FFCP PHASE1:Mm9::chr4:130348654..130348684,+: Difference between revisions
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|id=chr4:130348654..130348684,+ | |id=chr4:130348654..130348684,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.81e-14!50;CL:0000117!8.03e-14!23;CL:0000337!8.03e-14!23;CL:0002319!3.65e-13!43;CL:0000221!5.37e-13!44;CL:0000133!5.37e-13!44;CL:0000393!1.72e-11!39;CL:0000211!1.72e-11!39;CL:0000540!6.76e-11!33;CL:0000047!6.76e-11!33;CL:0000031!6.76e-11!33;CL:0000404!6.76e-11!33 | |ontology_enrichment_celltype=CL:0000055!6.81e-14!50;CL:0000117!8.03e-14!23;CL:0000337!8.03e-14!23;CL:0002319!3.65e-13!43;CL:0000221!5.37e-13!44;CL:0000133!5.37e-13!44;CL:0000393!1.72e-11!39;CL:0000211!1.72e-11!39;CL:0000540!6.76e-11!33;CL:0000047!6.76e-11!33;CL:0000031!6.76e-11!33;CL:0000404!6.76e-11!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-19,23;CL:0000337,1.51e-19,23;CL:0002319,1.62e-16,43;CL:0000221,7.43e-16,44;CL:0000133,7.43e-16,44;CL:0000540,3.82e-14,33;CL:0000047,3.82e-14,33;CL:0000031,3.82e-14,33;CL:0000404,3.82e-14,33;CL:0000393,3.90e-14,39;CL:0000211,3.90e-14,39;CL:0002321,8.13e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.82e-23!75;UBERON:0001016!9.82e-23!75;UBERON:0001017!5.30e-22!73;UBERON:0005743!5.30e-22!73;UBERON:0004121!5.24e-21!102;UBERON:0000924!5.24e-21!102;UBERON:0006601!5.24e-21!102;UBERON:0002346!1.37e-18!71;UBERON:0003075!1.37e-18!71;UBERON:0007284!1.37e-18!71;UBERON:0001049!1.50e-17!52;UBERON:0005068!1.50e-17!52;UBERON:0006241!1.50e-17!52;UBERON:0007135!1.50e-17!52;UBERON:0000955!4.87e-16!50;UBERON:0006238!4.87e-16!50;UBERON:0002020!1.25e-15!34;UBERON:0002616!1.35e-15!49;UBERON:0000033!1.27e-13!63;UBERON:0002791!2.36e-12!29;UBERON:0003528!2.36e-12!29;UBERON:0001893!2.36e-12!29;UBERON:0003080!5.81e-12!40;UBERON:0002780!1.46e-11!39;UBERON:0001890!1.46e-11!39;UBERON:0006240!1.46e-11!39;UBERON:0003056!6.82e-11!49;UBERON:0000025!1.05e-08!114;UBERON:0000956!3.79e-08!21;UBERON:0001869!3.79e-08!21;UBERON:0000203!3.79e-08!21;UBERON:0000468!1.13e-07!333;UBERON:0004111!4.62e-07!122;UBERON:0000479!7.83e-07!349 | |ontology_enrichment_uberon=UBERON:0000073!9.82e-23!75;UBERON:0001016!9.82e-23!75;UBERON:0001017!5.30e-22!73;UBERON:0005743!5.30e-22!73;UBERON:0004121!5.24e-21!102;UBERON:0000924!5.24e-21!102;UBERON:0006601!5.24e-21!102;UBERON:0002346!1.37e-18!71;UBERON:0003075!1.37e-18!71;UBERON:0007284!1.37e-18!71;UBERON:0001049!1.50e-17!52;UBERON:0005068!1.50e-17!52;UBERON:0006241!1.50e-17!52;UBERON:0007135!1.50e-17!52;UBERON:0000955!4.87e-16!50;UBERON:0006238!4.87e-16!50;UBERON:0002020!1.25e-15!34;UBERON:0002616!1.35e-15!49;UBERON:0000033!1.27e-13!63;UBERON:0002791!2.36e-12!29;UBERON:0003528!2.36e-12!29;UBERON:0001893!2.36e-12!29;UBERON:0003080!5.81e-12!40;UBERON:0002780!1.46e-11!39;UBERON:0001890!1.46e-11!39;UBERON:0006240!1.46e-11!39;UBERON:0003056!6.82e-11!49;UBERON:0000025!1.05e-08!114;UBERON:0000956!3.79e-08!21;UBERON:0001869!3.79e-08!21;UBERON:0000203!3.79e-08!21;UBERON:0000468!1.13e-07!333;UBERON:0004111!4.62e-07!122;UBERON:0000479!7.83e-07!349 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.20e-25,75;UBERON:0001017,2.26e-24,73;UBERON:0002020,4.53e-22,34;UBERON:0000073,1.51e-21,54;UBERON:0001049,9.77e-20,52;UBERON:0005068,9.77e-20,52;UBERON:0006241,9.77e-20,52;UBERON:0007135,9.77e-20,52;UBERON:0004121,1.05e-18,95;UBERON:0000924,1.05e-18,95;UBERON:0006601,1.05e-18,95;UBERON:0003528,2.89e-17,29;UBERON:0002791,2.89e-17,29;UBERON:0001893,2.89e-17,29;UBERON:0002346,1.56e-15,64;UBERON:0003075,1.56e-15,64;UBERON:0007284,1.56e-15,64;UBERON:0000955,1.80e-15,47;UBERON:0006238,1.80e-15,47;UBERON:0002616,6.94e-15,46;UBERON:0010314,1.22e-14,92;UBERON:0003080,7.90e-13,40;UBERON:0002780,2.79e-12,39;UBERON:0001890,2.79e-12,39;UBERON:0006240,2.79e-12,39;UBERON:0010371,8.72e-12,73;UBERON:0000956,4.12e-11,21;UBERON:0001869,4.12e-11,21;UBERON:0000203,4.12e-11,21;UBERON:0003056,1.20e-10,49;UBERON:0002619,6.05e-09,17;UBERON:0003076,4.96e-08,12;UBERON:0003057,4.96e-08,12;UBERON:0002021,5.60e-08,10;UBERON:0000411,5.60e-08,10;UBERON:0001950,5.60e-08,10;UBERON:0002420,1.35e-07,8;UBERON:0007245,1.35e-07,8;UBERON:0010009,1.35e-07,8;UBERON:0010011,1.35e-07,8;UBERON:0000454,1.35e-07,8 | |||
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| ||
|short_description=p3@Sdc3 | |short_description=p3@Sdc3 | ||
}} | }} |
Revision as of 20:06, 13 November 2012
Short description: | p3@Sdc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sdc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1801 |
Association with transcript: | 35bp_to_ENSMUST00000146093_5end |
EntrezGene: | Sdc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.51e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.51e-19 | 23 |
neural cell | 1.62e-16 | 43 |
ectodermal cell | 7.43e-16 | 44 |
neurectodermal cell | 7.43e-16 | 44 |
neuron | 3.82e-14 | 33 |
neuronal stem cell | 3.82e-14 | 33 |
neuroblast | 3.82e-14 | 33 |
electrically signaling cell | 3.82e-14 | 33 |
electrically responsive cell | 3.90e-14 | 39 |
electrically active cell | 3.90e-14 | 39 |
embryonic cell | 8.13e-10 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.