06e-22,95;UBERON:0003056,4.05e-22,49;UBERON:0003528,3.93e-21,29;UBERON:0002791,3.93e-21,29;UBERON:0001893,3.93e-21,29;UBERON:0010314,2.59e-20,92;UBERON:0002619,8.23e-14,17;UBERON:0002021,1.04e-13,10;UBERON:0000411,1.04e-13,10;UBERON:0001950,1.04e-13,10;UBERON:0000956,3.48e-12,21;UBERON:0001869,3.48e-12,21;UBERON:0000203,3.48e-12,21;UBERON:0002420,7.63e-11,8;UBERON:0007245,7.63e-11,8;UBERON:0010009,7.63e-11,8;UBERON:0010011,7.63e-11,8;UBERON:0000454,7.63e-11,8;UBERON:0004111,6.35e-10,122;UBERON:0000025,7.09e-10,114;UBERON:0001894,8.53e-08,10;UBERON:0006222,8.53e-08,10;UBERON:0002950,6.71e-07,4;UBERON:0001891,6.71e-07,4;UBERON:0009616,6.71e-07,4;UBERON:0010286,6.71e-07,4;UBERON:0000369,8.18e-07,5;UBERON:0002435,8.18e-07,5;UBERON:0000204,8.18e-07,5;UBERON:0010082,8.18e-07,5 | |||
|phase1_expression=4.96461426024861,0,0,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,11.4260393761521,13.693849539,4.5321595709533,3.06705507258356,3.67687514644008,5.50579404996943,7.40586560894089,7.52672012955593,2.90149833006426,2.92760459527711,2.6045668527838,8.65467296904281,16.8828783009504,14.3630352910202,4.12480019663135,7.11858403995515,0.559198337475902,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,3.66192891419369,0,0,0,0,0,0,0.22836775943812,0,1.7813056687779,0.867426633830679,1.82679286987285,1.15307748628029,1.05505848386836,1.88141931417128,0.753999547978053,0,0,0,0.647067399789637,0,0,0,0,0,0,0,0,0,8.98743836428936,9.15001205637253,15.3298309577695,7.47444576826789,6.39288643325826,7.2725815595846,11.5191296778108,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.640568601424249,0.468508622798644,0.776110112217047,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0,0,6.09840850835969,0.720332286654991,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.22237804384487,0.570676878337677,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.49095073923223,0.126473074248515,0.295220295959204,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,4.0137647496948,5.62616095642575,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,8.67567554338879,0.425820255624806,0,0,1.48473110675282,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0,0,0,0,0,19.7454971337197,0,0.388076051348264,1.71469628025274,5.67488747655275,4.10248280484762,4.44282355625727,4.26250928760439,0,0,0.220528398054962,0,0.322928853391811,0.120625849856312,0,0,0,2.41052892613663,0.170870880797853,0,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.406638934253697,0,0.418176592028937,0.436725127492355,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,11.8597886949584,11.9684561491866,10.3121192419091,7.38968684077857,6.16574267793578,9.82012066606611,8.77529250301348,6.30449684513909,6.34399372577886,4.65984280576638,0,0.399024873401031,0.512200817262403,0.243106717068294,1.04806581313991,0.919217542250071,1.55572709461131,0.412070114477788,2.24643446714271,2.02157769411038,1.01391719956096,1.32038438970253,0.749132059759059,0.640251524048693,0.631790158511746,0.952587382566147,0.463537303779422,0.578727661391115,2.88460130562315,1.03039244094078,2.05721551431249,1.77475806159337,1.1921809497366,1.59881058295561,0.941093804153306,1.18460451048347,0.548783918618318,1.31534855718921,1.08643291076689,2.80571135828869,0.474540072496697,0.29551344712669,0.818462086339379,0.929621047115796,0.964533054905707,2.99772693525535,0.701794825336225,1.50409737833809,1.14772999241306,0.441182838239031,0 | |||
|short_description=p@chr8:119927722..119927758,+ | |||
}} |
Latest revision as of 00:16, 6 August 2015
Short description: | p@chr8:119927722..119927758, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:119927722..119927758, + |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.69e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.69e-15 | 23 |
neuron | 3.29e-10 | 33 |
neuronal stem cell | 3.29e-10 | 33 |
neuroblast | 3.29e-10 | 33 |
electrically signaling cell | 3.29e-10 | 33 |
ectodermal cell | 4.95e-08 | 44 |
neurectodermal cell | 4.95e-08 | 44 |
electrically responsive cell | 8.08e-08 | 39 |
electrically active cell | 8.08e-08 | 39 |
neural cell | 2.11e-07 | 43 |