FFCP PHASE1:Hg19::chr13:36944282..36944300,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23111|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18514|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000494062_5end|coexpression_cluster_id=C4|description=CAGE_peak_7_at_SPG20_5end|id=chr13:36944282..36944300,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.71e-25;82!UBERON:0006241;1.23e-13;3!UBERON:0003057;1.23e-13;3!UBERON:0006215;3.97e-12;3!UBERON:0010122;3.25e-09;2!UBERON:0002532;2.42e-07;206!UBERON:0010316;2.42e-07;206|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.60e-106!57;UBERON:0005068!4.60e-106!57;UBERON:0006241!4.60e-106!57;UBERON:0007135!4.60e-106!57;UBERON:0002616!3.41e-87!59;UBERON:0001017!5.87e-81!82;UBERON:0005743!2.93e-80!86;UBERON:0000955!4.00e-80!69;UBERON:0006238!4.00e-80!69;UBERON:0000073!2.09e-75!94;UBERON:0001016!2.09e-75!94;UBERON:0002780!4.09e-75!41;UBERON:0001890!4.09e-75!41;UBERON:0006240!4.09e-75!41;UBERON:0003075!5.77e-74!86;UBERON:0007284!5.77e-74!86;UBERON:0002020!1.18e-73!34;UBERON:0003528!1.18e-73!34;UBERON:0007023!1.89e-73!115;UBERON:0001893!2.33e-73!34;UBERON:0003080!3.53e-73!42;UBERON:0002346!2.99e-70!90;UBERON:0002791!3.44e-70!33;UBERON:0001869!1.93e-66!32;UBERON:0003056!1.81e-51!61;UBERON:0002619!5.44e-51!22;UBERON:0000033!1.21e-45!123;UBERON:0001950!9.35e-45!20;UBERON:0000956!1.56e-44!25;UBERON:0000203!1.56e-44!25;UBERON:0000153!4.47e-43!129;UBERON:0007811!4.47e-43!129;UBERON:0004121!8.98e-38!169;UBERON:0000924!1.15e-36!173;UBERON:0006601!1.15e-36!173;UBERON:0003076!1.91e-32!15;UBERON:0003057!1.91e-32!15;UBERON:0002308!5.51e-32!9;UBERON:0000125!5.51e-32!9;UBERON:0002420!5.40e-31!9;UBERON:0007245!5.40e-31!9;UBERON:0010009!5.40e-31!9;UBERON:0010011!5.40e-31!9;UBERON:0000454!5.40e-31!9;UBERON:0000025!3.74e-27!194;UBERON:0004732!4.46e-26!13;UBERON:0009663!6.71e-25!7;UBERON:0004733!7.84e-23!12;UBERON:0002028!7.84e-23!12;UBERON:0007277!7.84e-23!12;UBERON:0002298!1.91e-22!8;UBERON:0004111!5.30e-21!241;UBERON:0000200!5.88e-21!6;UBERON:0000349!2.25e-17!5;UBERON:0000477!4.45e-17!286;UBERON:0000483!6.69e-16!309;UBERON:0000119!1.21e-15!312;UBERON:0001871!1.87e-15!7;UBERON:0000369!2.06e-14!4;UBERON:0002435!2.06e-14!4;UBERON:0000204!2.06e-14!4;UBERON:0010082!2.06e-14!4;UBERON:0000475!2.61e-14!365;UBERON:0000064!3.08e-14!219;UBERON:0002680!8.41e-14!9;UBERON:0001895!8.41e-14!9;UBERON:0010092!8.41e-14!9;UBERON:0006331!2.07e-12!3;UBERON:0000988!3.00e-12!3;UBERON:0002021!4.95e-12!5;UBERON:0002240!6.25e-12!3;UBERON:0001896!1.00e-11!3;UBERON:0005290!1.00e-11!3;UBERON:0010096!1.00e-11!3;UBERON:0002771!1.12e-11!3;UBERON:0001872!1.70e-11!5;UBERON:0005383!3.36e-11!3;UBERON:0005382!3.36e-11!3;UBERON:0000062!1.61e-09!511;UBERON:0002148!8.26e-09!2;UBERON:0009662!8.26e-09!2;UBERON:0001897!8.90e-09!2;UBERON:0005162!9.24e-09!2;UBERON:0000122!9.24e-09!2;UBERON:0001875!1.20e-08!2;UBERON:0006514!1.20e-08!2;UBERON:0001873!4.27e-08!2;UBERON:0010122!4.27e-08!2;UBERON:0001870!4.75e-08!2;UBERON:0001954!4.75e-08!2;UBERON:0003022!4.75e-08!2;UBERON:0002421!4.75e-08!2;UBERON:0002600!4.75e-08!2;UBERON:0001876!8.35e-08!2;UBERON:0000481!2.06e-07!347;UBERON:0005174!2.63e-07!5;UBERON:0001137!2.63e-07!5|ontology_enrichment_uberon_v019=UBERON:0001893;1.46e-73;34!UBERON:0003528;1.04e-71;34!UBERON:0002020;1.04e-71;34!UBERON:0002791;1.24e-69;32!UBERON:0001869;2.37e-69;32!UBERON:0000073;2.68e-63;53!UBERON:0002616;2.68e-63;53!UBERON:0002780;2.32e-62;41!UBERON:0001890;2.32e-62;41!UBERON:0002619;1.35e-59;22!UBERON:0001950;2.68e-52;20!UBERON:0000956;3.49e-52;25!UBERON:0000203;3.49e-52;25!UBERON:0001017;1.28e-42;75!UBERON:0000955;8.87e-41;68!UBERON:0000125;3.88e-37;9!UBERON:0002308;3.88e-37;9!UBERON:0002420;6.48e-36;9!UBERON:0007245;6.48e-36;9!UBERON:0010009;6.48e-36;9!UBERON:0010011;6.48e-36;9!UBERON:0000454;6.48e-36;9!UBERON:0001016;6.79e-34;83!UBERON:0004732;2.09e-30;13!UBERON:0009663;7.59e-29;7!UBERON:0004733;1.26e-26;12!UBERON:0002028;1.26e-26;12!UBERON:0002298;1.10e-25;6!UBERON:0000200;2.86e-24;6!UBERON:0007023;8.95e-21;114!UBERON:0000349;5.78e-20;5!UBERON:0000369;1.40e-16;4!UBERON:0002435;1.40e-16;4!UBERON:0000204;1.40e-16;4!UBERON:0002680;4.67e-16;9!UBERON:0001895;4.67e-16;9!UBERON:0001871;2.62e-14;6!UBERON:0000988;4.81e-14;3!UBERON:0002021;7.55e-14;5!UBERON:0002240;1.23e-13;3!UBERON:0005174;1.23e-13;3!UBERON:0001137;1.23e-13;3!UBERON:0011216;1.45e-13;132!UBERON:0001896;2.09e-13;3!UBERON:0005290;2.09e-13;3!UBERON:0001872;3.09e-13;5!UBERON:0001870;4.71e-13;3!UBERON:0005383;7.89e-13;3!UBERON:0005382;7.89e-13;3!UBERON:0010314;3.61e-10;132!UBERON:0001897;4.87e-10;2!UBERON:0010225;4.87e-10;2!UBERON:0002148;4.98e-10;2!UBERON:0006331;4.98e-10;2!UBERON:0009662;4.98e-10;2!UBERON:0005162;5.93e-10;2!UBERON:0000122;5.93e-10;2!UBERON:0001875;7.69e-10;2!UBERON:0006514;7.69e-10;2!UBERON:0002771;1.73e-09;2!UBERON:0001873;3.25e-09;2!UBERON:000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18514 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000494062_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_7_at_SPG20_5end | |||
|id=chr13:36944282..36944300,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.71e-25;82!UBERON:0006241;1.23e-13;3!UBERON:0003057;1.23e-13;3!UBERON:0006215;3.97e-12;3!UBERON:0010122;3.25e-09;2!UBERON:0002532;2.42e-07;206!UBERON:0010316;2.42e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@SPG20 | |||
}} |
Revision as of 02:07, 11 September 2013
Short description: | p7@SPG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SPG20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000494062_5end |
EntrezGene: | SPG20 |
HGNC: | 18514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.