FFCP PHASE1:Hg19::chr19:14223322..14223363,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5566|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9380|TSSclassifier=S|UniProt=B7Z708|association_with_transcript=95bp_to_ENST00000536649,uc010xnm.1_5end|description=CAGE_peak_3_at_PRKACA_5end|id=chr19:14223322..14223363,-|ontology_enrichment_celltype=CL:0000055!3.81e-12!180;CL:0000680!3.02e-10!57;CL:0000056!3.02e-10!57;CL:0000355!3.02e-10!57;CL:0000183!1.08e-09!59;CL:0000187!5.42e-09!54;CL:0000393!5.26e-07!60;CL:0000211!5.26e-07!60|ontology_enrichment_celltype_v019=CL:0000680;7.56e-11;7!CL:0000188;1.07e-10;9!CL:0000136;7.58e-07;13!CL:0002334;8.33e-07;12!CL:0000346;9.27e-07;3!CL:1000428;9.27e-07;3|ontology_enrichment_celltype_v019_2=CL:0000188,9.47e-11,9;CL:0000680,1.51e-10,58;CL:0000056,1.51e-10,58;CL:0000355,1.51e-10,58;CL:0000136,4.38e-09,15;CL:0000187,1.14e-08,55;CL:0000393,2.84e-07,61;CL:0000211,2.84e-07,61;CL:0002334,7.54e-07,12;CL:0000346,9.47e-07,3;CL:1000428,9.47e-07,3|ontology_enrichment_development_v019=CL:0000355;3.66e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004290!1.64e-13!70;UBERON:0000914!1.35e-12!83;UBERON:0002329!1.35e-12!83;UBERON:0003077!1.35e-12!83;UBERON:0003059!1.35e-12!83;UBERON:0007282!1.35e-12!83;UBERON:0009618!1.35e-12!83;UBERON:0007285!1.35e-12!83;UBERON:0001134!4.80e-12!61;UBERON:0002036!4.80e-12!61;UBERON:0003082!4.80e-12!61;UBERON:0002385!6.44e-12!63;UBERON:0001015!6.44e-12!63;UBERON:0000383!6.44e-12!63;UBERON:0000486!8.33e-11!82;UBERON:0007023!3.27e-10!115;UBERON:0000475!6.45e-10!365;UBERON:0007100!1.03e-09!27;UBERON:0002100!1.63e-09!216;UBERON:0000948!1.22e-08!24;UBERON:0005498!1.22e-08!24;UBERON:0004140!1.22e-08!24;UBERON:0009881!1.22e-08!24;UBERON:0004141!1.22e-08!24;UBERON:0003084!1.22e-08!24;UBERON:0007005!1.22e-08!24;UBERON:0004139!1.22e-08!24;UBERON:0004291!1.22e-08!24;UBERON:0005256!2.77e-08!143;UBERON:0000479!7.41e-08!787;UBERON:0000481!1.32e-07!347;UBERON:0000468!1.55e-07!659;UBERON:0004872!7.47e-07!84;UBERON:0000119!9.62e-07!312|ontology_enrichment_uberon_v019=UBERON:0001134;4.88e-14;16!UBERON:0002036;4.88e-14;16!UBERON:0004905;1.15e-07;8!UBERON:0000982;1.15e-07;8!UBERON:0004770;1.15e-07;8!UBERON:0002385;7.56e-07;31!UBERON:0001015;7.56e-07;31!UBERON:0000383;7.56e-07;31!UBERON:0000412;9.27e-07;3!UBERON:0001992;9.27e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007524,8.20e-13,73;UBERON:0002329,1.87e-12,71;UBERON:0003059,1.87e-12,71;UBERON:0007282,1.87e-12,71;UBERON:0004290,1.87e-12,71;UBERON:0009618,1.87e-12,71;UBERON:0003077,3.63e-12,72;UBERON:0007285,3.63e-12,72;UBERON:0001134,1.67e-11,62;UBERON:0002036,1.67e-11,62;UBERON:0003082,1.67e-11,62;UBERON:0007503,1.86e-11,78;UBERON:0000486,2.28e-11,83;UBERON:0002385,6.45e-11,64;UBERON:0001015,6.45e-11,64;UBERON:0000383,6.45e-11,64;UBERON:0003104,2.29e-08,160;UBERON:0009142,2.29e-08,160;UBERON:0004905,7.88e-08,8;UBERON:0000982,7.88e-08,8;UBERON:0004770,7.88e-08,8;UBERON:0000926,1.28e-07,315;UBERON:0004120,1.28e-07,315;UBERON:0006603,1.28e-07,315;UBERON:0005256,6.89e-07,122;UBERON:0000412,9.47e-07,3;UBERON:0001992,9.47e-07,3|phase1_expression=0.54503513781167,1.49870366723688,0,1.0007329835313,1.34088328328186,0,0,0,1.82829939739887,0,0,0,0,3.21792517696121,4.97096063591874,0,0,0.730310090387373,0.975865597581014,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.511450247374121,0,0.50133791063589,0.579386075843295,0,0,0,0,0.175669571386252,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,2.91250176828533,0.132409180813219,0.573673241497627,1.77334191099179,0.560677600142307,0,0.98667019366864,8.40269795579369,0.269421344139376,0.326923806226917,7.11379909931178,5.18558332031999,0,0.624320153660641,0,0.597794722207204,0,0,0.140450806702248,0.408308342509787,0.368502951935304,0.309977343527296,0,0,4.55080680969013,1.43723628363248,0,0,0,0,0.612975591598039,0.600952235626387,0.113432183160021,0.179389635688862,0,0.423863802319124,0,0,0.515281080091258,0.37223371266318,0.168776332241266,0.292311015483596,0,0.368199594569197,0,0,0,0.339121184620975,0,0,0,0,0,0,0.414644220061482,0.252320850875628,0,21.9029345261742,8.36213219650751,5.52539685409922,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,0.22001485746285,0,35.7656445851882,0,0.26593811658487,0,1.28603687131071,0,0,0.428933980974443,5.96883765930587,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,2.85273810081437,1.01346914667305,1.02738161275192,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,4.29420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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5566 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9380 | |||
|TSSclassifier=S | |||
|UniProt=B7Z708 | |||
|association_with_transcript=95bp_to_ENST00000536649,uc010xnm.1_5end | |||
|description=CAGE_peak_3_at_PRKACA_5end | |||
|id=chr19:14223322..14223363,- | |||
|ontology_enrichment_celltype=CL:0000055!3.81e-12!180;CL:0000680!3.02e-10!57;CL:0000056!3.02e-10!57;CL:0000355!3.02e-10!57;CL:0000183!1.08e-09!59;CL:0000187!5.42e-09!54;CL:0000393!5.26e-07!60;CL:0000211!5.26e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000680;7.56e-11;7!CL:0000188;1.07e-10;9!CL:0000136;7.58e-07;13!CL:0002334;8.33e-07;12!CL:0000346;9.27e-07;3!CL:1000428;9.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,9.47e-11,9;CL:0000680,1.51e-10,58;CL:0000056,1.51e-10,58;CL:0000355,1.51e-10,58;CL:0000136,4.38e-09,15;CL:0000187,1.14e-08,55;CL:0000393,2.84e-07,61;CL:0000211,2.84e-07,61;CL:0002334,7.54e-07,12;CL:0000346,9.47e-07,3;CL:1000428,9.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000355;3.66e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.64e-13!70;UBERON:0000914!1.35e-12!83;UBERON:0002329!1.35e-12!83;UBERON:0003077!1.35e-12!83;UBERON:0003059!1.35e-12!83;UBERON:0007282!1.35e-12!83;UBERON:0009618!1.35e-12!83;UBERON:0007285!1.35e-12!83;UBERON:0001134!4.80e-12!61;UBERON:0002036!4.80e-12!61;UBERON:0003082!4.80e-12!61;UBERON:0002385!6.44e-12!63;UBERON:0001015!6.44e-12!63;UBERON:0000383!6.44e-12!63;UBERON:0000486!8.33e-11!82;UBERON:0007023!3.27e-10!115;UBERON:0000475!6.45e-10!365;UBERON:0007100!1.03e-09!27;UBERON:0002100!1.63e-09!216;UBERON:0000948!1.22e-08!24;UBERON:0005498!1.22e-08!24;UBERON:0004140!1.22e-08!24;UBERON:0009881!1.22e-08!24;UBERON:0004141!1.22e-08!24;UBERON:0003084!1.22e-08!24;UBERON:0007005!1.22e-08!24;UBERON:0004139!1.22e-08!24;UBERON:0004291!1.22e-08!24;UBERON:0005256!2.77e-08!143;UBERON:0000479!7.41e-08!787;UBERON:0000481!1.32e-07!347;UBERON:0000468!1.55e-07!659;UBERON:0004872!7.47e-07!84;UBERON:0000119!9.62e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.88e-14;16!UBERON:0002036;4.88e-14;16!UBERON:0004905;1.15e-07;8!UBERON:0000982;1.15e-07;8!UBERON:0004770;1.15e-07;8!UBERON:0002385;7.56e-07;31!UBERON:0001015;7.56e-07;31!UBERON:0000383;7.56e-07;31!UBERON:0000412;9.27e-07;3!UBERON:0001992;9.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,8.20e-13,73;UBERON:0002329,1.87e-12,71;UBERON:0003059,1.87e-12,71;UBERON:0007282,1.87e-12,71;UBERON:0004290,1.87e-12,71;UBERON:0009618,1.87e-12,71;UBERON:0003077,3.63e-12,72;UBERON:0007285,3.63e-12,72;UBERON:0001134,1.67e-11,62;UBERON:0002036,1.67e-11,62;UBERON:0003082,1.67e-11,62;UBERON:0007503,1.86e-11,78;UBERON:0000486,2.28e-11,83;UBERON:0002385,6.45e-11,64;UBERON:0001015,6.45e-11,64;UBERON:0000383,6.45e-11,64;UBERON:0003104,2.29e-08,160;UBERON:0009142,2.29e-08,160;UBERON:0004905,7.88e-08,8;UBERON:0000982,7.88e-08,8;UBERON:0004770,7.88e-08,8;UBERON:0000926,1.28e-07,315;UBERON:0004120,1.28e-07,315;UBERON:0006603,1.28e-07,315;UBERON:0005256,6.89e-07,122;UBERON:0000412,9.47e-07,3;UBERON:0001992,9.47e-07,3 | |||
|phase1_expression=0.54503513781167,1.49870366723688,0,1.0007329835313,1.34088328328186,0,0,0,1.82829939739887,0,0,0,0,3.21792517696121,4.97096063591874,0,0,0.730310090387373,0.975865597581014,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.511450247374121,0,0.50133791063589,0.579386075843295,0,0,0,0,0.175669571386252,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,2.91250176828533,0.132409180813219,0.573673241497627,1.77334191099179,0.560677600142307,0,0.98667019366864,8.40269795579369,0.269421344139376,0.326923806226917,7.11379909931178,5.18558332031999,0,0.624320153660641,0,0.597794722207204,0,0,0.140450806702248,0.408308342509787,0.368502951935304,0.309977343527296,0,0,4.55080680969013,1.43723628363248,0,0,0,0,0.612975591598039,0.600952235626387,0.113432183160021,0.179389635688862,0,0.423863802319124,0,0,0.515281080091258,0.37223371266318,0.168776332241266,0.292311015483596,0,0.368199594569197,0,0,0,0.339121184620975,0,0,0,0,0,0,0.414644220061482,0.252320850875628,0,21.9029345261742,8.36213219650751,5.52539685409922,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0,0.22001485746285,0,35.7656445851882,0,0.26593811658487,0,1.28603687131071,0,0,0.428933980974443,5.96883765930587,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,2.85273810081437,1.01346914667305,1.02738161275192,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,4.2942022101699,7.50255781589516,0.542530047399471,0,0.892144943985809,0.315404830067869,0.117141414992713,2.10662269809403,0,1.03473071292505,0,1.29058417979192,0.781952530212746,27.9995655171719,5.14715135716284,0,0,0,0,0,0.30239029332968,1.73675465473144,0.153461973288062,0,0.896974044789907,1.02341449813341,0.160853921143607,1.48418066444991,1.07946785661859,1.59805552781814,3.53146770859379,1.55776328755086,1.62694529843943,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0,1.13733384070897,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0.574265537996172,0,6.42735719376638,1.64340221096607,2.31072925671967,1.5350367472613,0,11.386545956037,7.54086808353988,1.44885266607372,1.06838442776085,0,0,0,0,0,0,0.6970372701606,0.924100740528266,2.12922412126809,0,1.11194531462352,0.143124886741991,2.97726695487734,2.21465597303108,0,0.511795582622668,0.42793898803392,14.3191461566672,0,0.899362287916574,0.54907405947211,0.471249609382746,3.23491970517306,0,8.8464275810186,0,1.70599442741899,0,0.272999822815972,0,2.26016233240486,2.2054613741845,1.32687795048244,1.31535265576129,1.15755106853338,0,0.202910376962704,0,0.563391205064483,0,0,0,0,4.64436797654861,1.97576935775941,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,11.8574718951495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.73254089635947,0.121360521749513,0,0,0,0,0,0,0,0,0,0.211125408127993,2.19172787076177,0,0,0,0,0,0,0,0,0.591860433821602,0,20.0046582260346,0,0,0,1.04171104434093,1.74919999992391,2.89999830173917,0,0,0.709163045303809,0,0,0.347249989866585,0,0,0,0.995213339381022,0.591095237907095,0.219385397153973,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0.269604531922708,1.60515529459758,0,0,0.391329237864179,0,3.55125962564451,1.20990716048664,0,0.758238955541855,0,0,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0,8.73633341210151,0.171986032471617,0,0,0,1.26085721434945,0,0.225980740780532,0,0,0.0633107959558787,0.391102765469606,0,0.426905989478705,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0.273810757783986,0,0.429765441419957,0,0.558564802544508,0.916641696046735,1.43574604915363,0.199679000498991,0.429226048136571,2.23171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.367182116944987,0,0,0,1.42939065274673,0,0,0,0.864221491201268,0.326587360109409,0,0,6.47474482784602,0.339936274560377,0,0,0.646414781807753,0.92562821219883,0,1.40963004463334,0.213574825135389,0.157204305099666,0,1.48849806543585,0,0,0,8.16026705054211,1.5041393641362,5.20787480497885,7.2131978756157,0,0,0,0,1.14681839138014,0.332787154610557,1.8628920882415,2.21357815897969,0.124980407962107,0,0,0,1.40500471742064,0,2.23882204330311,0.467426619694449,0.554805861502613,0.947015026375446,4.52822223154635,4.44905610798268,0.686520205190771,2.57092570397506,2.95330681107283,4.43565449968902,0.318593534327405,0,0.621051827505038,0,0,0,0,0,0,4.00067050245631,0.107410557042488,0.464033759878494,0.398095888698616,0,3.09056134664514,1.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| |||
|short_description=p3@PRKACA | |||
}} |
Revision as of 19:02, 11 September 2013
Short description: | p3@PRKACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PRKACA_5end |
Coexpression cluster: | NA |
Association with transcript: | 95bp_to_ENST00000536649, uc010xnm.1_5end |
EntrezGene: | PRKACA |
HGNC: | 9380 |
UniProt: | B7Z708 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 9.47e-11 | 9 |
muscle precursor cell | 1.51e-10 | 58 |
myoblast | 1.51e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.51e-10 | 58 |
fat cell | 4.38e-09 | 15 |
muscle cell | 1.14e-08 | 55 |
electrically responsive cell | 2.84e-07 | 61 |
electrically active cell | 2.84e-07 | 61 |
preadipocyte | 7.54e-07 | 12 |
hair follicle dermal papilla cell | 9.47e-07 | 3 |
stem cell of epidermis | 9.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 8.20e-13 | 73 |
somite | 1.87e-12 | 71 |
presomitic mesoderm | 1.87e-12 | 71 |
presumptive segmental plate | 1.87e-12 | 71 |
dermomyotome | 1.87e-12 | 71 |
trunk paraxial mesoderm | 1.87e-12 | 71 |
paraxial mesoderm | 3.63e-12 | 72 |
presumptive paraxial mesoderm | 3.63e-12 | 72 |
skeletal muscle tissue | 1.67e-11 | 62 |
striated muscle tissue | 1.67e-11 | 62 |
myotome | 1.67e-11 | 62 |
epithelial vesicle | 1.86e-11 | 78 |
multilaminar epithelium | 2.28e-11 | 83 |
muscle tissue | 6.45e-11 | 64 |
musculature | 6.45e-11 | 64 |
musculature of body | 6.45e-11 | 64 |
mesenchyme | 2.29e-08 | 160 |
entire embryonic mesenchyme | 2.29e-08 | 160 |
articulation | 7.88e-08 | 8 |
skeletal joint | 7.88e-08 | 8 |
articular system | 7.88e-08 | 8 |
mesoderm | 1.28e-07 | 315 |
mesoderm-derived structure | 1.28e-07 | 315 |
presumptive mesoderm | 1.28e-07 | 315 |
trunk mesenchyme | 6.89e-07 | 122 |
dermal papilla | 9.47e-07 | 3 |
papillary layer of dermis | 9.47e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.