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FFCP PHASE1:Mm9::chr13:49415568..49415587,-: Difference between revisions

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|id=chr13:49415568..49415587,-
|id=chr13:49415568..49415587,-
|ontology_enrichment_celltype=CL:0002319!1.19e-15!43;CL:0000221!1.67e-15!44;CL:0000133!1.67e-15!44;CL:0000055!2.27e-14!50;CL:0000117!1.47e-11!23;CL:0000337!1.47e-11!23;CL:0000540!6.30e-11!33;CL:0000047!6.30e-11!33;CL:0000031!6.30e-11!33;CL:0000404!6.30e-11!33;CL:0000393!2.03e-10!39;CL:0000211!2.03e-10!39;CL:0002321!2.61e-10!70;CL:0000220!2.61e-10!70
|ontology_enrichment_celltype=CL:0002319!1.19e-15!43;CL:0000221!1.67e-15!44;CL:0000133!1.67e-15!44;CL:0000055!2.27e-14!50;CL:0000117!1.47e-11!23;CL:0000337!1.47e-11!23;CL:0000540!6.30e-11!33;CL:0000047!6.30e-11!33;CL:0000031!6.30e-11!33;CL:0000404!6.30e-11!33;CL:0000393!2.03e-10!39;CL:0000211!2.03e-10!39;CL:0002321!2.61e-10!70;CL:0000220!2.61e-10!70
|ontology_enrichment_celltype_v019_2=CL:0002319,4.00e-20,43;CL:0000221,1.92e-19,44;CL:0000133,1.92e-19,44;CL:0000117,1.06e-14,23;CL:0000337,1.06e-14,23;CL:0002321,1.64e-13,70;CL:0000540,2.20e-12,33;CL:0000047,2.20e-12,33;CL:0000031,2.20e-12,33;CL:0000404,2.20e-12,33;CL:0000393,2.09e-10,39;CL:0000211,2.09e-10,39;CL:0000333,2.26e-09,10;CL:0000095,2.26e-09,10;CL:0000243,2.26e-09,10;CL:0000123,2.26e-09,10;CL:0000125,2.26e-09,10;CL:0000030,2.26e-09,10;CL:0000339,2.26e-09,10;CL:0002453,4.15e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.15e-31!75;UBERON:0001016!1.15e-31!75;UBERON:0001017!5.22e-30!73;UBERON:0005743!5.22e-30!73;UBERON:0004121!2.38e-28!102;UBERON:0000924!2.38e-28!102;UBERON:0006601!2.38e-28!102;UBERON:0000033!1.44e-25!63;UBERON:0001049!3.71e-25!52;UBERON:0005068!3.71e-25!52;UBERON:0006241!3.71e-25!52;UBERON:0007135!3.71e-25!52;UBERON:0000955!1.67e-24!50;UBERON:0006238!1.67e-24!50;UBERON:0002346!2.36e-24!71;UBERON:0003075!2.36e-24!71;UBERON:0007284!2.36e-24!71;UBERON:0002616!8.61e-24!49;UBERON:0003056!6.73e-21!49;UBERON:0003080!9.31e-19!40;UBERON:0002020!1.38e-18!34;UBERON:0002780!3.75e-18!39;UBERON:0001890!3.75e-18!39;UBERON:0006240!3.75e-18!39;UBERON:0002791!3.45e-16!29;UBERON:0003528!3.45e-16!29;UBERON:0001893!3.45e-16!29;UBERON:0007811!1.67e-15!86;UBERON:0000153!2.19e-13!94;UBERON:0000956!1.64e-11!21;UBERON:0001869!1.64e-11!21;UBERON:0000203!1.64e-11!21;UBERON:0002619!6.05e-10!17;UBERON:0003076!5.78e-07!12;UBERON:0003057!5.78e-07!12
|ontology_enrichment_uberon=UBERON:0000073!1.15e-31!75;UBERON:0001016!1.15e-31!75;UBERON:0001017!5.22e-30!73;UBERON:0005743!5.22e-30!73;UBERON:0004121!2.38e-28!102;UBERON:0000924!2.38e-28!102;UBERON:0006601!2.38e-28!102;UBERON:0000033!1.44e-25!63;UBERON:0001049!3.71e-25!52;UBERON:0005068!3.71e-25!52;UBERON:0006241!3.71e-25!52;UBERON:0007135!3.71e-25!52;UBERON:0000955!1.67e-24!50;UBERON:0006238!1.67e-24!50;UBERON:0002346!2.36e-24!71;UBERON:0003075!2.36e-24!71;UBERON:0007284!2.36e-24!71;UBERON:0002616!8.61e-24!49;UBERON:0003056!6.73e-21!49;UBERON:0003080!9.31e-19!40;UBERON:0002020!1.38e-18!34;UBERON:0002780!3.75e-18!39;UBERON:0001890!3.75e-18!39;UBERON:0006240!3.75e-18!39;UBERON:0002791!3.45e-16!29;UBERON:0003528!3.45e-16!29;UBERON:0001893!3.45e-16!29;UBERON:0007811!1.67e-15!86;UBERON:0000153!2.19e-13!94;UBERON:0000956!1.64e-11!21;UBERON:0001869!1.64e-11!21;UBERON:0000203!1.64e-11!21;UBERON:0002619!6.05e-10!17;UBERON:0003076!5.78e-07!12;UBERON:0003057!5.78e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.49e-38,75;UBERON:0001017,1.09e-35,73;UBERON:0004121,2.20e-33,95;UBERON:0000924,2.20e-33,95;UBERON:0006601,2.20e-33,95;UBERON:0000073,2.86e-32,54;UBERON:0001049,2.92e-30,52;UBERON:0005068,2.92e-30,52;UBERON:0006241,2.92e-30,52;UBERON:0007135,2.92e-30,52;UBERON:0002346,1.20e-27,64;UBERON:0003075,1.20e-27,64;UBERON:0007284,1.20e-27,64;UBERON:0000955,2.90e-27,47;UBERON:0006238,2.90e-27,47;UBERON:0002616,3.48e-26,46;UBERON:0002020,9.92e-23,34;UBERON:0010371,1.54e-22,73;UBERON:0003080,4.24e-21,40;UBERON:0003056,1.29e-20,49;UBERON:0003528,3.09e-20,29;UBERON:0002791,3.09e-20,29;UBERON:0001893,3.09e-20,29;UBERON:0002780,3.58e-20,39;UBERON:0001890,3.58e-20,39;UBERON:0006240,3.58e-20,39;UBERON:0010314,3.40e-16,92;UBERON:0000956,8.55e-13,21;UBERON:0001869,8.55e-13,21;UBERON:0000203,8.55e-13,21;UBERON:0002619,1.84e-11,17;UBERON:0003076,1.37e-09,12;UBERON:0003057,1.37e-09,12;UBERON:0002420,6.75e-09,8;UBERON:0007245,6.75e-09,8;UBERON:0010009,6.75e-09,8;UBERON:0010011,6.75e-09,8;UBERON:0000454,6.75e-09,8;UBERON:0001954,7.55e-09,7;UBERON:0003022,7.55e-09,7;UBERON:0002421,7.55e-09,7;UBERON:0000349,7.55e-09,7;UBERON:0002600,7.55e-09,7;UBERON:0011216,9.24e-09,194;UBERON:0000025,7.91e-08,114;UBERON:0004111,3.14e-07,122
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.10128051297009,0,2.39827672018491,5.93152693383074,6.61061656852564,1.67983705950435,1.43752564364972,0,0,0,0.514518872071894,0,0,1.41621522601718,0.528990979272033,0,0,0.889294796111139,1.3498495759221,1.97773272513395,2.1314403448383,3.59520132622086,3.45796474789399,1.55534418462716,1.62007125998029,0.841299845405528,4.57041575046086,3.3130281142742,5.51208596467293,6.22995561618536,1.83843757322004,2.20231761998777,4.21368215681119,4.91540906419979,2.63772575460388,2.8361169516747,3.12548022334056,5.862842979029,1.68828783009504,5.34793867218835,0.883885756421003,1.28134512719193,1.1183966749518,2.95332153999418,18.5150322261625,0,0,0,0,0,0,0.702222100658759,3.57903677413921,0.779358013808606,3.18005617059306,0.14084341977668,12.8326477414318,2.54805239706646,7.11066703153331,0.865964164044856,1.52015919285059,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0.23517741427141,0,0,0,0,0.323533699894818,0.883366073841574,1.93950101254089,0,7.61230072230023,6.91174132484402,0,0,0.599902730993408,0.254140454146129,2.69623150928681,2.28750301409313,1.38219787324151,2.25971616249959,2.81287003063364,4.36354893575076,4.38051410282946,0,0.870848794270651,0,0,0.910843100738926,0.689706313300419,2.88099407688559,1.20563854268572,1.7009124787832,1.40925092313335,0.843315521037559,0.776110112217047,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.85228302282712,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,8.18808008937739,12.3072270921813,0.327869890753351,0.252470927204373,0.315508219416257,0,0.430846795465598,1.43381278771531,3.56477878531831,4.24614796183249,0.404810701674894,0,0.395287777946524,3.21321316421807,2.41298144854057,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,2.06973894052407,1.07168517515796,0.354680467284547,0.713475270408282,0.822745103010605,0.304464949114599,0.23467170806371,0,0,0.8244312647074,0,0,0.119372344003136,0,0,10.9400928186201,0,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0.483168241652012,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,2.94749498699775,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,3.3885110557024,0.920650473014354,2.29158205375759,1.71853182343688,0.685082519770642,3.0215755895588,2.70009000092722,1.35096360967266,2.26571204492102,0.51776031175182,0.31136204275253,1.59609949360412,1.36586884603307,0.486213434136588,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0,0.758091635291392,0.25347929989024,0.565879024158229,0.468207537349412,0.832326981263301,0.516919220600519,0.476293691283074,0.463537303779422,0.38581844092741,1.23625770240992,0,0,0.887379030796687,0,1.88950341622027,0.658765662907314,0.846146078916765,0.914639864363863,0,0.271608227691724,1.12228454331548,0.474540072496697,0.886540341380071,0.409231043169689,0.154936841185966,0.192906610981141,1.49886346762768,0.467863216890817,0.429742108096597,0.57386499620653,0.661774257358546,1.15933917810211
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.10128051297009,0,2.39827672018491,5.93152693383074,6.61061656852564,1.67983705950435,1.43752564364972,0,0,0,0.514518872071894,0,0,1.41621522601718,0.528990979272033,0,0,0.889294796111139,1.3498495759221,1.97773272513395,2.1314403448383,3.59520132622086,3.45796474789399,1.55534418462716,1.62007125998029,0.841299845405528,4.57041575046086,3.3130281142742,5.51208596467293,6.22995561618536,1.83843757322004,2.20231761998777,4.21368215681119,4.91540906419979,2.63772575460388,2.8361169516747,3.12548022334056,5.862842979029,1.68828783009504,5.34793867218835,0.883885756421003,1.28134512719193,1.1183966749518,2.95332153999418,18.5150322261625,0,0,0,0,0,0,0.702222100658759,3.57903677413921,0.779358013808606,3.18005617059306,0.14084341977668,12.8326477414318,2.54805239706646,7.11066703153331,0.865964164044856,1.52015919285059,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0.23517741427141,0,0,0,0,0.323533699894818,0.883366073841574,1.93950101254089,0,7.61230072230023,6.91174132484402,0,0,0.599902730993408,0.254140454146129,2.69623150928681,2.28750301409313,1.38219787324151,2.25971616249959,2.81287003063364,4.36354893575076,4.38051410282946,0,0.870848794270651,0,0,0.910843100738926,0.689706313300419,2.88099407688559,1.20563854268572,1.7009124787832,1.40925092313335,0.843315521037559,0.776110112217047,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,1.85228302282712,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,8.18808008937739,12.3072270921813,0.327869890753351,0.252470927204373,0.315508219416257,0,0.430846795465598,1.43381278771531,3.56477878531831,4.24614796183249,0.404810701674894,0,0.395287777946524,3.21321316421807,2.41298144854057,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,2.06973894052407,1.07168517515796,0.354680467284547,0.713475270408282,0.822745103010605,0.304464949114599,0.23467170806371,0,0,0.8244312647074,0,0,0.119372344003136,0,0,10.9400928186201,0,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,0.483168241652012,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,2.94749498699775,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,3.3885110557024,0.920650473014354,2.29158205375759,1.71853182343688,0.685082519770642,3.0215755895588,2.70009000092722,1.35096360967266,2.26571204492102,0.51776031175182,0.31136204275253,1.59609949360412,1.36586884603307,0.486213434136588,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0,0.758091635291392,0.25347929989024,0.565879024158229,0.468207537349412,0.832326981263301,0.516919220600519,0.476293691283074,0.463537303779422,0.38581844092741,1.23625770240992,0,0,0.887379030796687,0,1.88950341622027,0.658765662907314,0.846146078916765,0.914639864363863,0,0.271608227691724,1.12228454331548,0.474540072496697,0.886540341380071,0.409231043169689,0.154936841185966,0.192906610981141,1.49886346762768,0.467863216890817,0.429742108096597,0.57386499620653,0.661774257358546,1.15933917810211
|short_description=p3@Fgd3
|short_description=p3@Fgd3
}}
}}

Revision as of 21:22, 13 November 2012

Short description:p3@Fgd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Fgd3_5end
Coexpression cluster:NA
Association with transcript: 92bp_to_ENSMUST00000110086, uc007qje.1_5end
EntrezGene:Fgd3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Fgd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F918.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.19
medulla oblongata, neonate N30.CNhs11200.1396-42A312.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system3.49e-3875
central nervous system1.09e-3573
ectoderm-derived structure2.20e-3395
ectoderm2.20e-3395
presumptive ectoderm2.20e-3395
regional part of nervous system2.86e-3254
neural tube2.92e-3052
neural rod2.92e-3052
future spinal cord2.92e-3052
neural keel2.92e-3052
neurectoderm1.20e-2764
neural plate1.20e-2764
presumptive neural plate1.20e-2764
brain2.90e-2747
future brain2.90e-2747
regional part of brain3.48e-2646
gray matter9.92e-2334
ecto-epithelium1.54e-2273
anterior neural tube4.24e-2140
pre-chordal neural plate1.29e-2049
brain grey matter3.09e-2029
regional part of telencephalon3.09e-2029
telencephalon3.09e-2029
regional part of forebrain3.58e-2039
forebrain3.58e-2039
future forebrain3.58e-2039
structure with developmental contribution from neural crest3.40e-1692
cerebral cortex8.55e-1321
cerebral hemisphere8.55e-1321
pallium8.55e-1321
regional part of cerebral cortex1.84e-1117
posterior neural tube1.37e-0912
chordal neural plate1.37e-0912
basal ganglion6.75e-098
nuclear complex of neuraxis6.75e-098
aggregate regional part of brain6.75e-098
collection of basal ganglia6.75e-098
cerebral subcortex6.75e-098
Ammon's horn7.55e-097
lobe parts of cerebral cortex7.55e-097
hippocampal formation7.55e-097
limbic system7.55e-097
limbic lobe7.55e-097
organ system subdivision9.24e-09194
tube7.91e-08114
anatomical conduit3.14e-07122







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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