FFCP PHASE1:Mm9::chr11:56825245..56825284,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14799|HGNC=|MCL_coexpression_id=1|UniProt=P23818|association_with_transcript=-27bp_to_ENSMUST00000036315_5end|description=CAGE_peak_2_at_Gria1_5end|id=chr11:56825245..56825284,+|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0000540!2.25e-09!33;CL:0000047!2.25e-09!33;CL:0000031!2.25e-09!33;CL:0000404!2.25e-09!33;CL:0002319!3.05e-09!43;CL:0000221!4.62e-09!44;CL:0000133!4.62e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-18,23;CL:0000337,3.51e-18,23;CL:0000540,4.00e-10,33;CL:0000047,4.00e-10,33;CL:0000031,4.00e-10,33;CL:0000404,4.00e-10,33;CL:0002319,6.24e-10,43;CL:0000221,1.69e-09,44;CL:0000133,1.69e-09,44;CL:0000393,2.07e-07,39;CL:0000211,2.07e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.70e-26!73;UBERON:0005743!1.70e-26!73;UBERON:0001049!4.17e-26!52;UBERON:0005068!4.17e-26!52;UBERON:0006241!4.17e-26!52;UBERON:0007135!4.17e-26!52;UBERON:0000073!1.15e-25!75;UBERON:0001016!1.15e-25!75;UBERON:0000955!2.42e-25!50;UBERON:0006238!2.42e-25!50;UBERON:0002616!1.63e-24!49;UBERON:0000033!1.39e-22!63;UBERON:0002020!1.81e-21!34;UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0003080!1.67e-20!40;UBERON:0002780!8.81e-20!39;UBERON:0001890!8.81e-20!39;UBERON:0006240!8.81e-20!39;UBERON:0003056!1.24e-19!49;UBERON:0002791!1.51e-18!29;UBERON:0003528!1.51e-18!29;UBERON:0001893!1.51e-18!29;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0000956!1.53e-13!21;UBERON:0001869!1.53e-13!21;UBERON:0000203!1.53e-13!21;UBERON:0000025!4.38e-13!114;UBERON:0004111!2.60e-12!122;UBERON:0007811!9.76e-12!86;UBERON:0002619!1.17e-11!17;UBERON:0000153!3.60e-10!94;UBERON:0002021!4.37e-08!10;UBERON:0000411!4.37e-08!10;UBERON:0001950!4.37e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.54e-36,54;UBERON:0001049,1.40e-33,52;UBERON:0005068,1.40e-33,52;UBERON:0006241,1.40e-33,52;UBERON:0007135,1.40e-33,52;UBERON:0001017,6.07e-31,73;UBERON:0002020,1.41e-29,34;UBERON:0001016,1.51e-29,75;UBERON:0000955,1.66e-29,47;UBERON:0006238,1.66e-29,47;UBERON:0002616,2.19e-28,46;UBERON:0002346,4.05e-26,64;UBERON:0003075,4.05e-26,64;UBERON:0007284,4.05e-26,64;UBERON:0003528,1.86e-25,29;UBERON:0002791,1.86e-25,29;UBERON:0001893,1.86e-25,29;UBERON:0003080,2.73e-25,40;UBERON:0002780,2.67e-24,39;UBERON:0001890,2.67e-24,39;UBERON:0006240,2.67e-24,39;UBERON:0004121,1.03e-20,95;UBERON:0000924,1.03e-20,95;UBERON:0006601,1.03e-20,95;UBERON:0010371,1.24e-20,73;UBERON:0003056,2.80e-20,49;UBERON:0000956,2.10e-18,21;UBERON:0001869,2.10e-18,21;UBERON:0000203,2.10e-18,21;UBERON:0010314,4.94e-18,92;UBERON:0002619,9.30e-16,17;UBERON:0000025,1.03e-13,114;UBERON:0004111,1.43e-11,122;UBERON:0002021,9.75e-11,10;UBERON:0000411,9.75e-11,10;UBERON:0001950,9.75e-11,10;UBERON:0003076,1.71e-08,12;UBERON:0003057,1.71e-08,12;UBERON:0002420,4.08e-08,8;UBERON:0007245,4.08e-08,8;UBERON:0010009,4.08e-08,8;UBERON:0010011,4.08e-08,8;UBERON:0000454,4.08e-08,8|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,9.43980520676875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,5.27246838562732,7.97162586204562,0.55994568650145,8.62515386189829,0,0,0,0,0,0,5.26022798234954,5.81890077199236,9.50747105259269,0.338844532069132,1.77858959222228,0,0,0,0,1.53687322128622,6.53244557543409,5.53524347159932,2.73422449756797,13.7112472513826,12.1477697523387,5.87955836231779,7.47594673942244,7.35375029288017,23.1243350098716,38.5615761017267,32.1037654505549,10.2871304429551,14.6380229763855,11.4600941522487,16.7509799400829,31.5147061617741,36.977175961988,13.5529149317887,19.362548588678,10.6247684120421,0,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0,0,0,0,0,0,0,0,31.9131068742586,50.0577629284158,0,0,0,0,34.9012189813237,51.2400675156862,19.9790419859454,44.8466746096073,42.4487659168349,30.9604186393745,47.8611726049885,0.101839363850316,0,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0,0.753524089178575,0.816437989815934,1.15302348256365,0.937017245597288,4.9153640440413,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0.828503090142008,0.703578179943289,1.62055855314913,1.89395788468168,1.96764231747404,3.70241070929708,2.55787339225449,1.87791380979733,2.10177616260905,0.658239399653922,0.492502392237286,0.324275238183423,0.146199987425332,0.219550115291051,0.134206418760372,85.7982990141639,26.4464853814761,0,0,0,0.696710015581316,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,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| ||
|EntrezGene=14799 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P23818 | |||
|association_with_transcript=-27bp_to_ENSMUST00000036315_5end | |||
|description=CAGE_peak_2_at_Gria1_5end | |||
|id=chr11:56825245..56825284,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0000540!2.25e-09!33;CL:0000047!2.25e-09!33;CL:0000031!2.25e-09!33;CL:0000404!2.25e-09!33;CL:0002319!3.05e-09!43;CL:0000221!4.62e-09!44;CL:0000133!4.62e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-18,23;CL:0000337,3.51e-18,23;CL:0000540,4.00e-10,33;CL:0000047,4.00e-10,33;CL:0000031,4.00e-10,33;CL:0000404,4.00e-10,33;CL:0002319,6.24e-10,43;CL:0000221,1.69e-09,44;CL:0000133,1.69e-09,44;CL:0000393,2.07e-07,39;CL:0000211,2.07e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.70e-26!73;UBERON:0005743!1.70e-26!73;UBERON:0001049!4.17e-26!52;UBERON:0005068!4.17e-26!52;UBERON:0006241!4.17e-26!52;UBERON:0007135!4.17e-26!52;UBERON:0000073!1.15e-25!75;UBERON:0001016!1.15e-25!75;UBERON:0000955!2.42e-25!50;UBERON:0006238!2.42e-25!50;UBERON:0002616!1.63e-24!49;UBERON:0000033!1.39e-22!63;UBERON:0002020!1.81e-21!34;UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0003080!1.67e-20!40;UBERON:0002780!8.81e-20!39;UBERON:0001890!8.81e-20!39;UBERON:0006240!8.81e-20!39;UBERON:0003056!1.24e-19!49;UBERON:0002791!1.51e-18!29;UBERON:0003528!1.51e-18!29;UBERON:0001893!1.51e-18!29;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0000956!1.53e-13!21;UBERON:0001869!1.53e-13!21;UBERON:0000203!1.53e-13!21;UBERON:0000025!4.38e-13!114;UBERON:0004111!2.60e-12!122;UBERON:0007811!9.76e-12!86;UBERON:0002619!1.17e-11!17;UBERON:0000153!3.60e-10!94;UBERON:0002021!4.37e-08!10;UBERON:0000411!4.37e-08!10;UBERON:0001950!4.37e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.54e-36,54;UBERON:0001049,1.40e-33,52;UBERON:0005068,1.40e-33,52;UBERON:0006241,1.40e-33,52;UBERON:0007135,1.40e-33,52;UBERON:0001017,6.07e-31,73;UBERON:0002020,1.41e-29,34;UBERON:0001016,1.51e-29,75;UBERON:0000955,1.66e-29,47;UBERON:0006238,1.66e-29,47;UBERON:0002616,2.19e-28,46;UBERON:0002346,4.05e-26,64;UBERON:0003075,4.05e-26,64;UBERON:0007284,4.05e-26,64;UBERON:0003528,1.86e-25,29;UBERON:0002791,1.86e-25,29;UBERON:0001893,1.86e-25,29;UBERON:0003080,2.73e-25,40;UBERON:0002780,2.67e-24,39;UBERON:0001890,2.67e-24,39;UBERON:0006240,2.67e-24,39;UBERON:0004121,1.03e-20,95;UBERON:0000924,1.03e-20,95;UBERON:0006601,1.03e-20,95;UBERON:0010371,1.24e-20,73;UBERON:0003056,2.80e-20,49;UBERON:0000956,2.10e-18,21;UBERON:0001869,2.10e-18,21;UBERON:0000203,2.10e-18,21;UBERON:0010314,4.94e-18,92;UBERON:0002619,9.30e-16,17;UBERON:0000025,1.03e-13,114;UBERON:0004111,1.43e-11,122;UBERON:0002021,9.75e-11,10;UBERON:0000411,9.75e-11,10;UBERON:0001950,9.75e-11,10;UBERON:0003076,1.71e-08,12;UBERON:0003057,1.71e-08,12;UBERON:0002420,4.08e-08,8;UBERON:0007245,4.08e-08,8;UBERON:0010009,4.08e-08,8;UBERON:0010011,4.08e-08,8;UBERON:0000454,4.08e-08,8 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,9.43980520676875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,5.27246838562732,7.97162586204562,0.55994568650145,8.62515386189829,0,0,0,0,0,0,5.26022798234954,5.81890077199236,9.50747105259269,0.338844532069132,1.77858959222228,0,0,0,0,1.53687322128622,6.53244557543409,5.53524347159932,2.73422449756797,13.7112472513826,12.1477697523387,5.87955836231779,7.47594673942244,7.35375029288017,23.1243350098716,38.5615761017267,32.1037654505549,10.2871304429551,14.6380229763855,11.4600941522487,16.7509799400829,31.5147061617741,36.977175961988,13.5529149317887,19.362548588678,10.6247684120421,0,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0,0,0,0,0,0,0,0,31.9131068742586,50.0577629284158,0,0,0,0,34.9012189813237,51.2400675156862,19.9790419859454,44.8466746096073,42.4487659168349,30.9604186393745,47.8611726049885,0.101839363850316,0,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0,0.753524089178575,0.816437989815934,1.15302348256365,0.937017245597288,4.9153640440413,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0.828503090142008,0.703578179943289,1.62055855314913,1.89395788468168,1.96764231747404,3.70241070929708,2.55787339225449,1.87791380979733,2.10177616260905,0.658239399653922,0.492502392237286,0.324275238183423,0.146199987425332,0.219550115291051,0.134206418760372,85.7982990141639,26.4464853814761,0,0,0,0.696710015581316,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0.744281895337007,0,0,0.179397413521912,0,2.40179147216586,0.189491411770485,0,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.945810864637146,0.44292937929755,1.59454768657487,5.57135270033509,5.52591941970866,3.47157740595628,0,0,0,0,15.7339578188036,18.1678114217915,3.93443868904021,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0.891194696329576,0,0,0.292255857911312,0,54.3033024752854,0.283880170416537,0.534196811001766,2.28041743095006,1.81467135269789,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,9.53230896110606,0.18006109403131,0.129358683782755,0.643011105094777,0.709360934569094,1.24858172321449,1.31639216481697,1.8267896946876,0,0.21183207086382,0.661585194164886,0,0,0.0603129249281559,0,0,0,15.5757253688828,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.674321731924103,0.743881101528023,0.26175594198403,0.259229946583586,0,0,0,0,0.388902376688095,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.772758376128762,0.563047426353546,1.09890974560359,0.214368379079066,0,25.9785847603851,35.9053684475598,32.0821487526062,26.8090964456153,33.5690434687615,41.5466643564335,43.8764625150674,33.3237690385923,43.9548136714678,32.6188996403647,0.103787347584177,1.59609949360412,1.87806966329548,1.70174701947806,2.09613162627982,1.47074806760011,1.33348036680969,2.26638562962784,3.53011130550997,3.28506375292937,2.28131369901216,2.82939512079114,3.183811253976,2.62503124859964,3.61843454420364,2.85776214769844,3.47652977834566,1.73618298417335,4.53294490883637,1.61918812147837,3.42869252385415,3.54951612318675,2.62279808942053,3.48831399917588,2.82328141245992,4.3153450024755,3.10977553883713,4.20911538300549,3.12349461845482,2.80571135828869,2.25406534435931,2.46261205938909,0.818462086339379,2.47898945897546,1.73615949883027,5.9954538705107,2.57324769289949,3.22306581072447,0.956441660344217,0.882365676478062,0.695603506861264 | |||
|short_description=p2@Gria1 | |||
}} |
Revision as of 20:04, 12 September 2013
Short description: | p2@Gria1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gria1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -27bp_to_ENSMUST00000036315_5end |
EntrezGene: | Gria1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.51e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.51e-18 | 23 |
neuron | 4.00e-10 | 33 |
neuronal stem cell | 4.00e-10 | 33 |
neuroblast | 4.00e-10 | 33 |
electrically signaling cell | 4.00e-10 | 33 |
neural cell | 6.24e-10 | 43 |
ectodermal cell | 1.69e-09 | 44 |
neurectodermal cell | 1.69e-09 | 44 |
electrically responsive cell | 2.07e-07 | 39 |
electrically active cell | 2.07e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.