FFCP PHASE1:Mm9::chr10:79479506..79479513,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70719|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=22bp_to_ENSMUST00000140974_5end|description=CAGE_peak_4_at_Hmha1_5end|id=chr10:79479506..79479513,+|ontology_enrichment_celltype=CL:0000988!1.00e-15!32;CL:0002032!1.00e-15!32;CL:0000037!1.00e-15!32;CL:0000566!1.00e-15!32;CL:0000837!1.00e-15!32;CL:0002031!2.58e-13!25;CL:0000049!4.10e-11!19;CL:0002320!2.55e-10!46;CL:0000134!2.55e-10!46;CL:0000763!1.51e-09!16;CL:0000839!7.74e-08!13;CL:0000738!1.32e-07!17;CL:0002087!1.32e-07!17;CL:0000219!5.32e-07!54;CL:0000838!8.49e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,1.38e-24,32;CL:0002032,1.38e-24,32;CL:0000037,1.38e-24,32;CL:0000837,1.38e-24,32;CL:0002320,3.71e-20,46;CL:0000134,3.71e-20,46;CL:0002031,1.95e-19,25;CL:0000219,8.64e-16,54;CL:0000049,9.76e-16,19;CL:0000763,6.76e-13,16;CL:0000738,2.04e-11,17;CL:0002087,2.04e-11,17;CL:0000838,8.18e-11,12;CL:0000839,7.40e-10,13;CL:0000542,8.99e-10,13;CL:0000051,8.99e-10,13;CL:0000084,1.35e-09,11;CL:0000827,1.35e-09,11;CL:0000034,3.22e-09,97;CL:0000050,2.62e-08,9;CL:0000723,3.86e-08,91;CL:0000048,3.86e-08,91;CL:0000791,1.85e-07,9;CL:0000789,1.85e-07,9;CL:0002420,1.85e-07,9;CL:0002419,1.85e-07,9;CL:0000790,1.85e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,5.01e-08,6|ontology_enrichment_uberon=UBERON:0002405!3.14e-21!70;UBERON:0002193!4.66e-21!48;UBERON:0002390!1.94e-19!45;UBERON:0003061!1.94e-19!45;UBERON:0005057!2.21e-11!51;UBERON:0004177!5.95e-11!29;UBERON:0003081!7.16e-11!88;UBERON:0002384!2.55e-10!46;UBERON:0002371!2.06e-09!16;UBERON:0003408!4.21e-09!24;UBERON:0001474!5.50e-09!22;UBERON:0004765!5.50e-09!22;UBERON:0001434!5.50e-09!22;UBERON:0006562!1.13e-08!24;UBERON:0001557!1.13e-08!24;UBERON:0001042!1.13e-08!24;UBERON:0008814!1.13e-08!24;UBERON:0009145!1.13e-08!24;UBERON:0002370!1.17e-08!23;UBERON:0000974!1.17e-08!23;UBERON:0004807!1.17e-08!23;UBERON:0005058!1.17e-08!23;UBERON:0003351!1.17e-08!23;UBERON:0009113!1.17e-08!23;UBERON:0003295!1.17e-08!23;UBERON:0009722!1.17e-08!23;UBERON:0005562!1.17e-08!23;UBERON:0007690!1.17e-08!23;UBERON:0002204!6.93e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.65e-34,48;UBERON:0002405,1.65e-34,48;UBERON:0002390,1.49e-31,45;UBERON:0003061,1.49e-31,45;UBERON:0002384,3.71e-20,46;UBERON:0004177,4.36e-19,29;UBERON:0005057,4.36e-19,29;UBERON:0003408,7.62e-17,24;UBERON:0000077,4.76e-16,35;UBERON:0002370,5.20e-16,23;UBERON:0000974,5.20e-16,23;UBERON:0004807,5.20e-16,23;UBERON:0005058,5.20e-16,23;UBERON:0003351,5.20e-16,23;UBERON:0009113,5.20e-16,23;UBERON:0003295,5.20e-16,23;UBERON:0009722,5.20e-16,23;UBERON:0005562,5.20e-16,23;UBERON:0007690,5.20e-16,23;UBERON:0006562,4.13e-15,24;UBERON:0001557,4.13e-15,24;UBERON:0001042,4.13e-15,24;UBERON:0008814,4.13e-15,24;UBERON:0009145,4.13e-15,24;UBERON:0003081,9.93e-14,87;UBERON:0000072,8.06e-13,27;UBERON:0002371,1.12e-12,16;UBERON:0001474,1.13e-09,22;UBERON:0004765,1.13e-09,22;UBERON:0001434,1.13e-09,22;UBERON:0007811,2.42e-09,36;UBERON:0000926,3.19e-09,120;UBERON:0004120,3.19e-09,120;UBERON:0006603,3.19e-09,120;UBERON:0001004,4.90e-09,42;UBERON:0002204,7.42e-09,32;UBERON:0000065,2.02e-08,41;UBERON:0001041,7.59e-08,80;UBERON:0000490,9.79e-08,66;UBERON:0003929,1.16e-07,55;UBERON:0000153,5.59e-07,43|phase1_expression=0,0,0,0,0,0,0,12.0084690800666,1.68946466582,2.10658073689794,0,0.239316476986009,12.1552518251156,10.8401298999557,2.33176833270964,2.42970320867791,0.699561878128147,5.36285681109004,7.54129384831563,3.39511721438424,0.255129870453209,6.65249373045932,4.4403964153619,1.11994695955385,1.83527424853736,0,0,0,0,1.00812051903972,0.221730510655305,1.27006134691926,2.46025915033828,15.8481681015439,0,0,0,12.5559489221072,7.0320181007142,3.14114246384279,7.64700934440319,15.7100461540443,6.79714494243615,0,0,0,0,0,0,0,0,0,8.55691290894455,13.0565185562042,20.1656279485478,0,0,0,0,0,0,0,0,3.5995988691256,2.96659908770092,1.4209602298922,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,2.02905142091174,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,7.25026074212081,0,0,0,0,0.150722640552623,0.470354828542819,0,0,0.722996784599558,3.5384422077995,0.647067399789637,0.662524555381181,0.969750506270444,0,0,0.209446706813455,0.510914110417183,2.15667224110656,2.99951365496704,3.30382590389968,0,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,1.11966273549084,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,3.51106593656617,3.08817488537658,4.54661599032948,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0.630869845692382,0,0.660837565967596,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0,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| ||
|EntrezGene=70719 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt= | |||
|association_with_transcript=22bp_to_ENSMUST00000140974_5end | |||
|description=CAGE_peak_4_at_Hmha1_5end | |||
|id=chr10:79479506..79479513,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.00e-15!32;CL:0002032!1.00e-15!32;CL:0000037!1.00e-15!32;CL:0000566!1.00e-15!32;CL:0000837!1.00e-15!32;CL:0002031!2.58e-13!25;CL:0000049!4.10e-11!19;CL:0002320!2.55e-10!46;CL:0000134!2.55e-10!46;CL:0000763!1.51e-09!16;CL:0000839!7.74e-08!13;CL:0000738!1.32e-07!17;CL:0002087!1.32e-07!17;CL:0000219!5.32e-07!54;CL:0000838!8.49e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.38e-24,32;CL:0002032,1.38e-24,32;CL:0000037,1.38e-24,32;CL:0000837,1.38e-24,32;CL:0002320,3.71e-20,46;CL:0000134,3.71e-20,46;CL:0002031,1.95e-19,25;CL:0000219,8.64e-16,54;CL:0000049,9.76e-16,19;CL:0000763,6.76e-13,16;CL:0000738,2.04e-11,17;CL:0002087,2.04e-11,17;CL:0000838,8.18e-11,12;CL:0000839,7.40e-10,13;CL:0000542,8.99e-10,13;CL:0000051,8.99e-10,13;CL:0000084,1.35e-09,11;CL:0000827,1.35e-09,11;CL:0000034,3.22e-09,97;CL:0000050,2.62e-08,9;CL:0000723,3.86e-08,91;CL:0000048,3.86e-08,91;CL:0000791,1.85e-07,9;CL:0000789,1.85e-07,9;CL:0002420,1.85e-07,9;CL:0002419,1.85e-07,9;CL:0000790,1.85e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.01e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002405!3.14e-21!70;UBERON:0002193!4.66e-21!48;UBERON:0002390!1.94e-19!45;UBERON:0003061!1.94e-19!45;UBERON:0005057!2.21e-11!51;UBERON:0004177!5.95e-11!29;UBERON:0003081!7.16e-11!88;UBERON:0002384!2.55e-10!46;UBERON:0002371!2.06e-09!16;UBERON:0003408!4.21e-09!24;UBERON:0001474!5.50e-09!22;UBERON:0004765!5.50e-09!22;UBERON:0001434!5.50e-09!22;UBERON:0006562!1.13e-08!24;UBERON:0001557!1.13e-08!24;UBERON:0001042!1.13e-08!24;UBERON:0008814!1.13e-08!24;UBERON:0009145!1.13e-08!24;UBERON:0002370!1.17e-08!23;UBERON:0000974!1.17e-08!23;UBERON:0004807!1.17e-08!23;UBERON:0005058!1.17e-08!23;UBERON:0003351!1.17e-08!23;UBERON:0009113!1.17e-08!23;UBERON:0003295!1.17e-08!23;UBERON:0009722!1.17e-08!23;UBERON:0005562!1.17e-08!23;UBERON:0007690!1.17e-08!23;UBERON:0002204!6.93e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.65e-34,48;UBERON:0002405,1.65e-34,48;UBERON:0002390,1.49e-31,45;UBERON:0003061,1.49e-31,45;UBERON:0002384,3.71e-20,46;UBERON:0004177,4.36e-19,29;UBERON:0005057,4.36e-19,29;UBERON:0003408,7.62e-17,24;UBERON:0000077,4.76e-16,35;UBERON:0002370,5.20e-16,23;UBERON:0000974,5.20e-16,23;UBERON:0004807,5.20e-16,23;UBERON:0005058,5.20e-16,23;UBERON:0003351,5.20e-16,23;UBERON:0009113,5.20e-16,23;UBERON:0003295,5.20e-16,23;UBERON:0009722,5.20e-16,23;UBERON:0005562,5.20e-16,23;UBERON:0007690,5.20e-16,23;UBERON:0006562,4.13e-15,24;UBERON:0001557,4.13e-15,24;UBERON:0001042,4.13e-15,24;UBERON:0008814,4.13e-15,24;UBERON:0009145,4.13e-15,24;UBERON:0003081,9.93e-14,87;UBERON:0000072,8.06e-13,27;UBERON:0002371,1.12e-12,16;UBERON:0001474,1.13e-09,22;UBERON:0004765,1.13e-09,22;UBERON:0001434,1.13e-09,22;UBERON:0007811,2.42e-09,36;UBERON:0000926,3.19e-09,120;UBERON:0004120,3.19e-09,120;UBERON:0006603,3.19e-09,120;UBERON:0001004,4.90e-09,42;UBERON:0002204,7.42e-09,32;UBERON:0000065,2.02e-08,41;UBERON:0001041,7.59e-08,80;UBERON:0000490,9.79e-08,66;UBERON:0003929,1.16e-07,55;UBERON:0000153,5.59e-07,43 | |||
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|short_description=p4@Hmha1 | |||
}} |
Revision as of 17:33, 12 September 2013
Short description: | p4@Hmha1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hmha1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 22bp_to_ENSMUST00000140974_5end |
EntrezGene: | Hmha1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.38e-24 | 32 |
hematopoietic oligopotent progenitor cell | 1.38e-24 | 32 |
hematopoietic stem cell | 1.38e-24 | 32 |
hematopoietic multipotent progenitor cell | 1.38e-24 | 32 |
connective tissue cell | 3.71e-20 | 46 |
mesenchymal cell | 3.71e-20 | 46 |
hematopoietic lineage restricted progenitor cell | 1.95e-19 | 25 |
motile cell | 8.64e-16 | 54 |
common myeloid progenitor | 9.76e-16 | 19 |
myeloid cell | 6.76e-13 | 16 |
leukocyte | 2.04e-11 | 17 |
nongranular leukocyte | 2.04e-11 | 17 |
lymphoid lineage restricted progenitor cell | 8.18e-11 | 12 |
myeloid lineage restricted progenitor cell | 7.40e-10 | 13 |
lymphocyte | 8.99e-10 | 13 |
common lymphoid progenitor | 8.99e-10 | 13 |
T cell | 1.35e-09 | 11 |
pro-T cell | 1.35e-09 | 11 |
stem cell | 3.22e-09 | 97 |
megakaryocyte-erythroid progenitor cell | 2.62e-08 | 9 |
somatic stem cell | 3.86e-08 | 91 |
multi fate stem cell | 3.86e-08 | 91 |
mature alpha-beta T cell | 1.85e-07 | 9 |
alpha-beta T cell | 1.85e-07 | 9 |
immature T cell | 1.85e-07 | 9 |
mature T cell | 1.85e-07 | 9 |
immature alpha-beta T cell | 1.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.01e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.