FFCP PHASE1:Mm9::chrX:108009761..108009788,+: Difference between revisions
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{{FFCP|EntrezGene=18994|HGNC=|MCL_coexpression_id=1857|UniProt=A6H6L6,P62515|association_with_transcript=-15bp_to_NM_008901,uc009ucv.1_5end|description=CAGE_peak_1_at_Pou3f4_5end|id=chrX:108009761..108009788,+|ontology_enrichment_celltype=CL:0000221!2.58e-21!44;CL:0000133!2.58e-21!44;CL:0002319!7.51e-21!43;CL:0000540!9.36e-18!33;CL:0000047!9.36e-18!33;CL:0000031!9.36e-18!33;CL:0000404!9.36e-18!33;CL:0000117!2.26e-16!23;CL:0000337!2.26e-16!23;CL:0000055!4.40e-15!50;CL:0000393!1.49e-12!39;CL:0000211!1.49e-12!39;CL:0002321!6.81e-07!70;CL:0000220!6.81e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.12e-22,44;CL:0000133,1.12e-22,44;CL:0002319,4.10e-22,43;CL:0000117,7.82e-20,23;CL:0000337,7.82e-20,23;CL:0000540,1.60e-19,33;CL:0000047,1.60e-19,33;CL:0000031,1.60e-19,33;CL:0000404,1.60e-19,33;CL:0000393,1.20e-14,39;CL:0000211,1.20e-14,39;CL:0002321,6.09e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.57e-38!73;UBERON:0005743!1.57e-38!73;UBERON:0000073!4.14e-38!75;UBERON:0001016!4.14e-38!75;UBERON:0004121!1.56e-29!102;UBERON:0000924!1.56e-29!102;UBERON:0006601!1.56e-29!102;UBERON:0001049!2.24e-27!52;UBERON:0005068!2.24e-27!52;UBERON:0006241!2.24e-27!52;UBERON:0007135!2.24e-27!52;UBERON:0000955!1.52e-26!50;UBERON:0006238!1.52e-26!50;UBERON:0002616!9.00e-26!49;UBERON:0000033!4.71e-25!63;UBERON:0002346!3.00e-22!71;UBERON:0003075!3.00e-22!71;UBERON:0007284!3.00e-22!71;UBERON:0003080!1.35e-21!40;UBERON:0002780!6.58e-21!39;UBERON:0001890!6.58e-21!39;UBERON:0006240!6.58e-21!39;UBERON:0003056!1.26e-19!49;UBERON:0002020!9.53e-19!34;UBERON:0002791!8.02e-16!29;UBERON:0003528!8.02e-16!29;UBERON:0001893!8.02e-16!29;UBERON:0007811!1.07e-12!86;UBERON:0000153!3.33e-12!94;UBERON:0000956!2.30e-10!21;UBERON:0001869!2.30e-10!21;UBERON:0000203!2.30e-10!21;UBERON:0002619!2.83e-08!17;UBERON:0002420!7.10e-07!8;UBERON:0007245!7.10e-07!8;UBERON:0010009!7.10e-07!8;UBERON:0010011!7.10e-07!8;UBERON:0000454!7.10e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.11e-45,73;UBERON:0001016,4.33e-43,75;UBERON:0000073,1.96e-35,54;UBERON:0001049,1.97e-33,52;UBERON:0005068,1.97e-33,52;UBERON:0006241,1.97e-33,52;UBERON:0007135,1.97e-33,52;UBERON:0000955,9.01e-30,47;UBERON:0006238,9.01e-30,47;UBERON:0004121,1.30e-29,95;UBERON:0000924,1.30e-29,95;UBERON:0006601,1.30e-29,95;UBERON:0002616,7.77e-29,46;UBERON:0002346,2.06e-26,64;UBERON:0003075,2.06e-26,64;UBERON:0007284,2.06e-26,64;UBERON:0003080,2.76e-26,40;UBERON:0002780,1.95e-25,39;UBERON:0001890,1.95e-25,39;UBERON:0006240,1.95e-25,39;UBERON:0010371,2.67e-23,73;UBERON:0002020,9.13e-23,34;UBERON:0003528,3.74e-19,29;UBERON:0002791,3.74e-19,29;UBERON:0001893,3.74e-19,29;UBERON:0003056,1.41e-18,49;UBERON:0010314,2.40e-14,92;UBERON:0000956,2.03e-12,21;UBERON:0001869,2.03e-12,21;UBERON:0000203,2.03e-12,21;UBERON:0002619,7.63e-10,17;UBERON:0002420,4.02e-08,8;UBERON:0007245,4.02e-08,8;UBERON:0010009,4.02e-08,8;UBERON:0010011,4.02e-08,8;UBERON:0000454,4.02e-08,8;UBERON:0003076,1.88e-07,12;UBERON:0003057,1.88e-07,12;UBERON:0001894,4.00e-07,10;UBERON:0006222,4.00e-07,10|phase1_expression=245.348033764544,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,5.71527606113668,7.99584223859941,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,15.4797861030117,3.07560655828261,1.74986909166855,10.7789544651529,23.0004102983955,0,0,0,0,0,0,77.2848880483664,96.27635822751,74.158274210223,2.37191172448392,1.77858959222228,0,0,0,10.4860038681442,12.6792040756113,9.12468588314603,13.095576018174,10.5162480675691,7.9982275633065,12.1477697523387,64.1851787886359,71.0214940245131,66.1837526359215,19.82085857989,11.6195477657521,15.2070467923681,48.0066087337906,44.1885318599639,37.5057626800867,13.959149950069,12.9435400307286,11.1542720877071,10.3120004915784,11.9592211871246,13.9799584368975,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,5.63373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.323533699894818,0,0,0,3.22058876712702,1.25668024088073,0,0,0,0,14.5296920222678,40.7175536508578,33.9266750704734,8.34356736922927,5.37002460393694,14.1295870300501,16.061885043708,0.101839363850316,0,0,0.210441855886474,0.910843100738926,0,0.720248519221397,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0,4.20579897128254,3.2929475961371,0,0.264450566663544,0,0.464473343720877,0.257734922644187,0.403367049246685,1.11189021922435,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,7.70642831941401,5.50894926983355,0,0,1.26203287766503,2.34263246577983,3.87762115919038,1.43381278771531,2.67358408898873,0.849229592366497,2.02405350837447,2.63030272120181,0.790575555893047,21.5285282002611,0,0,0.162886959353576,0.164970122972535,0,11.4106898992841,5.44182402536552,3.20628635585027,5.31543407185391,2.15204603560749,1.55056975900933,1.45413491791002,1.06949213515416,0.632073515871632,0,0,1.36175842301515,19.2665370613502,39.1956811861746,21.8623775732224,15.2512600932355,5.70780216326626,3.29098041204242,2.13125464380219,0,0,0,0.16488625294148,0.645857706783622,0.301564624640779,0,0.328281799490123,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,1.82987520414164,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.95326289831947,5.9842280745933,9.73922372846974,5.32744865265431,5.48066015816514,3.7769694869485,3.37511250115903,7.20513925158753,6.79713613476307,11.39072685854,22.5218544257663,23.5424675306608,10.4147499510022,6.56388136084394,9.22297915563122,4.22840069435032,4.4449345560323,3.91466608753899,3.53011130550997,3.03236654116557,4.05566879824384,5.65879024158229,3.27745276144588,4.28968521112624,3.27382173046996,3.81034953026459,3.70829843023538,3.6652751888104,1.64834360321323,4.71036544430071,3.77156177623957,4.2594193478241,4.29185141905178,5.37781741539616,3.85848459702856,3.04612588410035,3.65855945745545,3.15683653725411,4.34573164306758,2.80571135828869,3.32178050747688,2.85662998889134,2.45538625901814,2.16911577660352,4.82266527452853,12.9901500527732,3.04111090979031,6.01638951335235,0.765153328275374,0,0|short_description=p1@Pou3f4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18994 | |||
|HGNC= | |||
|MCL_coexpression_id=1857 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A6H6L6,uniprot:P62515 | |||
|association_with_transcript=-15bp_to_NM_008901,uc009ucv.1_5end | |||
|cluster_id=chrX:108009761..108009788,+ | |||
|description=CAGE_peak_1_at_Pou3f4_5end | |||
|id=chrX:108009761..108009788,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.58e-21!44;CL:0000133!2.58e-21!44;CL:0002319!7.51e-21!43;CL:0000540!9.36e-18!33;CL:0000047!9.36e-18!33;CL:0000031!9.36e-18!33;CL:0000404!9.36e-18!33;CL:0000117!2.26e-16!23;CL:0000337!2.26e-16!23;CL:0000055!4.40e-15!50;CL:0000393!1.49e-12!39;CL:0000211!1.49e-12!39;CL:0002321!6.81e-07!70;CL:0000220!6.81e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.12e-22,44;CL:0000133,1.12e-22,44;CL:0002319,4.10e-22,43;CL:0000117,7.82e-20,23;CL:0000337,7.82e-20,23;CL:0000540,1.60e-19,33;CL:0000047,1.60e-19,33;CL:0000031,1.60e-19,33;CL:0000404,1.60e-19,33;CL:0000393,1.20e-14,39;CL:0000211,1.20e-14,39;CL:0002321,6.09e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.57e-38!73;UBERON:0005743!1.57e-38!73;UBERON:0000073!4.14e-38!75;UBERON:0001016!4.14e-38!75;UBERON:0004121!1.56e-29!102;UBERON:0000924!1.56e-29!102;UBERON:0006601!1.56e-29!102;UBERON:0001049!2.24e-27!52;UBERON:0005068!2.24e-27!52;UBERON:0006241!2.24e-27!52;UBERON:0007135!2.24e-27!52;UBERON:0000955!1.52e-26!50;UBERON:0006238!1.52e-26!50;UBERON:0002616!9.00e-26!49;UBERON:0000033!4.71e-25!63;UBERON:0002346!3.00e-22!71;UBERON:0003075!3.00e-22!71;UBERON:0007284!3.00e-22!71;UBERON:0003080!1.35e-21!40;UBERON:0002780!6.58e-21!39;UBERON:0001890!6.58e-21!39;UBERON:0006240!6.58e-21!39;UBERON:0003056!1.26e-19!49;UBERON:0002020!9.53e-19!34;UBERON:0002791!8.02e-16!29;UBERON:0003528!8.02e-16!29;UBERON:0001893!8.02e-16!29;UBERON:0007811!1.07e-12!86;UBERON:0000153!3.33e-12!94;UBERON:0000956!2.30e-10!21;UBERON:0001869!2.30e-10!21;UBERON:0000203!2.30e-10!21;UBERON:0002619!2.83e-08!17;UBERON:0002420!7.10e-07!8;UBERON:0007245!7.10e-07!8;UBERON:0010009!7.10e-07!8;UBERON:0010011!7.10e-07!8;UBERON:0000454!7.10e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.11e-45,73;UBERON:0001016,4.33e-43,75;UBERON:0000073,1.96e-35,54;UBERON:0001049,1.97e-33,52;UBERON:0005068,1.97e-33,52;UBERON:0006241,1.97e-33,52;UBERON:0007135,1.97e-33,52;UBERON:0000955,9.01e-30,47;UBERON:0006238,9.01e-30,47;UBERON:0004121,1.30e-29,95;UBERON:0000924,1.30e-29,95;UBERON:0006601,1.30e-29,95;UBERON:0002616,7.77e-29,46;UBERON:0002346,2.06e-26,64;UBERON:0003075,2.06e-26,64;UBERON:0007284,2.06e-26,64;UBERON:0003080,2.76e-26,40;UBERON:0002780,1.95e-25,39;UBERON:0001890,1.95e-25,39;UBERON:0006240,1.95e-25,39;UBERON:0010371,2.67e-23,73;UBERON:0002020,9.13e-23,34;UBERON:0003528,3.74e-19,29;UBERON:0002791,3.74e-19,29;UBERON:0001893,3.74e-19,29;UBERON:0003056,1.41e-18,49;UBERON:0010314,2.40e-14,92;UBERON:0000956,2.03e-12,21;UBERON:0001869,2.03e-12,21;UBERON:0000203,2.03e-12,21;UBERON:0002619,7.63e-10,17;UBERON:0002420,4.02e-08,8;UBERON:0007245,4.02e-08,8;UBERON:0010009,4.02e-08,8;UBERON:0010011,4.02e-08,8;UBERON:0000454,4.02e-08,8;UBERON:0003076,1.88e-07,12;UBERON:0003057,1.88e-07,12;UBERON:0001894,4.00e-07,10;UBERON:0006222,4.00e-07,10 | |||
|phase1_expression=245.348033764544,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,5.71527606113668,7.99584223859941,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,15.4797861030117,3.07560655828261,1.74986909166855,10.7789544651529,23.0004102983955,0,0,0,0,0,0,77.2848880483664,96.27635822751,74.158274210223,2.37191172448392,1.77858959222228,0,0,0,10.4860038681442,12.6792040756113,9.12468588314603,13.095576018174,10.5162480675691,7.9982275633065,12.1477697523387,64.1851787886359,71.0214940245131,66.1837526359215,19.82085857989,11.6195477657521,15.2070467923681,48.0066087337906,44.1885318599639,37.5057626800867,13.959149950069,12.9435400307286,11.1542720877071,10.3120004915784,11.9592211871246,13.9799584368975,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,5.63373679106722,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.323533699894818,0,0,0,3.22058876712702,1.25668024088073,0,0,0,0,14.5296920222678,40.7175536508578,33.9266750704734,8.34356736922927,5.37002460393694,14.1295870300501,16.061885043708,0.101839363850316,0,0,0.210441855886474,0.910843100738926,0,0.720248519221397,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0,4.20579897128254,3.2929475961371,0,0.264450566663544,0,0.464473343720877,0.257734922644187,0.403367049246685,1.11189021922435,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0,0,7.70642831941401,5.50894926983355,0,0,1.26203287766503,2.34263246577983,3.87762115919038,1.43381278771531,2.67358408898873,0.849229592366497,2.02405350837447,2.63030272120181,0.790575555893047,21.5285282002611,0,0,0.162886959353576,0.164970122972535,0,11.4106898992841,5.44182402536552,3.20628635585027,5.31543407185391,2.15204603560749,1.55056975900933,1.45413491791002,1.06949213515416,0.632073515871632,0,0,1.36175842301515,19.2665370613502,39.1956811861746,21.8623775732224,15.2512600932355,5.70780216326626,3.29098041204242,2.13125464380219,0,0,0,0.16488625294148,0.645857706783622,0.301564624640779,0,0.328281799490123,0,7.78786268444141,0,0,0,0,0,0,0,0,0,0,0,1.82987520414164,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.95326289831947,5.9842280745933,9.73922372846974,5.32744865265431,5.48066015816514,3.7769694869485,3.37511250115903,7.20513925158753,6.79713613476307,11.39072685854,22.5218544257663,23.5424675306608,10.4147499510022,6.56388136084394,9.22297915563122,4.22840069435032,4.4449345560323,3.91466608753899,3.53011130550997,3.03236654116557,4.05566879824384,5.65879024158229,3.27745276144588,4.28968521112624,3.27382173046996,3.81034953026459,3.70829843023538,3.6652751888104,1.64834360321323,4.71036544430071,3.77156177623957,4.2594193478241,4.29185141905178,5.37781741539616,3.85848459702856,3.04612588410035,3.65855945745545,3.15683653725411,4.34573164306758,2.80571135828869,3.32178050747688,2.85662998889134,2.45538625901814,2.16911577660352,4.82266527452853,12.9901500527732,3.04111090979031,6.01638951335235,0.765153328275374,0,0 | |||
|short_description=p1@Pou3f4 | |||
}} |
Revision as of 22:48, 5 August 2015
Short description: | p1@Pou3f4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pou3f4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1857 |
Association with transcript: | -15bp_to_NM_008901, uc009ucv.1_5end |
EntrezGene: | 18994 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.12e-22 | 44 |
neurectodermal cell | 1.12e-22 | 44 |
neural cell | 4.10e-22 | 43 |
CNS neuron (sensu Vertebrata) | 7.82e-20 | 23 |
neuroblast (sensu Vertebrata) | 7.82e-20 | 23 |
neuron | 1.60e-19 | 33 |
neuronal stem cell | 1.60e-19 | 33 |
neuroblast | 1.60e-19 | 33 |
electrically signaling cell | 1.60e-19 | 33 |
electrically responsive cell | 1.20e-14 | 39 |
electrically active cell | 1.20e-14 | 39 |
embryonic cell | 6.09e-09 | 70 |