FFCP PHASE1:Mm9::chr9:4795951..4795964,-: Difference between revisions
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{{FFCP|EntrezGene=14802|HGNC=|MCL_coexpression_id=30|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069|association_with_transcript=269bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end|description=CAGE_peak_12_at_Gria4_5end|id=chr9:4795951..4795964,-|ontology_enrichment_celltype=CL:0000540!2.62e-18!33;CL:0000047!2.62e-18!33;CL:0000031!2.62e-18!33;CL:0000404!2.62e-18!33;CL:0000393!3.35e-16!39;CL:0000211!3.35e-16!39;CL:0000221!2.15e-13!44;CL:0000133!2.15e-13!44;CL:0002319!5.77e-13!43;CL:0000055!1.77e-11!50;CL:0000117!6.37e-11!23;CL:0000337!6.37e-11!23;CL:0000107!4.34e-10!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.56e-15,33;CL:0000047,1.56e-15,33;CL:0000031,1.56e-15,33;CL:0000404,1.56e-15,33;CL:0000393,1.04e-12,39;CL:0000211,1.04e-12,39;CL:0000107,3.87e-12,9;CL:0002319,2.89e-11,43;CL:0000221,6.03e-11,44;CL:0000133,6.03e-11,44;CL:0002614,2.51e-09,3;CL:0000117,2.69e-07,23;CL:0000337,2.69e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.09e-31!73;UBERON:0005743!1.09e-31!73;UBERON:0000073!2.44e-30!75;UBERON:0001016!2.44e-30!75;UBERON:0004121!1.96e-28!102;UBERON:0000924!1.96e-28!102;UBERON:0006601!1.96e-28!102;UBERON:0002346!4.38e-24!71;UBERON:0003075!4.38e-24!71;UBERON:0007284!4.38e-24!71;UBERON:0001049!5.44e-20!52;UBERON:0005068!5.44e-20!52;UBERON:0006241!5.44e-20!52;UBERON:0007135!5.44e-20!52;UBERON:0000033!4.04e-19!63;UBERON:0000955!1.48e-18!50;UBERON:0006238!1.48e-18!50;UBERON:0002616!1.40e-17!49;UBERON:0002020!1.22e-15!34;UBERON:0003056!3.70e-14!49;UBERON:0003080!1.77e-12!40;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0002791!1.53e-11!29;UBERON:0003528!1.53e-11!29;UBERON:0001893!1.53e-11!29;UBERON:0007811!2.07e-10!86;UBERON:0002410!4.34e-10!9;UBERON:0003076!7.94e-09!12;UBERON:0003057!7.94e-09!12;UBERON:0000153!1.77e-08!94;UBERON:0002420!7.12e-08!8;UBERON:0007245!7.12e-08!8;UBERON:0010009!7.12e-08!8;UBERON:0010011!7.12e-08!8;UBERON:0000454!7.12e-08!8;UBERON:0000010!9.48e-08!11;UBERON:0002298!2.81e-07!6;UBERON:0002021!7.19e-07!10;UBERON:0000411!7.19e-07!10;UBERON:0001950!7.19e-07!10;UBERON:0002240!7.28e-07!6;UBERON:0005174!7.28e-07!6;UBERON:0001137!7.28e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0000073,1.93e-21,54;UBERON:0002346,2.50e-21,64;UBERON:0003075,2.50e-21,64;UBERON:0007284,2.50e-21,64;UBERON:0001049,5.03e-20,52;UBERON:0005068,5.03e-20,52;UBERON:0006241,5.03e-20,52;UBERON:0007135,5.03e-20,52;UBERON:0010371,3.86e-18,73;UBERON:0000955,6.53e-18,47;UBERON:0006238,6.53e-18,47;UBERON:0002616,4.26e-16,46;UBERON:0010314,1.89e-13,92;UBERON:0002020,7.66e-13,34;UBERON:0003076,1.41e-12,12;UBERON:0003057,1.41e-12,12;UBERON:0002410,3.87e-12,9;UBERON:0002950,9.82e-12,4;UBERON:0001891,9.82e-12,4;UBERON:0009616,9.82e-12,4;UBERON:0010286,9.82e-12,4;UBERON:0003528,8.84e-11,29;UBERON:0002791,8.84e-11,29;UBERON:0001893,8.84e-11,29;UBERON:0003080,2.76e-10,40;UBERON:0000010,8.04e-10,11;UBERON:0010313,1.03e-09,3;UBERON:0002342,1.03e-09,3;UBERON:0002005,1.03e-09,3;UBERON:0005428,1.03e-09,3;UBERON:0005062,1.03e-09,3;UBERON:0002038,2.51e-09,3;UBERON:0009663,2.51e-09,3;UBERON:0009661,2.51e-09,3;UBERON:0000125,2.51e-09,3;UBERON:0002308,2.51e-09,3;UBERON:0002420,3.50e-09,8;UBERON:0007245,3.50e-09,8;UBERON:0010009,3.50e-09,8;UBERON:0010011,3.50e-09,8;UBERON:0000454,3.50e-09,8;UBERON:0004733,3.54e-09,6;UBERON:0004732,3.54e-09,6;UBERON:0002028,3.54e-09,6;UBERON:0007277,3.54e-09,6;UBERON:0002780,5.22e-09,39;UBERON:0001890,5.22e-09,39;UBERON:0006240,5.22e-09,39;UBERON:0011216,1.08e-08,194;UBERON:0003056,6.13e-08,49;UBERON:0002021,8.17e-08,10;UBERON:0000411,8.17e-08,10;UBERON:0001950,8.17e-08,10;UBERON:0001896,2.60e-07,2;UBERON:0002298,2.60e-07,2;UBERON:0005290,2.60e-07,2;UBERON:0010096,2.60e-07,2;UBERON:0000025,6.52e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0.856952953211411,0.441737081903227,0.244981598429908,0,0,3.30347642998166,1.14918604276669,0.921639199537461,0.131886287730194,0.274462930807229,1.04182674111352,1.3959149950069,1.12552522006336,1.22238598221448,1.47314292736834,2.13557521198654,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,9.66176630138106,8.79676168616511,0,0,0,0,1.04853447583376,2.74500361691176,0.502617408451458,1.21677024134594,0.511430914660661,0.62336413367868,1.29793010454206,0.203678727700633,0,0,0,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.561086559122548,0.189709611372772,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.40654023910644,0,0,1.26203287766503,1.95219372148319,1.29254038639679,0.955875191810208,0.668396022247182,1.41538265394416,0.809621403349789,1.75353514746787,2.37172666767914,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,1.38097570952153,2.29158205375759,0.859265911718438,0,0.755393897389701,0,0.900642406448441,1.35942722695261,2.07104124700728,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0,0,0,0.476872379894642,0,0,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p12@Gria4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14802 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E863,uniprot:Q9Z2W8,uniprot:E9PX01,uniprot:Q8C069 | |||
|association_with_transcript=269bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end | |||
|cluster_id=chr9:4795951..4795964,- | |||
|description=CAGE_peak_12_at_Gria4_5end | |||
|id=chr9:4795951..4795964,- | |||
|ontology_enrichment_celltype=CL:0000540!2.62e-18!33;CL:0000047!2.62e-18!33;CL:0000031!2.62e-18!33;CL:0000404!2.62e-18!33;CL:0000393!3.35e-16!39;CL:0000211!3.35e-16!39;CL:0000221!2.15e-13!44;CL:0000133!2.15e-13!44;CL:0002319!5.77e-13!43;CL:0000055!1.77e-11!50;CL:0000117!6.37e-11!23;CL:0000337!6.37e-11!23;CL:0000107!4.34e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.56e-15,33;CL:0000047,1.56e-15,33;CL:0000031,1.56e-15,33;CL:0000404,1.56e-15,33;CL:0000393,1.04e-12,39;CL:0000211,1.04e-12,39;CL:0000107,3.87e-12,9;CL:0002319,2.89e-11,43;CL:0000221,6.03e-11,44;CL:0000133,6.03e-11,44;CL:0002614,2.51e-09,3;CL:0000117,2.69e-07,23;CL:0000337,2.69e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.09e-31!73;UBERON:0005743!1.09e-31!73;UBERON:0000073!2.44e-30!75;UBERON:0001016!2.44e-30!75;UBERON:0004121!1.96e-28!102;UBERON:0000924!1.96e-28!102;UBERON:0006601!1.96e-28!102;UBERON:0002346!4.38e-24!71;UBERON:0003075!4.38e-24!71;UBERON:0007284!4.38e-24!71;UBERON:0001049!5.44e-20!52;UBERON:0005068!5.44e-20!52;UBERON:0006241!5.44e-20!52;UBERON:0007135!5.44e-20!52;UBERON:0000033!4.04e-19!63;UBERON:0000955!1.48e-18!50;UBERON:0006238!1.48e-18!50;UBERON:0002616!1.40e-17!49;UBERON:0002020!1.22e-15!34;UBERON:0003056!3.70e-14!49;UBERON:0003080!1.77e-12!40;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0002791!1.53e-11!29;UBERON:0003528!1.53e-11!29;UBERON:0001893!1.53e-11!29;UBERON:0007811!2.07e-10!86;UBERON:0002410!4.34e-10!9;UBERON:0003076!7.94e-09!12;UBERON:0003057!7.94e-09!12;UBERON:0000153!1.77e-08!94;UBERON:0002420!7.12e-08!8;UBERON:0007245!7.12e-08!8;UBERON:0010009!7.12e-08!8;UBERON:0010011!7.12e-08!8;UBERON:0000454!7.12e-08!8;UBERON:0000010!9.48e-08!11;UBERON:0002298!2.81e-07!6;UBERON:0002021!7.19e-07!10;UBERON:0000411!7.19e-07!10;UBERON:0001950!7.19e-07!10;UBERON:0002240!7.28e-07!6;UBERON:0005174!7.28e-07!6;UBERON:0001137!7.28e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0000073,1.93e-21,54;UBERON:0002346,2.50e-21,64;UBERON:0003075,2.50e-21,64;UBERON:0007284,2.50e-21,64;UBERON:0001049,5.03e-20,52;UBERON:0005068,5.03e-20,52;UBERON:0006241,5.03e-20,52;UBERON:0007135,5.03e-20,52;UBERON:0010371,3.86e-18,73;UBERON:0000955,6.53e-18,47;UBERON:0006238,6.53e-18,47;UBERON:0002616,4.26e-16,46;UBERON:0010314,1.89e-13,92;UBERON:0002020,7.66e-13,34;UBERON:0003076,1.41e-12,12;UBERON:0003057,1.41e-12,12;UBERON:0002410,3.87e-12,9;UBERON:0002950,9.82e-12,4;UBERON:0001891,9.82e-12,4;UBERON:0009616,9.82e-12,4;UBERON:0010286,9.82e-12,4;UBERON:0003528,8.84e-11,29;UBERON:0002791,8.84e-11,29;UBERON:0001893,8.84e-11,29;UBERON:0003080,2.76e-10,40;UBERON:0000010,8.04e-10,11;UBERON:0010313,1.03e-09,3;UBERON:0002342,1.03e-09,3;UBERON:0002005,1.03e-09,3;UBERON:0005428,1.03e-09,3;UBERON:0005062,1.03e-09,3;UBERON:0002038,2.51e-09,3;UBERON:0009663,2.51e-09,3;UBERON:0009661,2.51e-09,3;UBERON:0000125,2.51e-09,3;UBERON:0002308,2.51e-09,3;UBERON:0002420,3.50e-09,8;UBERON:0007245,3.50e-09,8;UBERON:0010009,3.50e-09,8;UBERON:0010011,3.50e-09,8;UBERON:0000454,3.50e-09,8;UBERON:0004733,3.54e-09,6;UBERON:0004732,3.54e-09,6;UBERON:0002028,3.54e-09,6;UBERON:0007277,3.54e-09,6;UBERON:0002780,5.22e-09,39;UBERON:0001890,5.22e-09,39;UBERON:0006240,5.22e-09,39;UBERON:0011216,1.08e-08,194;UBERON:0003056,6.13e-08,49;UBERON:0002021,8.17e-08,10;UBERON:0000411,8.17e-08,10;UBERON:0001950,8.17e-08,10;UBERON:0001896,2.60e-07,2;UBERON:0002298,2.60e-07,2;UBERON:0005290,2.60e-07,2;UBERON:0010096,2.60e-07,2;UBERON:0000025,6.52e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0.856952953211411,0.441737081903227,0.244981598429908,0,0,3.30347642998166,1.14918604276669,0.921639199537461,0.131886287730194,0.274462930807229,1.04182674111352,1.3959149950069,1.12552522006336,1.22238598221448,1.47314292736834,2.13557521198654,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,9.66176630138106,8.79676168616511,0,0,0,0,1.04853447583376,2.74500361691176,0.502617408451458,1.21677024134594,0.511430914660661,0.62336413367868,1.29793010454206,0.203678727700633,0,0,0,0,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.374806898238915,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.561086559122548,0.189709611372772,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.40654023910644,0,0,1.26203287766503,1.95219372148319,1.29254038639679,0.955875191810208,0.668396022247182,1.41538265394416,0.809621403349789,1.75353514746787,2.37172666767914,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,1.38097570952153,2.29158205375759,0.859265911718438,0,0.755393897389701,0,0.900642406448441,1.35942722695261,2.07104124700728,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0,0,0,0.476872379894642,0,0,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p12@Gria4 | |||
}} |
Revision as of 06:03, 5 August 2015
Short description: | p12@Gria4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Gria4_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 269bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end |
EntrezGene: | 14802 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.56e-15 | 33 |
neuronal stem cell | 1.56e-15 | 33 |
neuroblast | 1.56e-15 | 33 |
electrically signaling cell | 1.56e-15 | 33 |
electrically responsive cell | 1.04e-12 | 39 |
electrically active cell | 1.04e-12 | 39 |
autonomic neuron | 3.87e-12 | 9 |
neural cell | 2.89e-11 | 43 |
ectodermal cell | 6.03e-11 | 44 |
neurectodermal cell | 6.03e-11 | 44 |
neuron of the substantia nigra | 2.51e-09 | 3 |
CNS neuron (sensu Vertebrata) | 2.69e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-07 | 23 |