FFCP PHASE1:Hg19::chr10:123358164..123358177,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2263|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3689|TSSclassifier=S|UniProt=P21802|association_with_transcript=-192bp_to_ENST00000351936,ENST00000356226,ENST00000369062,NM_000141,NM_001144917,NM_001144918,NM_001144919,NM_022970,uc001lfm.2,uc001lfn.3,uc001lfo.1,uc010qtj.1,uc010qtk.1,uc010qtl.1,uc010qtm.1_5end|coexpression_cluster_id=C4|description=CAGE_peak_4_at_FGFR2_5end|id=chr10:123358164..123358177,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.50e-20;82!UBERON:0006241;1.65e-15;3!UBERON:0003057;1.65e-15;3!UBERON:0006215;1.19e-14;3!UBERON:0002532;8.39e-08;206!UBERON:0010316;8.39e-08;206|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.21e-83!57;UBERON:0005068!8.21e-83!57;UBERON:0006241!8.21e-83!57;UBERON:0007135!8.21e-83!57;UBERON:0001017!8.81e-77!82;UBERON:0005743!1.33e-75!86;UBERON:0000073!4.01e-73!94;UBERON:0001016!4.01e-73!94;UBERON:0002616!8.82e-68!59;UBERON:0000955!8.44e-65!69;UBERON:0006238!8.44e-65!69;UBERON:0003075!9.38e-59!86;UBERON:0007284!9.38e-59!86;UBERON:0002780!1.61e-58!41;UBERON:0001890!1.61e-58!41;UBERON:0006240!1.61e-58!41;UBERON:0002020!4.25e-58!34;UBERON:0003528!4.25e-58!34;UBERON:0001893!5.30e-58!34;UBERON:0003080!6.13e-57!42;UBERON:0002346!1.35e-55!90;UBERON:0002791!1.81e-55!33;UBERON:0007023!1.39e-54!115;UBERON:0001869!9.81e-53!32;UBERON:0003056!4.69e-39!61;UBERON:0002619!1.34e-37!22;UBERON:0001950!3.35e-37!20;UBERON:0000956!4.07e-36!25;UBERON:0000203!4.07e-36!25;UBERON:0000033!6.19e-35!123;UBERON:0004121!6.19e-35!169;UBERON:0000924!8.16e-34!173;UBERON:0006601!8.16e-34!173;UBERON:0000153!9.32e-33!129;UBERON:0007811!9.32e-33!129;UBERON:0003076!5.52e-26!15;UBERON:0003057!5.52e-26!15;UBERON:0002308!2.69e-24!9;UBERON:0000125!2.69e-24!9;UBERON:0004732!4.68e-21!13;UBERON:0000025!3.45e-19!194;UBERON:0009663!6.42e-19!7;UBERON:0004733!1.70e-18!12;UBERON:0002028!1.70e-18!12;UBERON:0007277!1.70e-18!12;UBERON:0002420!1.76e-18!9;UBERON:0007245!1.76e-18!9;UBERON:0010009!1.76e-18!9;UBERON:0010011!1.76e-18!9;UBERON:0000454!1.76e-18!9;UBERON:0002298!8.43e-18!8;UBERON:0004111!1.31e-15!241;UBERON:0002021!1.15e-13!5;UBERON:0001872!1.80e-13!5;UBERON:0000483!7.46e-13!309;UBERON:0000119!1.33e-12!312;UBERON:0000064!1.90e-12!219;UBERON:0000477!5.85e-12!286;UBERON:0001871!1.64e-11!7;UBERON:0000200!1.75e-11!6;UBERON:0002680!3.14e-11!9;UBERON:0001895!3.14e-11!9;UBERON:0010092!3.14e-11!9;UBERON:0000369!4.81e-11!4;UBERON:0002435!4.81e-11!4;UBERON:0000204!4.81e-11!4;UBERON:0010082!4.81e-11!4;UBERON:0000988!8.75e-10!3;UBERON:0001896!8.75e-10!3;UBERON:0005290!8.75e-10!3;UBERON:0010096!8.75e-10!3;UBERON:0006331!9.00e-10!3;UBERON:0002240!1.26e-09!3;UBERON:0000475!1.40e-09!365;UBERON:0000062!3.03e-09!511;UBERON:0002771!8.57e-09!3;UBERON:0000922!8.99e-09!612;UBERON:0005383!1.42e-08!3;UBERON:0005382!1.42e-08!3;UBERON:0000923!5.93e-08!604;UBERON:0005291!5.93e-08!604;UBERON:0006598!5.93e-08!604;UBERON:0002532!5.93e-08!604;UBERON:0002050!6.51e-08!605;UBERON:0005423!6.51e-08!605;UBERON:0005162!3.67e-07!2;UBERON:0000122!3.67e-07!2;UBERON:0000467!4.03e-07!625;UBERON:0000480!4.40e-07!626;UBERON:0002148!4.48e-07!2;UBERON:0009662!4.48e-07!2;UBERON:0000468!6.32e-07!659;UBERON:0001875!6.68e-07!2;UBERON:0006514!6.68e-07!2|ontology_enrichment_uberon_v019=UBERON:0001893;3.03e-50;34!UBERON:0000073;8.07e-50;53!UBERON:0002616;8.07e-50;53!UBERON:0003528;5.50e-47;34!UBERON:0002020;5.50e-47;34!UBERON:0002791;4.39e-45;32!UBERON:0001869;6.04e-44;32!UBERON:0002780;1.08e-42;41!UBERON:0001890;1.08e-42;41!UBERON:0004732;5.41e-36;13!UBERON:0002619;9.57e-36;22!UBERON:0001950;5.60e-34;20!UBERON:0001017;1.29e-33;75!UBERON:0000955;3.83e-33;68!UBERON:0000125;4.79e-33;9!UBERON:0002308;4.79e-33;9!UBERON:0004733;1.57e-31;12!UBERON:0002028;1.57e-31;12!UBERON:0000956;2.86e-31;25!UBERON:0000203;2.86e-31;25!UBERON:0002298;1.11e-29;6!UBERON:0001016;3.29e-27;83!UBERON:0009663;6.13e-24;7!UBERON:0007023;2.13e-19;114!UBERON:0000200;5.58e-19;6!UBERON:0002680;7.12e-19;9!UBERON:0001895;7.12e-19;9!UBERON:0002420;1.70e-18;9!UBERON:0007245;1.70e-18;9!UBERON:0010009;1.70e-18;9!UBERON:0010011;1.70e-18;9!UBERON:0000454;1.70e-18;9!UBERON:0000988;9.89e-16;3!UBERON:0001896;9.89e-16;3!UBERON:0005290;9.89e-16;3!UBERON:0002240;1.65e-15;3!UBERON:0005174;1.65e-15;3!UBERON:0001137;1.65e-15;3!UBERON:0002021;6.30e-15;5!UBERON:0011216;2.57e-12;132!UBERON:0005162;3.21e-11;2!UBERON:0000122;3.21e-11;2!UBERON:0002148;4.54e-11;2!UBERON:0006331;4.54e-11;2!UBERON:0009662;4.54e-11;2!UBERON:0000369;6.91e-11;4!UBERON:0002435;6.91e-11;4!UBERON:0000204;6.91e-11;4!UBERON:0001875;7.96e-11;2!UBERON:0006514;7.96e-11;2!UBERON:0001897;2.34e-10;2!UBERON:0010225;2.34e-10;2!UBERON:0002771;4.62e-10;2!UBERON:0001872;6.82e-09;5!UBERON:0010314;2.29e-08;132!UBERON:0002037;1.48e-07;6!UBERON:0005383;5.55e-07;3!UBERON:0005382;5.55e-07;3!U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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2263 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3689 | |||
|TSSclassifier=S | |||
|UniProt=P21802 | |||
|association_with_transcript=-192bp_to_ENST00000351936,ENST00000356226,ENST00000369062,NM_000141,NM_001144917,NM_001144918,NM_001144919,NM_022970,uc001lfm.2,uc001lfn.3,uc001lfo.1,uc010qtj.1,uc010qtk.1,uc010qtl.1,uc010qtm.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_FGFR2_5end | |||
|id=chr10:123358164..123358177,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.50e-20;82!UBERON:0006241;1.65e-15;3!UBERON:0003057;1.65e-15;3!UBERON:0006215;1.19e-14;3!UBERON:0002532;8.39e-08;206!UBERON:0010316;8.39e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@FGFR2 | |||
}} |
Revision as of 12:05, 10 September 2013
Short description: | p4@FGFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FGFR2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -192bp_to_ENST00000351936, ENST00000356226, ENST00000369062, NM_000141, NM_001144917, NM_001144918, NM_001144919, NM_022970, uc001lfm.2, uc001lfn.3, uc001lfo.1, uc010qtj.1, uc010qtk.1, uc010qtl.1, uc010qtm.1_5end |
EntrezGene: | FGFR2 |
HGNC: | 3689 |
UniProt: | P21802 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.