FFCP PHASE1:Mm9::chr11:69415954..69415967,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=303|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69415954..69415967,-|id=chr11:69415954..69415967,-|ontology_enrichment_celltype=CL:0002453!1.04e-07!8;CL:0000117!1.15e-07!23;CL:0000337!1.15e-07!23;CL:0000221!1.62e-07!44;CL:0000133!1.62e-07!44;CL:0002319!2.92e-07!43|ontology_enrichment_celltype_v019_2=CL:0002453,3.36e-17,8;CL:0000333,1.91e-13,10;CL:0000095,1.91e-13,10;CL:0000243,1.91e-13,10;CL:0000123,1.91e-13,10;CL:0000125,1.91e-13,10;CL:0000030,1.91e-13,10;CL:0000339,1.91e-13,10;CL:0002319,9.00e-13,43;CL:0000128,9.38e-13,6;CL:0000126,9.38e-13,6;CL:0000127,9.38e-13,6;CL:0000221,2.23e-12,44;CL:0000133,2.23e-12,44;CL:0000117,7.13e-08,23;CL:0000337,7.13e-08,23;CL:0002610,1.36e-07,3;CL:0002614,5.59e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.19e-19!73;UBERON:0005743!1.19e-19!73;UBERON:0000073!1.63e-18!75;UBERON:0001016!1.63e-18!75;UBERON:0001049!1.34e-17!52;UBERON:0005068!1.34e-17!52;UBERON:0006241!1.34e-17!52;UBERON:0007135!1.34e-17!52;UBERON:0000955!2.06e-17!50;UBERON:0006238!2.06e-17!50;UBERON:0000033!6.48e-17!63;UBERON:0002616!8.77e-17!49;UBERON:0002346!4.11e-16!71;UBERON:0003075!4.11e-16!71;UBERON:0007284!4.11e-16!71;UBERON:0004121!5.42e-16!102;UBERON:0000924!5.42e-16!102;UBERON:0006601!5.42e-16!102;UBERON:0002020!4.84e-14!34;UBERON:0003056!7.45e-12!49;UBERON:0002791!8.08e-12!29;UBERON:0003528!8.08e-12!29;UBERON:0001893!8.08e-12!29;UBERON:0003080!8.71e-11!40;UBERON:0002780!3.25e-10!39;UBERON:0001890!3.25e-10!39;UBERON:0006240!3.25e-10!39;UBERON:0002619!1.68e-09!17;UBERON:0000956!2.08e-09!21;UBERON:0001869!2.08e-09!21;UBERON:0000203!2.08e-09!21;UBERON:0002021!5.55e-09!10;UBERON:0000411!5.55e-09!10;UBERON:0001950!5.55e-09!10;UBERON:0003076!2.71e-08!12;UBERON:0003057!2.71e-08!12;UBERON:0007811!4.76e-08!86;UBERON:0000153!7.72e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.43e-35,73;UBERON:0001016,3.58e-34,75;UBERON:0000073,5.20e-34,54;UBERON:0001049,1.90e-30,52;UBERON:0005068,1.90e-30,52;UBERON:0006241,1.90e-30,52;UBERON:0007135,1.90e-30,52;UBERON:0004121,7.91e-27,95;UBERON:0000924,7.91e-27,95;UBERON:0006601,7.91e-27,95;UBERON:0002346,3.40e-25,64;UBERON:0003075,3.40e-25,64;UBERON:0007284,3.40e-25,64;UBERON:0000955,3.65e-24,47;UBERON:0006238,3.65e-24,47;UBERON:0002616,8.12e-23,46;UBERON:0002020,3.22e-21,34;UBERON:0010371,3.70e-21,73;UBERON:0002021,1.98e-20,10;UBERON:0000411,1.98e-20,10;UBERON:0001950,1.98e-20,10;UBERON:0003076,1.05e-19,12;UBERON:0003057,1.05e-19,12;UBERON:0002619,2.17e-16,17;UBERON:0003528,1.70e-15,29;UBERON:0002791,1.70e-15,29;UBERON:0001893,1.70e-15,29;UBERON:0010314,3.07e-15,92;UBERON:0000956,8.92e-15,21;UBERON:0001869,8.92e-15,21;UBERON:0000203,8.92e-15,21;UBERON:0003080,9.86e-15,40;UBERON:0002780,1.51e-13,39;UBERON:0001890,1.51e-13,39;UBERON:0006240,1.51e-13,39;UBERON:0003056,1.47e-12,49;UBERON:0004733,9.25e-12,6;UBERON:0004732,9.25e-12,6;UBERON:0002028,9.25e-12,6;UBERON:0007277,9.25e-12,6;UBERON:0000025,6.31e-10,114;UBERON:0002240,1.62e-09,6;UBERON:0005174,1.62e-09,6;UBERON:0001137,1.62e-09,6;UBERON:0004111,8.21e-09,122;UBERON:0011216,1.25e-08,194;UBERON:0002037,1.32e-08,4;UBERON:0002680,1.32e-08,4;UBERON:0001895,1.32e-08,4;UBERON:0010092,1.32e-08,4;UBERON:0006215,1.32e-08,4;UBERON:0002950,1.45e-08,4;UBERON:0001891,1.45e-08,4;UBERON:0009616,1.45e-08,4;UBERON:0010286,1.45e-08,4;UBERON:0001948,1.25e-07,5;UBERON:0002315,1.25e-07,5;UBERON:0004684,1.36e-07,3;UBERON:0002275,1.36e-07,3;UBERON:0002038,5.59e-07,3;UBERON:0009663,5.59e-07,3;UBERON:0009661,5.59e-07,3;UBERON:0000125,5.59e-07,3;UBERON:0002308,5.59e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0.699561878128147,0.157731082679119,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,3.48840250208714,3.07560655828261,10.4992145500113,2.93971485413261,2.87505128729943,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,12.2836045312546,21.9004434033286,0.103689612308478,0.405017814995072,0,4.28476476605705,4.8591079009355,0.122490799214954,0.191690942036473,0,5.50579404996943,7.15049093277051,6.29786786350598,0.131886287730194,0.731901148819277,0,10.3297709630511,1.12552522006336,3.81995619442025,7.36571463684169,7.54569908235246,0,0,0,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,1.76922110389975,0.161766849947409,0.441683036920787,0,0,2.34224637609238,2.72280718857492,0,0,0,0,2.54644086988199,0.457500602818626,0.251308704225729,1.04294592115366,0.767146371990992,2.90903262383384,1.62241263067758,0,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.640568601424249,0.468508622798644,2.84573707812917,0,0.189106080167819,0,0.219195732427575,0,0,0,0.1990342668184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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69415954..69415967,- | |||
|id=chr11:69415954..69415967,- | |||
|ontology_enrichment_celltype=CL:0002453!1.04e-07!8;CL:0000117!1.15e-07!23;CL:0000337!1.15e-07!23;CL:0000221!1.62e-07!44;CL:0000133!1.62e-07!44;CL:0002319!2.92e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.36e-17,8;CL:0000333,1.91e-13,10;CL:0000095,1.91e-13,10;CL:0000243,1.91e-13,10;CL:0000123,1.91e-13,10;CL:0000125,1.91e-13,10;CL:0000030,1.91e-13,10;CL:0000339,1.91e-13,10;CL:0002319,9.00e-13,43;CL:0000128,9.38e-13,6;CL:0000126,9.38e-13,6;CL:0000127,9.38e-13,6;CL:0000221,2.23e-12,44;CL:0000133,2.23e-12,44;CL:0000117,7.13e-08,23;CL:0000337,7.13e-08,23;CL:0002610,1.36e-07,3;CL:0002614,5.59e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.19e-19!73;UBERON:0005743!1.19e-19!73;UBERON:0000073!1.63e-18!75;UBERON:0001016!1.63e-18!75;UBERON:0001049!1.34e-17!52;UBERON:0005068!1.34e-17!52;UBERON:0006241!1.34e-17!52;UBERON:0007135!1.34e-17!52;UBERON:0000955!2.06e-17!50;UBERON:0006238!2.06e-17!50;UBERON:0000033!6.48e-17!63;UBERON:0002616!8.77e-17!49;UBERON:0002346!4.11e-16!71;UBERON:0003075!4.11e-16!71;UBERON:0007284!4.11e-16!71;UBERON:0004121!5.42e-16!102;UBERON:0000924!5.42e-16!102;UBERON:0006601!5.42e-16!102;UBERON:0002020!4.84e-14!34;UBERON:0003056!7.45e-12!49;UBERON:0002791!8.08e-12!29;UBERON:0003528!8.08e-12!29;UBERON:0001893!8.08e-12!29;UBERON:0003080!8.71e-11!40;UBERON:0002780!3.25e-10!39;UBERON:0001890!3.25e-10!39;UBERON:0006240!3.25e-10!39;UBERON:0002619!1.68e-09!17;UBERON:0000956!2.08e-09!21;UBERON:0001869!2.08e-09!21;UBERON:0000203!2.08e-09!21;UBERON:0002021!5.55e-09!10;UBERON:0000411!5.55e-09!10;UBERON:0001950!5.55e-09!10;UBERON:0003076!2.71e-08!12;UBERON:0003057!2.71e-08!12;UBERON:0007811!4.76e-08!86;UBERON:0000153!7.72e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.43e-35,73;UBERON:0001016,3.58e-34,75;UBERON:0000073,5.20e-34,54;UBERON:0001049,1.90e-30,52;UBERON:0005068,1.90e-30,52;UBERON:0006241,1.90e-30,52;UBERON:0007135,1.90e-30,52;UBERON:0004121,7.91e-27,95;UBERON:0000924,7.91e-27,95;UBERON:0006601,7.91e-27,95;UBERON:0002346,3.40e-25,64;UBERON:0003075,3.40e-25,64;UBERON:0007284,3.40e-25,64;UBERON:0000955,3.65e-24,47;UBERON:0006238,3.65e-24,47;UBERON:0002616,8.12e-23,46;UBERON:0002020,3.22e-21,34;UBERON:0010371,3.70e-21,73;UBERON:0002021,1.98e-20,10;UBERON:0000411,1.98e-20,10;UBERON:0001950,1.98e-20,10;UBERON:0003076,1.05e-19,12;UBERON:0003057,1.05e-19,12;UBERON:0002619,2.17e-16,17;UBERON:0003528,1.70e-15,29;UBERON:0002791,1.70e-15,29;UBERON:0001893,1.70e-15,29;UBERON:0010314,3.07e-15,92;UBERON:0000956,8.92e-15,21;UBERON:0001869,8.92e-15,21;UBERON:0000203,8.92e-15,21;UBERON:0003080,9.86e-15,40;UBERON:0002780,1.51e-13,39;UBERON:0001890,1.51e-13,39;UBERON:0006240,1.51e-13,39;UBERON:0003056,1.47e-12,49;UBERON:0004733,9.25e-12,6;UBERON:0004732,9.25e-12,6;UBERON:0002028,9.25e-12,6;UBERON:0007277,9.25e-12,6;UBERON:0000025,6.31e-10,114;UBERON:0002240,1.62e-09,6;UBERON:0005174,1.62e-09,6;UBERON:0001137,1.62e-09,6;UBERON:0004111,8.21e-09,122;UBERON:0011216,1.25e-08,194;UBERON:0002037,1.32e-08,4;UBERON:0002680,1.32e-08,4;UBERON:0001895,1.32e-08,4;UBERON:0010092,1.32e-08,4;UBERON:0006215,1.32e-08,4;UBERON:0002950,1.45e-08,4;UBERON:0001891,1.45e-08,4;UBERON:0009616,1.45e-08,4;UBERON:0010286,1.45e-08,4;UBERON:0001948,1.25e-07,5;UBERON:0002315,1.25e-07,5;UBERON:0004684,1.36e-07,3;UBERON:0002275,1.36e-07,3;UBERON:0002038,5.59e-07,3;UBERON:0009663,5.59e-07,3;UBERON:0009661,5.59e-07,3;UBERON:0000125,5.59e-07,3;UBERON:0002308,5.59e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0.699561878128147,0.157731082679119,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04152209913235,3.48840250208714,3.07560655828261,10.4992145500113,2.93971485413261,2.87505128729943,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,12.2836045312546,21.9004434033286,0.103689612308478,0.405017814995072,0,4.28476476605705,4.8591079009355,0.122490799214954,0.191690942036473,0,5.50579404996943,7.15049093277051,6.29786786350598,0.131886287730194,0.731901148819277,0,10.3297709630511,1.12552522006336,3.81995619442025,7.36571463684169,7.54569908235246,0,0,0,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,1.76922110389975,0.161766849947409,0.441683036920787,0,0,2.34224637609238,2.72280718857492,0,0,0,0,2.54644086988199,0.457500602818626,0.251308704225729,1.04294592115366,0.767146371990992,2.90903262383384,1.62241263067758,0,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.640568601424249,0.468508622798644,2.84573707812917,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0.407302655690628,0.387904974335251,0.140271639780637,0.0632365371242573,0.295220295959204,0.31399745568275,0.123397163921801,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,2.72936002979246,1.99259867206745,0,1.00988370881749,0,0,0,0,0.222798674082394,0,0,0,0,1.92792789853084,0.425820255624806,0.712262414669021,0,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,5.7481843623258,0,0.206386867963223,0.370389054739423,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0.844780627453891,1.17357238645754,0.781226309063701,1.04859344425711,0.483168241652012,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,6.7770221114048,5.9842280745933,8.02053718815155,2.92150409984269,3.42541259885321,3.7769694869485,2.02506750069542,6.30449684513909,4.53142408984205,5.69536342927002,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.114870937911227,0.476293691283074,0.347652977834566,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0,0.463735671240843 | |||
|short_description=p@chr11:69415954..69415967,- | |||
}} |
Revision as of 20:37, 12 September 2013
Short description: | p@chr11:69415954..69415967, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69415954..69415967, - |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.36e-17 | 8 |
migratory neural crest cell | 1.91e-13 | 10 |
neuron associated cell | 1.91e-13 | 10 |
glial cell (sensu Vertebrata) | 1.91e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 1.91e-13 | 10 |
glial cell | 1.91e-13 | 10 |
glioblast | 1.91e-13 | 10 |
glioblast (sensu Vertebrata) | 1.91e-13 | 10 |
neural cell | 9.00e-13 | 43 |
oligodendrocyte | 9.38e-13 | 6 |
macroglial cell | 9.38e-13 | 6 |
astrocyte | 9.38e-13 | 6 |
ectodermal cell | 2.23e-12 | 44 |
neurectodermal cell | 2.23e-12 | 44 |
CNS neuron (sensu Vertebrata) | 7.13e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.13e-08 | 23 |
raphe nuclei neuron | 1.36e-07 | 3 |
neuron of the substantia nigra | 5.59e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.