FFCP PHASE1:Mm9::chr17:25854434..25854496,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=64337|HGNC=|MCL_coexpression_id=1|UniProt=Q9JMF3|association_with_transcript=0bp_to_ENSMUST00000115108,uc008bbj.2_5end|description=CAGE_peak_2_at_Gng13_5end|id=chr17:25854434..25854496,+|ontology_enrichment_celltype=CL:0000117!9.06e-11!23;CL:0000337!9.06e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.16e-11,23;CL:0000337,3.16e-11,23;CL:0002614,5.06e-08,3;CL:0002610,1.37e-07,3;CL:0000540,4.55e-07,33;CL:0000047,4.55e-07,33;CL:0000031,4.55e-07,33;CL:0000404,4.55e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.68e-25!73;UBERON:0005743!5.68e-25!73;UBERON:0000073!6.63e-25!75;UBERON:0001016!6.63e-25!75;UBERON:0001049!1.02e-24!52;UBERON:0005068!1.02e-24!52;UBERON:0006241!1.02e-24!52;UBERON:0007135!1.02e-24!52;UBERON:0000955!2.76e-23!50;UBERON:0006238!2.76e-23!50;UBERON:0002616!1.99e-22!49;UBERON:0000033!6.55e-22!63;UBERON:0002020!6.44e-20!34;UBERON:0004121!2.58e-19!102;UBERON:0000924!2.58e-19!102;UBERON:0006601!2.58e-19!102;UBERON:0002346!4.77e-19!71;UBERON:0003075!4.77e-19!71;UBERON:0007284!4.77e-19!71;UBERON:0003056!1.18e-17!49;UBERON:0003080!1.40e-17!40;UBERON:0002780!1.01e-16!39;UBERON:0001890!1.01e-16!39;UBERON:0006240!1.01e-16!39;UBERON:0002791!9.04e-16!29;UBERON:0003528!9.04e-16!29;UBERON:0001893!9.04e-16!29;UBERON:0007811!1.06e-12!86;UBERON:0002021!2.13e-12!10;UBERON:0000411!2.13e-12!10;UBERON:0001950!2.13e-12!10;UBERON:0002619!4.05e-11!17;UBERON:0000153!2.03e-10!94;UBERON:0000956!1.35e-09!21;UBERON:0001869!1.35e-09!21;UBERON:0000203!1.35e-09!21;UBERON:0002420!7.81e-08!8;UBERON:0007245!7.81e-08!8;UBERON:0010009!7.81e-08!8;UBERON:0010011!7.81e-08!8;UBERON:0000454!7.81e-08!8;UBERON:0003076!9.15e-08!12;UBERON:0003057!9.15e-08!12;UBERON:0002298!2.88e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.55e-37,54;UBERON:0001049,8.62e-34,52;UBERON:0005068,8.62e-34,52;UBERON:0006241,8.62e-34,52;UBERON:0007135,8.62e-34,52;UBERON:0001017,1.22e-31,73;UBERON:0001016,1.37e-30,75;UBERON:0002020,9.91e-29,34;UBERON:0002346,4.75e-28,64;UBERON:0003075,4.75e-28,64;UBERON:0007284,4.75e-28,64;UBERON:0000955,6.03e-26,47;UBERON:0006238,6.03e-26,47;UBERON:0002616,1.85e-24,46;UBERON:0002021,3.03e-24,10;UBERON:0000411,3.03e-24,10;UBERON:0001950,3.03e-24,10;UBERON:0004121,4.69e-24,95;UBERON:0000924,4.69e-24,95;UBERON:0006601,4.69e-24,95;UBERON:0010371,1.06e-23,73;UBERON:0003528,8.08e-21,29;UBERON:0002791,8.08e-21,29;UBERON:0001893,8.08e-21,29;UBERON:0003080,1.00e-19,40;UBERON:0002780,2.92e-18,39;UBERON:0001890,2.92e-18,39;UBERON:0006240,2.92e-18,39;UBERON:0010314,2.59e-17,92;UBERON:0003056,8.79e-17,49;UBERON:0002619,4.51e-16,17;UBERON:0003076,1.39e-15,12;UBERON:0003057,1.39e-15,12;UBERON:0000956,5.64e-15,21;UBERON:0001869,5.64e-15,21;UBERON:0000203,5.64e-15,21;UBERON:0002240,8.37e-12,6;UBERON:0005174,8.37e-12,6;UBERON:0001137,8.37e-12,6;UBERON:0000025,1.43e-11,114;UBERON:0004111,2.35e-10,122;UBERON:0001948,6.28e-10,5;UBERON:0002315,6.28e-10,5;UBERON:0002950,7.57e-10,4;UBERON:0001891,7.57e-10,4;UBERON:0009616,7.57e-10,4;UBERON:0010286,7.57e-10,4;UBERON:0002038,5.06e-08,3;UBERON:0009663,5.06e-08,3;UBERON:0009661,5.06e-08,3;UBERON:0000125,5.06e-08,3;UBERON:0002308,5.06e-08,3;UBERON:0004684,1.37e-07,3;UBERON:0002275,1.37e-07,3;UBERON:0011216,4.90e-07,194;UBERON:0002420,5.24e-07,8;UBERON:0007245,5.24e-07,8;UBERON:0010009,5.24e-07,8;UBERON:0010011,5.24e-07,8;UBERON:0000454,5.24e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88850650223665,0,0,0,0.68822784320151,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,6.56997264128748,6.62605622854841,0.244981598429908,0,0,29.731287869835,38.0508267493859,26.2667171868176,0.527545150920775,0.365950574409639,0.52091337055676,45.2276458382237,51.2113975128829,37.8939654486489,3.24091444021034,3.27454865837937,1.3047961207771,0,0.226714680320357,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90508151931177,11.51956887474,0,0,0,0,19.3229924832221,26.5350349634803,1.00523481690292,39.8057693240313,44.2387741181472,23.4800490352303,24.9851545124347,0.101839363850316,0,0,0.841767423545896,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,1.55222022443409,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,30.9126224389267,0.823236899034275,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3899249284496,16.0580010631318,0,0,0,0,0,0,0,0,0,0,0,5.78378369559253,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,22.9927374493032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.448549638131936,0.827292452285488,0.388902376688095,0.516639293910924,1.520605129417,0.469428954583016,0.781226309063701,1.04859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0,0,47.4391547798336,49.7151255427751,39.5297904273184,56.8834033557606,74.673994655,71.7624202520215,68.1772725234124,45.9327627288705,61.6273676218518,51.2582708634302,0.103787347584177,0,0,0,0,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0,0.377252682772152,0,0.0640251524048693,0.287177344778066,0,0.231768651889711,0,0.824171801606613,0.147198920134397,0.685738504770831,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0.818462086339379,0,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.463735671240843|short_description=p2@Gng13}} | ||
|EntrezGene=64337 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9JMF3 | |||
|association_with_transcript=0bp_to_ENSMUST00000115108,uc008bbj.2_5end | |||
|description=CAGE_peak_2_at_Gng13_5end | |||
|id=chr17:25854434..25854496,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.06e-11!23;CL:0000337!9.06e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.16e-11,23;CL:0000337,3.16e-11,23;CL:0002614,5.06e-08,3;CL:0002610,1.37e-07,3;CL:0000540,4.55e-07,33;CL:0000047,4.55e-07,33;CL:0000031,4.55e-07,33;CL:0000404,4.55e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.68e-25!73;UBERON:0005743!5.68e-25!73;UBERON:0000073!6.63e-25!75;UBERON:0001016!6.63e-25!75;UBERON:0001049!1.02e-24!52;UBERON:0005068!1.02e-24!52;UBERON:0006241!1.02e-24!52;UBERON:0007135!1.02e-24!52;UBERON:0000955!2.76e-23!50;UBERON:0006238!2.76e-23!50;UBERON:0002616!1.99e-22!49;UBERON:0000033!6.55e-22!63;UBERON:0002020!6.44e-20!34;UBERON:0004121!2.58e-19!102;UBERON:0000924!2.58e-19!102;UBERON:0006601!2.58e-19!102;UBERON:0002346!4.77e-19!71;UBERON:0003075!4.77e-19!71;UBERON:0007284!4.77e-19!71;UBERON:0003056!1.18e-17!49;UBERON:0003080!1.40e-17!40;UBERON:0002780!1.01e-16!39;UBERON:0001890!1.01e-16!39;UBERON:0006240!1.01e-16!39;UBERON:0002791!9.04e-16!29;UBERON:0003528!9.04e-16!29;UBERON:0001893!9.04e-16!29;UBERON:0007811!1.06e-12!86;UBERON:0002021!2.13e-12!10;UBERON:0000411!2.13e-12!10;UBERON:0001950!2.13e-12!10;UBERON:0002619!4.05e-11!17;UBERON:0000153!2.03e-10!94;UBERON:0000956!1.35e-09!21;UBERON:0001869!1.35e-09!21;UBERON:0000203!1.35e-09!21;UBERON:0002420!7.81e-08!8;UBERON:0007245!7.81e-08!8;UBERON:0010009!7.81e-08!8;UBERON:0010011!7.81e-08!8;UBERON:0000454!7.81e-08!8;UBERON:0003076!9.15e-08!12;UBERON:0003057!9.15e-08!12;UBERON:0002298!2.88e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.55e-37,54;UBERON:0001049,8.62e-34,52;UBERON:0005068,8.62e-34,52;UBERON:0006241,8.62e-34,52;UBERON:0007135,8.62e-34,52;UBERON:0001017,1.22e-31,73;UBERON:0001016,1.37e-30,75;UBERON:0002020,9.91e-29,34;UBERON:0002346,4.75e-28,64;UBERON:0003075,4.75e-28,64;UBERON:0007284,4.75e-28,64;UBERON:0000955,6.03e-26,47;UBERON:0006238,6.03e-26,47;UBERON:0002616,1.85e-24,46;UBERON:0002021,3.03e-24,10;UBERON:0000411,3.03e-24,10;UBERON:0001950,3.03e-24,10;UBERON:0004121,4.69e-24,95;UBERON:0000924,4.69e-24,95;UBERON:0006601,4.69e-24,95;UBERON:0010371,1.06e-23,73;UBERON:0003528,8.08e-21,29;UBERON:0002791,8.08e-21,29;UBERON:0001893,8.08e-21,29;UBERON:0003080,1.00e-19,40;UBERON:0002780,2.92e-18,39;UBERON:0001890,2.92e-18,39;UBERON:0006240,2.92e-18,39;UBERON:0010314,2.59e-17,92;UBERON:0003056,8.79e-17,49;UBERON:0002619,4.51e-16,17;UBERON:0003076,1.39e-15,12;UBERON:0003057,1.39e-15,12;UBERON:0000956,5.64e-15,21;UBERON:0001869,5.64e-15,21;UBERON:0000203,5.64e-15,21;UBERON:0002240,8.37e-12,6;UBERON:0005174,8.37e-12,6;UBERON:0001137,8.37e-12,6;UBERON:0000025,1.43e-11,114;UBERON:0004111,2.35e-10,122;UBERON:0001948,6.28e-10,5;UBERON:0002315,6.28e-10,5;UBERON:0002950,7.57e-10,4;UBERON:0001891,7.57e-10,4;UBERON:0009616,7.57e-10,4;UBERON:0010286,7.57e-10,4;UBERON:0002038,5.06e-08,3;UBERON:0009663,5.06e-08,3;UBERON:0009661,5.06e-08,3;UBERON:0000125,5.06e-08,3;UBERON:0002308,5.06e-08,3;UBERON:0004684,1.37e-07,3;UBERON:0002275,1.37e-07,3;UBERON:0011216,4.90e-07,194;UBERON:0002420,5.24e-07,8;UBERON:0007245,5.24e-07,8;UBERON:0010009,5.24e-07,8;UBERON:0010011,5.24e-07,8;UBERON:0000454,5.24e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88850650223665,0,0,0,0.68822784320151,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.709638518536602,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,6.56997264128748,6.62605622854841,0.244981598429908,0,0,29.731287869835,38.0508267493859,26.2667171868176,0.527545150920775,0.365950574409639,0.52091337055676,45.2276458382237,51.2113975128829,37.8939654486489,3.24091444021034,3.27454865837937,1.3047961207771,0,0.226714680320357,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90508151931177,11.51956887474,0,0,0,0,19.3229924832221,26.5350349634803,1.00523481690292,39.8057693240313,44.2387741181472,23.4800490352303,24.9851545124347,0.101839363850316,0,0,0.841767423545896,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,1.55222022443409,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,30.9126224389267,0.823236899034275,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3899249284496,16.0580010631318,0,0,0,0,0,0,0,0,0,0,0,5.78378369559253,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,22.9927374493032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0.448549638131936,0.827292452285488,0.388902376688095,0.516639293910924,1.520605129417,0.469428954583016,0.781226309063701,1.04859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0,0,47.4391547798336,49.7151255427751,39.5297904273184,56.8834033557606,74.673994655,71.7624202520215,68.1772725234124,45.9327627288705,61.6273676218518,51.2582708634302,0.103787347584177,0,0,0,0,0.551530525350042,0.222246727801615,0,0,0.252697211763798,0,0.377252682772152,0,0.0640251524048693,0.287177344778066,0,0.231768651889711,0,0.824171801606613,0.147198920134397,0.685738504770831,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0.818462086339379,0,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.463735671240843 | |||
|short_description=p2@Gng13 | |||
}} |
Revision as of 13:46, 13 September 2013
Short description: | p2@Gng13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gng13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000115108, uc008bbj.2_5end |
EntrezGene: | Gng13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.16e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.16e-11 | 23 |
neuron of the substantia nigra | 5.06e-08 | 3 |
raphe nuclei neuron | 1.37e-07 | 3 |
neuron | 4.55e-07 | 33 |
neuronal stem cell | 4.55e-07 | 33 |
neuroblast | 4.55e-07 | 33 |
electrically signaling cell | 4.55e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.