FFCP PHASE1:Mm9::chr1:136543147..136543164,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20980|HGNC=|MCL_coexpression_id=20|UniProt=P46097,Q9JM87|association_with_transcript=-93bp_to_NM_009307,uc007csi.1,uc007csj.1_5end|description=CAGE_peak_3_at_Syt2_5end|id=chr1:136543147..136543164,+|ontology_enrichment_celltype=CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.22e-14,23;CL:0000337,9.22e-14,23;CL:0002610,9.75e-12,3;CL:0002614,3.27e-11,3;CL:0000540,4.62e-09,33;CL:0000047,4.62e-09,33;CL:0000031,4.62e-09,33;CL:0000404,4.62e-09,33;CL:0002611,4.70e-08,2;CL:0000393,2.12e-07,39;CL:0000211,2.12e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.23e-20!73;UBERON:0005743!2.23e-20!73;UBERON:0000073!1.77e-19!75;UBERON:0001016!1.77e-19!75;UBERON:0001049!2.95e-18!52;UBERON:0005068!2.95e-18!52;UBERON:0006241!2.95e-18!52;UBERON:0007135!2.95e-18!52;UBERON:0002346!1.36e-16!71;UBERON:0003075!1.36e-16!71;UBERON:0007284!1.36e-16!71;UBERON:0002616!1.85e-15!49;UBERON:0000955!5.84e-15!50;UBERON:0006238!5.84e-15!50;UBERON:0004121!3.67e-14!102;UBERON:0000924!3.67e-14!102;UBERON:0006601!3.67e-14!102;UBERON:0000033!8.98e-14!63;UBERON:0002020!6.64e-12!34;UBERON:0003076!5.74e-11!12;UBERON:0003057!5.74e-11!12;UBERON:0003080!9.65e-10!40;UBERON:0002298!5.19e-09!6;UBERON:0002780!6.58e-09!39;UBERON:0001890!6.58e-09!39;UBERON:0006240!6.58e-09!39;UBERON:0002240!1.35e-08!6;UBERON:0005174!1.35e-08!6;UBERON:0001137!1.35e-08!6;UBERON:0003056!2.44e-08!49;UBERON:0007811!4.56e-08!86;UBERON:0002791!1.45e-07!29;UBERON:0003528!1.45e-07!29;UBERON:0001893!1.45e-07!29;UBERON:0002021!1.52e-07!10;UBERON:0000411!1.52e-07!10;UBERON:0001950!1.52e-07!10;UBERON:0001948!2.88e-07!5;UBERON:0002315!2.88e-07!5;UBERON:0000153!3.83e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-36,54;UBERON:0001049,3.19e-31,52;UBERON:0005068,3.19e-31,52;UBERON:0006241,3.19e-31,52;UBERON:0007135,3.19e-31,52;UBERON:0001017,3.04e-28,73;UBERON:0001016,2.22e-27,75;UBERON:0002346,1.29e-24,64;UBERON:0003075,1.29e-24,64;UBERON:0007284,1.29e-24,64;UBERON:0003076,2.96e-23,12;UBERON:0003057,2.96e-23,12;UBERON:0010371,4.41e-21,73;UBERON:0002616,9.09e-21,46;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0000955,2.98e-20,47;UBERON:0006238,2.98e-20,47;UBERON:0002020,3.05e-19,34;UBERON:0010314,7.03e-16,92;UBERON:0002240,1.19e-14,6;UBERON:0005174,1.19e-14,6;UBERON:0001137,1.19e-14,6;UBERON:0002950,1.97e-14,4;UBERON:0001891,1.97e-14,4;UBERON:0009616,1.97e-14,4;UBERON:0010286,1.97e-14,4;UBERON:0003080,1.09e-13,40;UBERON:0000025,5.23e-12,114;UBERON:0002780,5.93e-12,39;UBERON:0001890,5.93e-12,39;UBERON:0006240,5.93e-12,39;UBERON:0003528,7.73e-12,29;UBERON:0002791,7.73e-12,29;UBERON:0001893,7.73e-12,29;UBERON:0004684,9.75e-12,3;UBERON:0002275,9.75e-12,3;UBERON:0001948,2.67e-11,5;UBERON:0002315,2.67e-11,5;UBERON:0002038,3.27e-11,3;UBERON:0009663,3.27e-11,3;UBERON:0009661,3.27e-11,3;UBERON:0000125,3.27e-11,3;UBERON:0002308,3.27e-11,3;UBERON:0002021,5.47e-11,10;UBERON:0000411,5.47e-11,10;UBERON:0001950,5.47e-11,10;UBERON:0004111,6.07e-11,122;UBERON:0003056,1.08e-10,49;UBERON:0004733,2.68e-10,6;UBERON:0004732,2.68e-10,6;UBERON:0002028,2.68e-10,6;UBERON:0007277,2.68e-10,6;UBERON:0001896,1.27e-08,2;UBERON:0002298,1.27e-08,2;UBERON:0005290,1.27e-08,2;UBERON:0010096,1.27e-08,2;UBERON:0002256,4.70e-08,2;UBERON:0011216,6.46e-08,194;UBERON:0002420,3.43e-07,8;UBERON:0007245,3.43e-07,8;UBERON:0010009,3.43e-07,8;UBERON:0010011,3.43e-07,8;UBERON:0000454,3.43e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.42648248532552,6.62605622854841,0,0,0,16.5173821499083,11.3641730895817,17.3575382579555,0,0.0914876436024097,0,22.6138229191119,1.68828783009504,8.70950012327818,3.53554302568401,3.27454865837937,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0,0,17.8596286177044,15.0801628905688,0,0,0,0,9.28701964309901,3.66000482254901,0,1.39059456153821,0.767146371990992,5.81806524766768,3.40706652442291,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.2936002979246,16.7612711826851,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,22.9927374493032,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.71868654031819,0.859265911718438,1.37016503954128,0,0.675022500231806,1.35096360967266,1.35942722695261,2.07104124700728,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0.467863216890817,0,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p3@Syt2}} | ||
|EntrezGene=20980 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=P46097,Q9JM87 | |||
|association_with_transcript=-93bp_to_NM_009307,uc007csi.1,uc007csj.1_5end | |||
|description=CAGE_peak_3_at_Syt2_5end | |||
|id=chr1:136543147..136543164,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.22e-14,23;CL:0000337,9.22e-14,23;CL:0002610,9.75e-12,3;CL:0002614,3.27e-11,3;CL:0000540,4.62e-09,33;CL:0000047,4.62e-09,33;CL:0000031,4.62e-09,33;CL:0000404,4.62e-09,33;CL:0002611,4.70e-08,2;CL:0000393,2.12e-07,39;CL:0000211,2.12e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.23e-20!73;UBERON:0005743!2.23e-20!73;UBERON:0000073!1.77e-19!75;UBERON:0001016!1.77e-19!75;UBERON:0001049!2.95e-18!52;UBERON:0005068!2.95e-18!52;UBERON:0006241!2.95e-18!52;UBERON:0007135!2.95e-18!52;UBERON:0002346!1.36e-16!71;UBERON:0003075!1.36e-16!71;UBERON:0007284!1.36e-16!71;UBERON:0002616!1.85e-15!49;UBERON:0000955!5.84e-15!50;UBERON:0006238!5.84e-15!50;UBERON:0004121!3.67e-14!102;UBERON:0000924!3.67e-14!102;UBERON:0006601!3.67e-14!102;UBERON:0000033!8.98e-14!63;UBERON:0002020!6.64e-12!34;UBERON:0003076!5.74e-11!12;UBERON:0003057!5.74e-11!12;UBERON:0003080!9.65e-10!40;UBERON:0002298!5.19e-09!6;UBERON:0002780!6.58e-09!39;UBERON:0001890!6.58e-09!39;UBERON:0006240!6.58e-09!39;UBERON:0002240!1.35e-08!6;UBERON:0005174!1.35e-08!6;UBERON:0001137!1.35e-08!6;UBERON:0003056!2.44e-08!49;UBERON:0007811!4.56e-08!86;UBERON:0002791!1.45e-07!29;UBERON:0003528!1.45e-07!29;UBERON:0001893!1.45e-07!29;UBERON:0002021!1.52e-07!10;UBERON:0000411!1.52e-07!10;UBERON:0001950!1.52e-07!10;UBERON:0001948!2.88e-07!5;UBERON:0002315!2.88e-07!5;UBERON:0000153!3.83e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-36,54;UBERON:0001049,3.19e-31,52;UBERON:0005068,3.19e-31,52;UBERON:0006241,3.19e-31,52;UBERON:0007135,3.19e-31,52;UBERON:0001017,3.04e-28,73;UBERON:0001016,2.22e-27,75;UBERON:0002346,1.29e-24,64;UBERON:0003075,1.29e-24,64;UBERON:0007284,1.29e-24,64;UBERON:0003076,2.96e-23,12;UBERON:0003057,2.96e-23,12;UBERON:0010371,4.41e-21,73;UBERON:0002616,9.09e-21,46;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0000955,2.98e-20,47;UBERON:0006238,2.98e-20,47;UBERON:0002020,3.05e-19,34;UBERON:0010314,7.03e-16,92;UBERON:0002240,1.19e-14,6;UBERON:0005174,1.19e-14,6;UBERON:0001137,1.19e-14,6;UBERON:0002950,1.97e-14,4;UBERON:0001891,1.97e-14,4;UBERON:0009616,1.97e-14,4;UBERON:0010286,1.97e-14,4;UBERON:0003080,1.09e-13,40;UBERON:0000025,5.23e-12,114;UBERON:0002780,5.93e-12,39;UBERON:0001890,5.93e-12,39;UBERON:0006240,5.93e-12,39;UBERON:0003528,7.73e-12,29;UBERON:0002791,7.73e-12,29;UBERON:0001893,7.73e-12,29;UBERON:0004684,9.75e-12,3;UBERON:0002275,9.75e-12,3;UBERON:0001948,2.67e-11,5;UBERON:0002315,2.67e-11,5;UBERON:0002038,3.27e-11,3;UBERON:0009663,3.27e-11,3;UBERON:0009661,3.27e-11,3;UBERON:0000125,3.27e-11,3;UBERON:0002308,3.27e-11,3;UBERON:0002021,5.47e-11,10;UBERON:0000411,5.47e-11,10;UBERON:0001950,5.47e-11,10;UBERON:0004111,6.07e-11,122;UBERON:0003056,1.08e-10,49;UBERON:0004733,2.68e-10,6;UBERON:0004732,2.68e-10,6;UBERON:0002028,2.68e-10,6;UBERON:0007277,2.68e-10,6;UBERON:0001896,1.27e-08,2;UBERON:0002298,1.27e-08,2;UBERON:0005290,1.27e-08,2;UBERON:0010096,1.27e-08,2;UBERON:0002256,4.70e-08,2;UBERON:0011216,6.46e-08,194;UBERON:0002420,3.43e-07,8;UBERON:0007245,3.43e-07,8;UBERON:0010009,3.43e-07,8;UBERON:0010011,3.43e-07,8;UBERON:0000454,3.43e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.42648248532552,6.62605622854841,0,0,0,16.5173821499083,11.3641730895817,17.3575382579555,0,0.0914876436024097,0,22.6138229191119,1.68828783009504,8.70950012327818,3.53554302568401,3.27454865837937,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0,0,17.8596286177044,15.0801628905688,0,0,0,0,9.28701964309901,3.66000482254901,0,1.39059456153821,0.767146371990992,5.81806524766768,3.40706652442291,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.2936002979246,16.7612711826851,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,22.9927374493032,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.71868654031819,0.859265911718438,1.37016503954128,0,0.675022500231806,1.35096360967266,1.35942722695261,2.07104124700728,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0.467863216890817,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Syt2 | |||
}} |
Revision as of 18:58, 13 September 2013
Short description: | p3@Syt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Syt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -93bp_to_NM_009307, uc007csi.1, uc007csj.1_5end |
EntrezGene: | Syt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.22e-14 | 23 |
neuroblast (sensu Vertebrata) | 9.22e-14 | 23 |
raphe nuclei neuron | 9.75e-12 | 3 |
neuron of the substantia nigra | 3.27e-11 | 3 |
neuron | 4.62e-09 | 33 |
neuronal stem cell | 4.62e-09 | 33 |
neuroblast | 4.62e-09 | 33 |
electrically signaling cell | 4.62e-09 | 33 |
neuron of the dorsal spinal cord | 4.70e-08 | 2 |
electrically responsive cell | 2.12e-07 | 39 |
electrically active cell | 2.12e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.