FFCP PHASE1:Mm9::chr11:98190918..98190951,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18013|HGNC=|MCL_coexpression_id=76|UniProt=Q3TYB2,Q62414|association_with_transcript=7bp_to_NM_010895,uc009vai.1_5end|description=CAGE_peak_1_at_Neurod2_5end|id=chr11:98190918..98190951,-|ontology_enrichment_celltype=CL:0000117!3.81e-17!23;CL:0000337!3.81e-17!23;CL:0000540!1.37e-10!33;CL:0000047!1.37e-10!33;CL:0000031!1.37e-10!33;CL:0000404!1.37e-10!33;CL:0000393!1.51e-07!39;CL:0000211!1.51e-07!39;CL:0002609!5.42e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,2.96e-21,23;CL:0000337,2.96e-21,23;CL:0000540,2.43e-12,33;CL:0000047,2.43e-12,33;CL:0000031,2.43e-12,33;CL:0000404,2.43e-12,33;CL:0000393,2.75e-09,39;CL:0000211,2.75e-09,39;CL:0002319,1.89e-08,43;CL:0002609,1.98e-08,6;CL:0000221,4.30e-08,44;CL:0000133,4.30e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.47e-25!52;UBERON:0005068!2.47e-25!52;UBERON:0006241!2.47e-25!52;UBERON:0007135!2.47e-25!52;UBERON:0000955!8.85e-24!50;UBERON:0006238!8.85e-24!50;UBERON:0002020!1.64e-23!34;UBERON:0002616!3.70e-23!49;UBERON:0001017!5.91e-22!73;UBERON:0005743!5.91e-22!73;UBERON:0000033!1.03e-21!63;UBERON:0000073!8.88e-21!75;UBERON:0001016!8.88e-21!75;UBERON:0002791!6.44e-20!29;UBERON:0003528!6.44e-20!29;UBERON:0001893!6.44e-20!29;UBERON:0003056!1.19e-19!49;UBERON:0002346!1.88e-19!71;UBERON:0003075!1.88e-19!71;UBERON:0007284!1.88e-19!71;UBERON:0003080!5.74e-19!40;UBERON:0002780!1.17e-18!39;UBERON:0001890!1.17e-18!39;UBERON:0006240!1.17e-18!39;UBERON:0000956!3.52e-15!21;UBERON:0001869!3.52e-15!21;UBERON:0000203!3.52e-15!21;UBERON:0004121!8.62e-15!102;UBERON:0000924!8.62e-15!102;UBERON:0006601!8.62e-15!102;UBERON:0007811!8.09e-13!86;UBERON:0002619!1.27e-11!17;UBERON:0000153!1.16e-10!94;UBERON:0002021!1.32e-09!10;UBERON:0000411!1.32e-09!10;UBERON:0001950!1.32e-09!10;UBERON:0003076!6.35e-07!12;UBERON:0003057!6.35e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.57e-30,34;UBERON:0000073,5.59e-29,54;UBERON:0001049,4.10e-27,52;UBERON:0005068,4.10e-27,52;UBERON:0006241,4.10e-27,52;UBERON:0007135,4.10e-27,52;UBERON:0003528,3.45e-25,29;UBERON:0002791,3.45e-25,29;UBERON:0001893,3.45e-25,29;UBERON:0002346,9.90e-25,64;UBERON:0003075,9.90e-25,64;UBERON:0007284,9.90e-25,64;UBERON:0001017,1.27e-23,73;UBERON:0000955,5.76e-23,47;UBERON:0006238,5.76e-23,47;UBERON:0001016,1.51e-22,75;UBERON:0002616,3.18e-22,46;UBERON:0010371,9.60e-20,73;UBERON:0000956,3.40e-19,21;UBERON:0001869,3.40e-19,21;UBERON:0000203,3.40e-19,21;UBERON:0003080,3.92e-19,40;UBERON:0003056,8.38e-19,49;UBERON:0002780,9.81e-19,39;UBERON:0001890,9.81e-19,39;UBERON:0006240,9.81e-19,39;UBERON:0004121,2.00e-18,95;UBERON:0000924,2.00e-18,95;UBERON:0006601,2.00e-18,95;UBERON:0002619,1.12e-14,17;UBERON:0010314,1.37e-12,92;UBERON:0002021,1.00e-11,10;UBERON:0000411,1.00e-11,10;UBERON:0001950,1.00e-11,10;UBERON:0003076,1.61e-08,12;UBERON:0003057,1.61e-08,12;UBERON:0002420,4.16e-07,8;UBERON:0007245,4.16e-07,8;UBERON:0010009,4.16e-07,8;UBERON:0010011,4.16e-07,8;UBERON:0000454,4.16e-07,8|phase1_expression=0,0.348975407639361,0,0,0,0.839396359559449,1.16806320297763,0,0,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,7.39876624314307,0,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0,0,0,16.589949790487,26.4495489636016,20.2826049121977,0,0,0,0,0,0,0,280.169332457507,336.299792384241,313.594517374911,10.2834354385369,11.4851641294839,136.822222723104,108.305382250607,199.470476694375,5.50579404996943,12.896421146604,13.6709814598057,7.91317726381163,7.77644970620482,10.939180781692,13.6799669510677,1.68828783009504,15.4326230254578,13.8475435172624,12.5287079103211,35.975093044283,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0.253359865475099,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,126.774085106,87.3392767412108,0,0,0,0,1.64769703345305,12.3525162761029,26.0104508873629,49.3661069346065,42.9601968314955,4.36354893575076,10.5456820994042,0.101839363850316,0,0,2.10441855886474,0,0,0.180062129805349,0.30140963567143,1.36072998302656,3.07472928683639,9.18276900685342,4.13925393182425,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.869761658834,172.468130347681,0,0,0,0,0.38660238396628,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,8.50918126935297,8.32202974804643,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,8.9969968598106,0,0,0,0,0,1.45668381692989,2.72091201268276,1.32023555829129,1.47650946440386,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,0,0.713475270408282,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0,3.33765543618917,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0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| ||
|EntrezGene=18013 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=Q3TYB2,Q62414 | |||
|association_with_transcript=7bp_to_NM_010895,uc009vai.1_5end | |||
|description=CAGE_peak_1_at_Neurod2_5end | |||
|id=chr11:98190918..98190951,- | |||
|ontology_enrichment_celltype=CL:0000117!3.81e-17!23;CL:0000337!3.81e-17!23;CL:0000540!1.37e-10!33;CL:0000047!1.37e-10!33;CL:0000031!1.37e-10!33;CL:0000404!1.37e-10!33;CL:0000393!1.51e-07!39;CL:0000211!1.51e-07!39;CL:0002609!5.42e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.96e-21,23;CL:0000337,2.96e-21,23;CL:0000540,2.43e-12,33;CL:0000047,2.43e-12,33;CL:0000031,2.43e-12,33;CL:0000404,2.43e-12,33;CL:0000393,2.75e-09,39;CL:0000211,2.75e-09,39;CL:0002319,1.89e-08,43;CL:0002609,1.98e-08,6;CL:0000221,4.30e-08,44;CL:0000133,4.30e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.47e-25!52;UBERON:0005068!2.47e-25!52;UBERON:0006241!2.47e-25!52;UBERON:0007135!2.47e-25!52;UBERON:0000955!8.85e-24!50;UBERON:0006238!8.85e-24!50;UBERON:0002020!1.64e-23!34;UBERON:0002616!3.70e-23!49;UBERON:0001017!5.91e-22!73;UBERON:0005743!5.91e-22!73;UBERON:0000033!1.03e-21!63;UBERON:0000073!8.88e-21!75;UBERON:0001016!8.88e-21!75;UBERON:0002791!6.44e-20!29;UBERON:0003528!6.44e-20!29;UBERON:0001893!6.44e-20!29;UBERON:0003056!1.19e-19!49;UBERON:0002346!1.88e-19!71;UBERON:0003075!1.88e-19!71;UBERON:0007284!1.88e-19!71;UBERON:0003080!5.74e-19!40;UBERON:0002780!1.17e-18!39;UBERON:0001890!1.17e-18!39;UBERON:0006240!1.17e-18!39;UBERON:0000956!3.52e-15!21;UBERON:0001869!3.52e-15!21;UBERON:0000203!3.52e-15!21;UBERON:0004121!8.62e-15!102;UBERON:0000924!8.62e-15!102;UBERON:0006601!8.62e-15!102;UBERON:0007811!8.09e-13!86;UBERON:0002619!1.27e-11!17;UBERON:0000153!1.16e-10!94;UBERON:0002021!1.32e-09!10;UBERON:0000411!1.32e-09!10;UBERON:0001950!1.32e-09!10;UBERON:0003076!6.35e-07!12;UBERON:0003057!6.35e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.57e-30,34;UBERON:0000073,5.59e-29,54;UBERON:0001049,4.10e-27,52;UBERON:0005068,4.10e-27,52;UBERON:0006241,4.10e-27,52;UBERON:0007135,4.10e-27,52;UBERON:0003528,3.45e-25,29;UBERON:0002791,3.45e-25,29;UBERON:0001893,3.45e-25,29;UBERON:0002346,9.90e-25,64;UBERON:0003075,9.90e-25,64;UBERON:0007284,9.90e-25,64;UBERON:0001017,1.27e-23,73;UBERON:0000955,5.76e-23,47;UBERON:0006238,5.76e-23,47;UBERON:0001016,1.51e-22,75;UBERON:0002616,3.18e-22,46;UBERON:0010371,9.60e-20,73;UBERON:0000956,3.40e-19,21;UBERON:0001869,3.40e-19,21;UBERON:0000203,3.40e-19,21;UBERON:0003080,3.92e-19,40;UBERON:0003056,8.38e-19,49;UBERON:0002780,9.81e-19,39;UBERON:0001890,9.81e-19,39;UBERON:0006240,9.81e-19,39;UBERON:0004121,2.00e-18,95;UBERON:0000924,2.00e-18,95;UBERON:0006601,2.00e-18,95;UBERON:0002619,1.12e-14,17;UBERON:0010314,1.37e-12,92;UBERON:0002021,1.00e-11,10;UBERON:0000411,1.00e-11,10;UBERON:0001950,1.00e-11,10;UBERON:0003076,1.61e-08,12;UBERON:0003057,1.61e-08,12;UBERON:0002420,4.16e-07,8;UBERON:0007245,4.16e-07,8;UBERON:0010009,4.16e-07,8;UBERON:0010011,4.16e-07,8;UBERON:0000454,4.16e-07,8 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.839396359559449,1.16806320297763,0,0,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,7.39876624314307,0,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0,0,0,16.589949790487,26.4495489636016,20.2826049121977,0,0,0,0,0,0,0,280.169332457507,336.299792384241,313.594517374911,10.2834354385369,11.4851641294839,136.822222723104,108.305382250607,199.470476694375,5.50579404996943,12.896421146604,13.6709814598057,7.91317726381163,7.77644970620482,10.939180781692,13.6799669510677,1.68828783009504,15.4326230254578,13.8475435172624,12.5287079103211,35.975093044283,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0.253359865475099,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,126.774085106,87.3392767412108,0,0,0,0,1.64769703345305,12.3525162761029,26.0104508873629,49.3661069346065,42.9601968314955,4.36354893575076,10.5456820994042,0.101839363850316,0,0,2.10441855886474,0,0,0.180062129805349,0.30140963567143,1.36072998302656,3.07472928683639,9.18276900685342,4.13925393182425,0.215567992932842,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,115.869761658834,172.468130347681,0,0,0,0,0.38660238396628,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,8.50918126935297,8.32202974804643,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,8.9969968598106,0,0,0,0,0,1.45668381692989,2.72091201268276,1.32023555829129,1.47650946440386,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,0,0.713475270408282,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0,3.33765543618917,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.0292284845163,60.3026059824402,76.7679988008791,63.9293838318518,55.491684101422,67.2300568676833,51.9767325178491,69.7997864997542,57.0959435320098,69.3798817747439,0.103787347584177,5.58634822761443,8.36594668195257,9.23805524859517,13.4152424081909,10.2952364732008,8.22312892865976,10.3017528619447,8.3438994493872,7.83361356467772,8.61829619626815,10.9403278003924,6.74218853783153,8.70742072706222,7.52404643318534,7.62069906052918,7.18482820858104,9.06673336179414,9.47797571847605,8.53753736779504,6.85738504770831,8.5188386956482,6.91464950847231,7.1219744149841,6.11710972699649,6.68455402344244,5.85369513192872,6.57674278594607,7.33342214767654,12.3451299764702,8.18581625056802,9.65343927280522,6.13846564754534,6.50734732981057,6.75173138433995,29.4776481966776,7.01794825336225,6.44613162144895,0.765153328275374,0.220591419119515,0 | |||
|short_description=p1@Neurod2 | |||
}} |
Revision as of 21:47, 12 September 2013
Short description: | p1@Neurod2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Neurod2_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 7bp_to_NM_010895, uc009vai.1_5end |
EntrezGene: | Neurod2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.96e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.96e-21 | 23 |
neuron | 2.43e-12 | 33 |
neuronal stem cell | 2.43e-12 | 33 |
neuroblast | 2.43e-12 | 33 |
electrically signaling cell | 2.43e-12 | 33 |
electrically responsive cell | 2.75e-09 | 39 |
electrically active cell | 2.75e-09 | 39 |
neural cell | 1.89e-08 | 43 |
neuron of cerebral cortex | 1.98e-08 | 6 |
ectodermal cell | 4.30e-08 | 44 |
neurectodermal cell | 4.30e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.