FFCP PHASE1:Mm9::chr15:84155210..84155241,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=64099|HGNC=|MCL_coexpression_id=522|UniProt=|association_with_transcript=0bp_to_ENSMUST00000145809_5end|description=CAGE_peak_2_at_Parvg_5end|id=chr15:84155210..84155241,+|ontology_enrichment_celltype=CL:0000988!1.54e-11!32;CL:0002032!1.54e-11!32;CL:0000037!1.54e-11!32;CL:0000566!1.54e-11!32;CL:0000837!1.54e-11!32;CL:0002031!2.52e-08!25;CL:0000738!6.40e-08!17;CL:0002087!6.40e-08!17;CL:0000838!1.81e-07!12;CL:0000084!5.51e-07!11;CL:0000827!5.51e-07!11;CL:0000542!6.21e-07!13;CL:0000051!6.21e-07!13;CL:0002320!9.73e-07!46;CL:0000134!9.73e-07!46|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-18,32;CL:0002032,1.80e-18,32;CL:0000037,1.80e-18,32;CL:0000837,1.80e-18,32;CL:0002031,1.74e-13,25;CL:0002320,2.43e-13,46;CL:0000134,2.43e-13,46;CL:0000838,4.37e-11,12;CL:0000738,1.17e-10,17;CL:0002087,1.17e-10,17;CL:0000084,2.60e-10,11;CL:0000827,2.60e-10,11;CL:0000542,6.13e-10,13;CL:0000051,6.13e-10,13;CL:0000219,6.47e-10,54;CL:0000049,9.26e-10,19;CL:0000791,3.65e-08,9;CL:0000789,3.65e-08,9;CL:0002420,3.65e-08,9;CL:0002419,3.65e-08,9;CL:0000790,3.65e-08,9;CL:0000624,2.39e-07,8;CL:0000763,4.31e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.10e-20!48;UBERON:0002405!3.12e-19!70;UBERON:0002390!1.27e-18!45;UBERON:0003061!1.27e-18!45;UBERON:0004177!5.57e-11!29;UBERON:0005057!1.95e-10!51;UBERON:0003408!1.08e-08!24;UBERON:0002371!1.63e-08!16;UBERON:0002370!1.87e-08!23;UBERON:0000974!1.87e-08!23;UBERON:0004807!1.87e-08!23;UBERON:0005058!1.87e-08!23;UBERON:0003351!1.87e-08!23;UBERON:0009113!1.87e-08!23;UBERON:0003295!1.87e-08!23;UBERON:0009722!1.87e-08!23;UBERON:0005562!1.87e-08!23;UBERON:0007690!1.87e-08!23;UBERON:0003081!2.40e-08!88;UBERON:0001474!1.05e-07!22;UBERON:0004765!1.05e-07!22;UBERON:0001434!1.05e-07!22;UBERON:0006562!1.35e-07!24;UBERON:0001557!1.35e-07!24;UBERON:0001042!1.35e-07!24;UBERON:0008814!1.35e-07!24;UBERON:0009145!1.35e-07!24;UBERON:0001004!6.66e-07!42;UBERON:0002384!9.73e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.62e-33,48;UBERON:0002405,9.62e-33,48;UBERON:0002390,2.60e-30,45;UBERON:0003061,2.60e-30,45;UBERON:0004177,9.26e-19,29;UBERON:0005057,9.26e-19,29;UBERON:0000077,5.34e-15,35;UBERON:0003408,5.41e-15,24;UBERON:0002370,1.28e-14,23;UBERON:0000974,1.28e-14,23;UBERON:0004807,1.28e-14,23;UBERON:0005058,1.28e-14,23;UBERON:0003351,1.28e-14,23;UBERON:0009113,1.28e-14,23;UBERON:0003295,1.28e-14,23;UBERON:0009722,1.28e-14,23;UBERON:0005562,1.28e-14,23;UBERON:0007690,1.28e-14,23;UBERON:0006562,1.02e-13,24;UBERON:0001557,1.02e-13,24;UBERON:0001042,1.02e-13,24;UBERON:0008814,1.02e-13,24;UBERON:0009145,1.02e-13,24;UBERON:0002384,2.43e-13,46;UBERON:0003081,1.37e-12,87;UBERON:0001474,6.93e-12,22;UBERON:0004765,6.93e-12,22;UBERON:0001434,6.93e-12,22;UBERON:0002371,8.27e-12,16;UBERON:0000072,1.97e-11,27;UBERON:0001041,1.10e-10,80;UBERON:0002204,4.26e-10,32;UBERON:0001004,4.77e-10,42;UBERON:0000065,1.13e-09,41;UBERON:0000926,6.30e-09,120;UBERON:0004120,6.30e-09,120;UBERON:0006603,6.30e-09,120;UBERON:0003929,9.44e-09,55;UBERON:0005911,1.53e-08,69;UBERON:0000490,2.23e-08,66;UBERON:0002368,7.53e-08,60;UBERON:0007811,1.03e-07,36;UBERON:0002530,4.00e-07,65|phase1_expression=0,0,0,0,0,0,0,14.5909355488981,5.06839399746,4.91535505276186,17.635450727227,10.6096971463797,12.3264525550468,14.3369459967156,3.66420737997229,4.656931149966,5.59649502502517,19.7163853348899,16.0423887318714,17.8243653755173,1.02051948181284,40.0142533339568,45.1875635210358,5.11975752938901,6.19405058881359,0,0,0,0,0.756090389279792,0,0,0,0,0,0,0,51.4793905806397,29.6907430919044,53.3994218853274,48.2349820185432,47.1301384621327,55.8336905985827,0,0,0,0,0,0,0,0.139986421625363,0,13.7581736967344,5.80289713609076,14.7881271622684,0,0,0.515672092277442,0.202316460859598,0,0,0,0,7.64914759689189,7.9109309005358,15.6305625288142,5.09320187881288,4.2264013585371,0,0.135005938331691,0.210324961351382,1.14260393761521,0.662605622854841,0.122490799214954,0.479227355091182,0,0,0.383062014255563,1.0752457327937,0.395658863190582,0.274462930807229,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.142371680799103,0.372798891650601,0.227178579999552,0,0.289864488701678,0.860423876981386,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0.91347103775248,14.2415836005944,1.03909497345377,0.173485326766136,0.304465478312141,0.691846491768175,0.150722640552623,0,0.125666591329675,0.247194967734374,0.144599356919912,3.5384422077995,1.13236794963186,3.09178125844551,3.39412677194655,0,0,0.209446706813455,0.255457055208591,32.1104533675866,18.5969846607956,30.3697842704625,0.149790639404823,0,0.125654352112864,0.347648640384553,1.27857728665165,0.20778804455956,0.162241263067758,0.101839363850316,5.10068579501381,0.252722758433675,0,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.1990342668184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| ||
|EntrezGene=64099 | |||
|HGNC= | |||
|MCL_coexpression_id=522 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000145809_5end | |||
|description=CAGE_peak_2_at_Parvg_5end | |||
|id=chr15:84155210..84155241,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.54e-11!32;CL:0002032!1.54e-11!32;CL:0000037!1.54e-11!32;CL:0000566!1.54e-11!32;CL:0000837!1.54e-11!32;CL:0002031!2.52e-08!25;CL:0000738!6.40e-08!17;CL:0002087!6.40e-08!17;CL:0000838!1.81e-07!12;CL:0000084!5.51e-07!11;CL:0000827!5.51e-07!11;CL:0000542!6.21e-07!13;CL:0000051!6.21e-07!13;CL:0002320!9.73e-07!46;CL:0000134!9.73e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-18,32;CL:0002032,1.80e-18,32;CL:0000037,1.80e-18,32;CL:0000837,1.80e-18,32;CL:0002031,1.74e-13,25;CL:0002320,2.43e-13,46;CL:0000134,2.43e-13,46;CL:0000838,4.37e-11,12;CL:0000738,1.17e-10,17;CL:0002087,1.17e-10,17;CL:0000084,2.60e-10,11;CL:0000827,2.60e-10,11;CL:0000542,6.13e-10,13;CL:0000051,6.13e-10,13;CL:0000219,6.47e-10,54;CL:0000049,9.26e-10,19;CL:0000791,3.65e-08,9;CL:0000789,3.65e-08,9;CL:0002420,3.65e-08,9;CL:0002419,3.65e-08,9;CL:0000790,3.65e-08,9;CL:0000624,2.39e-07,8;CL:0000763,4.31e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.10e-20!48;UBERON:0002405!3.12e-19!70;UBERON:0002390!1.27e-18!45;UBERON:0003061!1.27e-18!45;UBERON:0004177!5.57e-11!29;UBERON:0005057!1.95e-10!51;UBERON:0003408!1.08e-08!24;UBERON:0002371!1.63e-08!16;UBERON:0002370!1.87e-08!23;UBERON:0000974!1.87e-08!23;UBERON:0004807!1.87e-08!23;UBERON:0005058!1.87e-08!23;UBERON:0003351!1.87e-08!23;UBERON:0009113!1.87e-08!23;UBERON:0003295!1.87e-08!23;UBERON:0009722!1.87e-08!23;UBERON:0005562!1.87e-08!23;UBERON:0007690!1.87e-08!23;UBERON:0003081!2.40e-08!88;UBERON:0001474!1.05e-07!22;UBERON:0004765!1.05e-07!22;UBERON:0001434!1.05e-07!22;UBERON:0006562!1.35e-07!24;UBERON:0001557!1.35e-07!24;UBERON:0001042!1.35e-07!24;UBERON:0008814!1.35e-07!24;UBERON:0009145!1.35e-07!24;UBERON:0001004!6.66e-07!42;UBERON:0002384!9.73e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.62e-33,48;UBERON:0002405,9.62e-33,48;UBERON:0002390,2.60e-30,45;UBERON:0003061,2.60e-30,45;UBERON:0004177,9.26e-19,29;UBERON:0005057,9.26e-19,29;UBERON:0000077,5.34e-15,35;UBERON:0003408,5.41e-15,24;UBERON:0002370,1.28e-14,23;UBERON:0000974,1.28e-14,23;UBERON:0004807,1.28e-14,23;UBERON:0005058,1.28e-14,23;UBERON:0003351,1.28e-14,23;UBERON:0009113,1.28e-14,23;UBERON:0003295,1.28e-14,23;UBERON:0009722,1.28e-14,23;UBERON:0005562,1.28e-14,23;UBERON:0007690,1.28e-14,23;UBERON:0006562,1.02e-13,24;UBERON:0001557,1.02e-13,24;UBERON:0001042,1.02e-13,24;UBERON:0008814,1.02e-13,24;UBERON:0009145,1.02e-13,24;UBERON:0002384,2.43e-13,46;UBERON:0003081,1.37e-12,87;UBERON:0001474,6.93e-12,22;UBERON:0004765,6.93e-12,22;UBERON:0001434,6.93e-12,22;UBERON:0002371,8.27e-12,16;UBERON:0000072,1.97e-11,27;UBERON:0001041,1.10e-10,80;UBERON:0002204,4.26e-10,32;UBERON:0001004,4.77e-10,42;UBERON:0000065,1.13e-09,41;UBERON:0000926,6.30e-09,120;UBERON:0004120,6.30e-09,120;UBERON:0006603,6.30e-09,120;UBERON:0003929,9.44e-09,55;UBERON:0005911,1.53e-08,69;UBERON:0000490,2.23e-08,66;UBERON:0002368,7.53e-08,60;UBERON:0007811,1.03e-07,36;UBERON:0002530,4.00e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,14.5909355488981,5.06839399746,4.91535505276186,17.635450727227,10.6096971463797,12.3264525550468,14.3369459967156,3.66420737997229,4.656931149966,5.59649502502517,19.7163853348899,16.0423887318714,17.8243653755173,1.02051948181284,40.0142533339568,45.1875635210358,5.11975752938901,6.19405058881359,0,0,0,0,0.756090389279792,0,0,0,0,0,0,0,51.4793905806397,29.6907430919044,53.3994218853274,48.2349820185432,47.1301384621327,55.8336905985827,0,0,0,0,0,0,0,0.139986421625363,0,13.7581736967344,5.80289713609076,14.7881271622684,0,0,0.515672092277442,0.202316460859598,0,0,0,0,7.64914759689189,7.9109309005358,15.6305625288142,5.09320187881288,4.2264013585371,0,0.135005938331691,0.210324961351382,1.14260393761521,0.662605622854841,0.122490799214954,0.479227355091182,0,0,0.383062014255563,1.0752457327937,0.395658863190582,0.274462930807229,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.142371680799103,0.372798891650601,0.227178579999552,0,0.289864488701678,0.860423876981386,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0.91347103775248,14.2415836005944,1.03909497345377,0.173485326766136,0.304465478312141,0.691846491768175,0.150722640552623,0,0.125666591329675,0.247194967734374,0.144599356919912,3.5384422077995,1.13236794963186,3.09178125844551,3.39412677194655,0,0,0.209446706813455,0.255457055208591,32.1104533675866,18.5969846607956,30.3697842704625,0.149790639404823,0,0.125654352112864,0.347648640384553,1.27857728665165,0.20778804455956,0.162241263067758,0.101839363850316,5.10068579501381,0.252722758433675,0,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.384341160854549,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,17.5553296828309,24.7053990830127,32.110475431702,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,0,0.402619256281115,0.210289948564127,0.102904612379284,0.991256348951394,0,0.213288250535234,0.464473343720877,0.644337306610467,0.80673409849337,0.889512175379481,0.380451252225118,0,0.329397909448022,0,0,0.779856348476481,1.79763881730844,0.216138049874694,0.398282546508734,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.31399745568275,0.370191491765402,0,1.66845105716094,1.57247196090562,1.57403478669398,1.82574109249653,3.85883455603867,4.32863948028414,4.02774592431135,3.56697498905078,2.19649130550465,1.43768206527355,3.34926852901653,0.936113019343682,0.252578877947112,0.179397413521912,0.964887042726734,2.03228509183265,0.568474235311454,0.162964976442026,0,0.234690248288502,0.837531287209079,0.714130922658041,1.17080188714679,1.10344600874334,0.664394068946325,0.797273843287435,1.14704320301017,2.24490476425664,2.74833211304872,3.01582567878545,0.54390568381871,0.491764273019036,0.551873492609465,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0,1.03371317267288,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.709360934569094,0,0,0.913394847343798,0.469343416127421,0.21183207086382,0,0.32977250588296,0,0.120625849856312,0.238744688006273,0,0.291480836629851,0.370850604021019,8.20180227829693,3.50857675537478,4.8150577116125,7.91147519419702,6.42462870288818,10.9813523139131,31.1060526888755,34.8479116285908,33.7207936082794,0,0,0.203319467126849,0.324016022465404,0,0,0.134864346384821,0.165306911450672,0,0.388844919875379,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.337912250981556,0.234714477291508,0,0,0,0,8.21628913633263,15.4071163620525,16.639175060702,17.4093902790245,15.2172691317359,15.6958270277199,17.9091219784754,15.2120212989815,15.044001042274,14.860327297725,13.1074040677893,10.622909000633,14.7204117709704,15.0771203814224,0,0,0,0,0,2.064507229963,0,1.07184189539533,0.501572104035363,0,0,0,0.343706364687375,2.05524755931193,0,0,0.45032120322422,0.906284817968409,0,0,0.399024873401031,0.512200817262403,0.243106717068294,1.04806581313991,0.183843508450014,1.11123363900808,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0,0.561849044819294,0.640251524048693,0.631790158511746,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.735994600671987,0,0.70990322463735,0.715308569841963,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,1.35034627686799,0,0.701794825336225,0.859484216193193,0.191288332068843,1.10295709559758,2.55054619182464 | |||
|short_description=p2@Parvg | |||
}} |
Revision as of 11:26, 13 September 2013
Short description: | p2@Parvg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Parvg_5end |
Coexpression cluster: | MCL_coexpression_mm9:522 |
Association with transcript: | 0bp_to_ENSMUST00000145809_5end |
EntrezGene: | Parvg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.80e-18 | 32 |
hematopoietic oligopotent progenitor cell | 1.80e-18 | 32 |
hematopoietic stem cell | 1.80e-18 | 32 |
hematopoietic multipotent progenitor cell | 1.80e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 1.74e-13 | 25 |
connective tissue cell | 2.43e-13 | 46 |
mesenchymal cell | 2.43e-13 | 46 |
lymphoid lineage restricted progenitor cell | 4.37e-11 | 12 |
leukocyte | 1.17e-10 | 17 |
nongranular leukocyte | 1.17e-10 | 17 |
T cell | 2.60e-10 | 11 |
pro-T cell | 2.60e-10 | 11 |
lymphocyte | 6.13e-10 | 13 |
common lymphoid progenitor | 6.13e-10 | 13 |
motile cell | 6.47e-10 | 54 |
common myeloid progenitor | 9.26e-10 | 19 |
mature alpha-beta T cell | 3.65e-08 | 9 |
alpha-beta T cell | 3.65e-08 | 9 |
immature T cell | 3.65e-08 | 9 |
mature T cell | 3.65e-08 | 9 |
immature alpha-beta T cell | 3.65e-08 | 9 |
CD4-positive, alpha-beta T cell | 2.39e-07 | 8 |
myeloid cell | 4.31e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.