FFCP PHASE1:Mm9::chrX:10173130..10173156,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chrX:10173130..10173156,+ | |id=chrX:10173130..10173156,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.01e-07!23;CL:0000337!2.01e-07!23 | |ontology_enrichment_celltype=CL:0000117!2.01e-07!23;CL:0000337!2.01e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.08e-10,23;CL:0000337,5.08e-10,23;CL:0002614,2.39e-07,3;CL:0002319,4.60e-07,43;CL:0000221,7.88e-07,44;CL:0000133,7.88e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.40e-20!73;UBERON:0005743!3.40e-20!73;UBERON:0000073!2.71e-19!75;UBERON:0001016!2.71e-19!75;UBERON:0000033!2.85e-19!63;UBERON:0004121!5.66e-19!102;UBERON:0000924!5.66e-19!102;UBERON:0006601!5.66e-19!102;UBERON:0001049!1.83e-18!52;UBERON:0005068!1.83e-18!52;UBERON:0006241!1.83e-18!52;UBERON:0007135!1.83e-18!52;UBERON:0000955!3.67e-18!50;UBERON:0006238!3.67e-18!50;UBERON:0002616!1.87e-17!49;UBERON:0002346!2.16e-17!71;UBERON:0003075!2.16e-17!71;UBERON:0007284!2.16e-17!71;UBERON:0003056!1.59e-14!49;UBERON:0002020!4.69e-14!34;UBERON:0003080!6.58e-14!40;UBERON:0002780!2.22e-13!39;UBERON:0001890!2.22e-13!39;UBERON:0006240!2.22e-13!39;UBERON:0002791!5.06e-12!29;UBERON:0003528!5.06e-12!29;UBERON:0001893!5.06e-12!29;UBERON:0000025!1.29e-10!114;UBERON:0004111!1.44e-10!122;UBERON:0000956!4.88e-09!21;UBERON:0001869!4.88e-09!21;UBERON:0000203!4.88e-09!21;UBERON:0007811!2.51e-08!86;UBERON:0002619!3.74e-08!17;UBERON:0002021!5.03e-08!10;UBERON:0000411!5.03e-08!10;UBERON:0001950!5.03e-08!10;UBERON:0000153!1.64e-07!94;UBERON:0000468!2.18e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!3.40e-20!73;UBERON:0005743!3.40e-20!73;UBERON:0000073!2.71e-19!75;UBERON:0001016!2.71e-19!75;UBERON:0000033!2.85e-19!63;UBERON:0004121!5.66e-19!102;UBERON:0000924!5.66e-19!102;UBERON:0006601!5.66e-19!102;UBERON:0001049!1.83e-18!52;UBERON:0005068!1.83e-18!52;UBERON:0006241!1.83e-18!52;UBERON:0007135!1.83e-18!52;UBERON:0000955!3.67e-18!50;UBERON:0006238!3.67e-18!50;UBERON:0002616!1.87e-17!49;UBERON:0002346!2.16e-17!71;UBERON:0003075!2.16e-17!71;UBERON:0007284!2.16e-17!71;UBERON:0003056!1.59e-14!49;UBERON:0002020!4.69e-14!34;UBERON:0003080!6.58e-14!40;UBERON:0002780!2.22e-13!39;UBERON:0001890!2.22e-13!39;UBERON:0006240!2.22e-13!39;UBERON:0002791!5.06e-12!29;UBERON:0003528!5.06e-12!29;UBERON:0001893!5.06e-12!29;UBERON:0000025!1.29e-10!114;UBERON:0004111!1.44e-10!122;UBERON:0000956!4.88e-09!21;UBERON:0001869!4.88e-09!21;UBERON:0000203!4.88e-09!21;UBERON:0007811!2.51e-08!86;UBERON:0002619!3.74e-08!17;UBERON:0002021!5.03e-08!10;UBERON:0000411!5.03e-08!10;UBERON:0001950!5.03e-08!10;UBERON:0000153!1.64e-07!94;UBERON:0000468!2.18e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.95e-31,73;UBERON:0000073,1.27e-30,54;UBERON:0001016,2.27e-30,75;UBERON:0001049,1.01e-27,52;UBERON:0005068,1.01e-27,52;UBERON:0006241,1.01e-27,52;UBERON:0007135,1.01e-27,52;UBERON:0000955,1.30e-24,47;UBERON:0006238,1.30e-24,47;UBERON:0004121,1.38e-23,95;UBERON:0000924,1.38e-23,95;UBERON:0006601,1.38e-23,95;UBERON:0002020,3.66e-23,34;UBERON:0002616,5.42e-23,46;UBERON:0002346,9.35e-23,64;UBERON:0003075,9.35e-23,64;UBERON:0007284,9.35e-23,64;UBERON:0003528,4.38e-20,29;UBERON:0002791,4.38e-20,29;UBERON:0001893,4.38e-20,29;UBERON:0010371,4.97e-19,73;UBERON:0003080,1.13e-18,40;UBERON:0002780,1.91e-17,39;UBERON:0001890,1.91e-17,39;UBERON:0006240,1.91e-17,39;UBERON:0002021,5.16e-17,10;UBERON:0000411,5.16e-17,10;UBERON:0001950,5.16e-17,10;UBERON:0003056,1.05e-15,49;UBERON:0000025,9.06e-15,114;UBERON:0002619,1.02e-13,17;UBERON:0010314,1.42e-13,92;UBERON:0004111,2.95e-13,122;UBERON:0000956,1.08e-12,21;UBERON:0001869,1.08e-12,21;UBERON:0000203,1.08e-12,21;UBERON:0011216,4.05e-11,194;UBERON:0003076,1.05e-09,12;UBERON:0003057,1.05e-09,12;UBERON:0002420,7.53e-09,8;UBERON:0007245,7.53e-09,8;UBERON:0010009,7.53e-09,8;UBERON:0010011,7.53e-09,8;UBERON:0000454,7.53e-09,8;UBERON:0002950,9.02e-09,4;UBERON:0001891,9.02e-09,4;UBERON:0009616,9.02e-09,4;UBERON:0010286,9.02e-09,4;UBERON:0000483,1.74e-07,174;UBERON:0002038,2.39e-07,3;UBERON:0009663,2.39e-07,3;UBERON:0009661,2.39e-07,3;UBERON:0000125,2.39e-07,3;UBERON:0002308,2.39e-07,3;UBERON:0000119,2.63e-07,176 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.878744730937887,1.55543919259427,0.419959264876088,2.87505128729943,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,1.53687322128622,0.414758449233911,0.270011876663381,0.420649922702764,1.99955689082663,0.662605622854841,0.122490799214954,0.479227355091182,0,1.10115880999389,1.78762273319263,2.15049146558741,0.527545150920775,1.18933936683133,0,2.79182999001381,3.37657566019008,2.75036845998258,2.65165726926301,2.42031857358475,0.186399445825301,0,0.151143120213571,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,0.505524445014783,0,0.517875767294343,0,0,0.304465478312141,0.230615497256059,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0.647067399789637,0,0,0,1.17112318804619,9.00620839297857,0.255457055208591,0,0,0,1.3481157546434,3.66000482254901,1.00523481690292,2.08589184230732,4.34716277461562,2.0778804455956,2.59586020908412,0.101839363850316,0.373220911830279,0,0.420883711772948,0.390361328888111,0,0.360124259610698,0.30140963567143,0.272145996605311,0.384341160854549,0.281105173679186,1.03481348295606,0,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.243206428637567,0.584799949701329,0.439100230582101,0.402619256281115,2.94405927989778,0.308713837137853,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.949058123089023,0,0.502670417600539,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0.610953983535943,0.193952487167626,0,0.126473074248515,0,0.470996183524124,0.246794327843601,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.549122826376163,7.18841032636773,0,0,0.252578877947112,0.179397413521912,0,2.03228509183265,0,0,0,0.469380496577004,0.167506257441816,0.238043640886014,0.975668239288994,0.472905432318573,0.8858587585951,0.637819074629948,1.63863314715738,1.38147985492716,1.59113964439663,0,0,0.491764273019036,0,1.60550589987792,1.52375192569864,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,3.53453448063988,0,0.178065603667255,0,0,0,0.728341908464944,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,0,0.713475270408282,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,1.8542530201051,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,3.95326289831947,0.920650473014354,1.71868654031819,5.15559547031063,5.48066015816514,6.0431511791176,4.72515750162264,2.2516060161211,1.81256963593682,3.10656187051092,0.103787347584177,0,0.170733605754134,0,0,0,0.666740183404846,0.618105171716683,0.962757628775446,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.376437521661322,0.25384382367503,0.73171189149109,0,0.679020569229309,0.561142271657738,0.593175090620871,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.878744730937887,1.55543919259427,0.419959264876088,2.87505128729943,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,1.53687322128622,0.414758449233911,0.270011876663381,0.420649922702764,1.99955689082663,0.662605622854841,0.122490799214954,0.479227355091182,0,1.10115880999389,1.78762273319263,2.15049146558741,0.527545150920775,1.18933936683133,0,2.79182999001381,3.37657566019008,2.75036845998258,2.65165726926301,2.42031857358475,0.186399445825301,0,0.151143120213571,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0,0.505524445014783,0,0.517875767294343,0,0,0.304465478312141,0.230615497256059,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0.647067399789637,0,0,0,1.17112318804619,9.00620839297857,0.255457055208591,0,0,0,1.3481157546434,3.66000482254901,1.00523481690292,2.08589184230732,4.34716277461562,2.0778804455956,2.59586020908412,0.101839363850316,0.373220911830279,0,0.420883711772948,0.390361328888111,0,0.360124259610698,0.30140963567143,0.272145996605311,0.384341160854549,0.281105173679186,1.03481348295606,0,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.243206428637567,0.584799949701329,0.439100230582101,0.402619256281115,2.94405927989778,0.308713837137853,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.949058123089023,0,0.502670417600539,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0.610953983535943,0.193952487167626,0,0.126473074248515,0,0.470996183524124,0.246794327843601,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.549122826376163,7.18841032636773,0,0,0.252578877947112,0.179397413521912,0,2.03228509183265,0,0,0,0.469380496577004,0.167506257441816,0.238043640886014,0.975668239288994,0.472905432318573,0.8858587585951,0.637819074629948,1.63863314715738,1.38147985492716,1.59113964439663,0,0,0.491764273019036,0,1.60550589987792,1.52375192569864,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,3.53453448063988,0,0.178065603667255,0,0,0,0.728341908464944,0.604647113929502,0.377210159511796,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,0,0.713475270408282,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,1.8542530201051,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,3.95326289831947,0.920650473014354,1.71868654031819,5.15559547031063,5.48066015816514,6.0431511791176,4.72515750162264,2.2516060161211,1.81256963593682,3.10656187051092,0.103787347584177,0,0.170733605754134,0,0,0,0.666740183404846,0.618105171716683,0.962757628775446,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.287177344778066,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.376437521661322,0.25384382367503,0.73171189149109,0,0.679020569229309,0.561142271657738,0.593175090620871,0.0985044823755635,0,0,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chrX:10173130..10173156,+ | |short_description=p@chrX:10173130..10173156,+ | ||
}} | }} |
Revision as of 23:35, 14 November 2012
Short description: | p@chrX:10173130..10173156, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:10173130..10173156, + |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.08e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.08e-10 | 23 |
neuron of the substantia nigra | 2.39e-07 | 3 |
neural cell | 4.60e-07 | 43 |
ectodermal cell | 7.88e-07 | 44 |
neurectodermal cell | 7.88e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.