FFCP PHASE1:Mm9::chr1:160292628..160292642,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11899|HGNC=|MCL_coexpression_id=13|UniProt=G5E8A1,Q3TPU9,Q3UHD7,Q61137|association_with_transcript=157bp_to_ENSMUST00000046110,ENSMUST00000170718,uc007ddr.2,uc007dds.2,uc007ddt.2,uc007ddu.2_5end|description=CAGE_peak_4_at_Astn1_5end|id=chr1:160292628..160292642,+|ontology_enrichment_celltype=CL:0002319!7.97e-23!43;CL:0000221!7.09e-22!44;CL:0000133!7.09e-22!44;CL:0000540!8.93e-21!33;CL:0000047!8.93e-21!33;CL:0000031!8.93e-21!33;CL:0000404!8.93e-21!33;CL:0000117!3.85e-18!23;CL:0000337!3.85e-18!23;CL:0000055!4.76e-17!50;CL:0000393!3.01e-15!39;CL:0000211!3.01e-15!39;CL:0002321!1.27e-07!70;CL:0000220!1.27e-07!70|ontology_enrichment_celltype_v019_2=CL:0000540,2.83e-31,33;CL:0000047,2.83e-31,33;CL:0000031,2.83e-31,33;CL:0000404,2.83e-31,33;CL:0000117,3.70e-28,23;CL:0000337,3.70e-28,23;CL:0002319,1.93e-26,43;CL:0000221,1.37e-25,44;CL:0000133,1.37e-25,44;CL:0000393,6.99e-25,39;CL:0000211,6.99e-25,39;CL:0002321,3.33e-12,70;CL:0002609,8.00e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.72e-41!73;UBERON:0005743!9.72e-41!73;UBERON:0000073!1.05e-40!75;UBERON:0001016!1.05e-40!75;UBERON:0004121!1.17e-32!102;UBERON:0000924!1.17e-32!102;UBERON:0006601!1.17e-32!102;UBERON:0002346!4.96e-30!71;UBERON:0003075!4.96e-30!71;UBERON:0007284!4.96e-30!71;UBERON:0001049!7.39e-29!52;UBERON:0005068!7.39e-29!52;UBERON:0006241!7.39e-29!52;UBERON:0007135!7.39e-29!52;UBERON:0000955!1.06e-26!50;UBERON:0006238!1.06e-26!50;UBERON:0002616!6.61e-26!49;UBERON:0000033!8.08e-26!63;UBERON:0002020!1.69e-24!34;UBERON:0003056!2.38e-23!49;UBERON:0003080!5.58e-21!40;UBERON:0002791!2.98e-20!29;UBERON:0003528!2.98e-20!29;UBERON:0001893!2.98e-20!29;UBERON:0002780!3.24e-20!39;UBERON:0001890!3.24e-20!39;UBERON:0006240!3.24e-20!39;UBERON:0000956!2.17e-14!21;UBERON:0001869!2.17e-14!21;UBERON:0000203!2.17e-14!21;UBERON:0007811!3.15e-13!86;UBERON:0000153!5.47e-12!94;UBERON:0002619!1.40e-11!17;UBERON:0002021!1.47e-08!10;UBERON:0000411!1.47e-08!10;UBERON:0001950!1.47e-08!10;UBERON:0003076!2.72e-08!12;UBERON:0003057!2.72e-08!12;UBERON:0002420!4.77e-07!8;UBERON:0007245!4.77e-07!8;UBERON:0010009!4.77e-07!8;UBERON:0010011!4.77e-07!8;UBERON:0000454!4.77e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.54e-47,73;UBERON:0001016,8.12e-46,75;UBERON:0004121,1.43e-36,95;UBERON:0000924,1.43e-36,95;UBERON:0006601,1.43e-36,95;UBERON:0002020,6.10e-36,34;UBERON:0000073,2.04e-35,54;UBERON:0001049,3.02e-33,52;UBERON:0005068,3.02e-33,52;UBERON:0006241,3.02e-33,52;UBERON:0007135,3.02e-33,52;UBERON:0002346,4.73e-33,64;UBERON:0003075,4.73e-33,64;UBERON:0007284,4.73e-33,64;UBERON:0003528,3.50e-29,29;UBERON:0002791,3.50e-29,29;UBERON:0001893,3.50e-29,29;UBERON:0010371,3.38e-27,73;UBERON:0000955,4.52e-27,47;UBERON:0006238,4.52e-27,47;UBERON:0002616,6.23e-26,46;UBERON:0003080,3.56e-24,40;UBERON:0002780,4.84e-23,39;UBERON:0001890,4.84e-23,39;UBERON:0006240,4.84e-23,39;UBERON:0003056,1.01e-21,49;UBERON:0000956,7.35e-20,21;UBERON:0001869,7.35e-20,21;UBERON:0000203,7.35e-20,21;UBERON:0010314,1.15e-18,92;UBERON:0002619,2.03e-15,17;UBERON:0002021,8.87e-13,10;UBERON:0000411,8.87e-13,10;UBERON:0001950,8.87e-13,10;UBERON:0002420,2.31e-10,8;UBERON:0007245,2.31e-10,8;UBERON:0010009,2.31e-10,8;UBERON:0010011,2.31e-10,8;UBERON:0000454,2.31e-10,8;UBERON:0003076,2.75e-09,12;UBERON:0003057,2.75e-09,12;UBERON:0002240,1.13e-08,6;UBERON:0005174,1.13e-08,6;UBERON:0001137,1.13e-08,6;UBERON:0000025,1.76e-08,114;UBERON:0001948,8.24e-08,5;UBERON:0002315,8.24e-08,5;UBERON:0011216,1.07e-07,194;UBERON:0004111,3.26e-07,122;UBERON:0000369,4.71e-07,5;UBERON:0002435,4.71e-07,5;UBERON:0000204,4.71e-07,5;UBERON:0010082,4.71e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,0.219686182734472,0.194429899074283,0.699932108126813,2.87505128729943,0,0,0,0,0,0,7.08107613008592,11.6378015439847,8.87363964908651,0,0,0,0,0,0.898800331555214,2.30530983192933,4.04389488003063,4.86021377994086,4.41682418837902,7.14127461009509,4.63823935998388,5.26710436624302,3.92966431174769,5.51531271966013,4.40463523997555,4.08599481872601,3.07213066512487,5.93488294785872,4.84884511092771,6.25096044668112,3.90856198601933,8.4414391504752,4.88954392885792,8.2496003932627,10.5355043791336,6.52398060388552,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0.878342391034642,2.09446706813455,0,0,0,0,5.24267237916879,5.94750783664214,3.39266750704734,8.16974304903699,4.09144731728529,4.36354893575076,5.51620294430376,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.720248519221397,1.20563854268572,1.42876648217788,0.896796041993948,1.03071897015702,0.776110112217047,0,0.378212160335639,0.351902248327898,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,4.6263788684108,4.11618449517138,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,3.39913891117389,0,0,1.26203287766503,1.17131623288992,1.93881057959519,0.716906393857656,1.33679204449436,1.98153571552183,1.61924280669958,1.46127928955656,1.18586333383957,5.14114106274891,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.646793418913773,0.857348140126369,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,8.471277639256,6.44455331110048,9.16632821503035,6.70227411140382,4.11049511862385,9.06472676867641,4.72515750162264,3.60256962579376,4.07828168085784,3.62432218226274,0.31136204275253,0.798049746802062,2.21953687480374,1.45864030240976,0.838452650511929,1.10306105070008,1.33348036680969,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,0.754505365544305,0.842773567228942,1.21647789569252,0.516919220600519,0.476293691283074,1.15884325944855,0.964546102318525,0.824171801606613,0.883193520806384,0.342869252385415,0.354951612318675,1.66905332963125,1.45346416632329,0.658765662907314,1.09998990259179,0.548783918618318,0.526139422875686,0.814824683075171,1.68342681497322,1.54225523561426,1.0835493061312,1.22769312950907,0.77468420592983,1.15743966588685,1.74867404556562,0.701794825336225,0.859484216193193,0.57386499620653,0.220591419119515,0.927471342481686|short_description=p4@Astn1}} | ||
|EntrezGene=11899 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=G5E8A1,Q3TPU9,Q3UHD7,Q61137 | |||
|association_with_transcript=157bp_to_ENSMUST00000046110,ENSMUST00000170718,uc007ddr.2,uc007dds.2,uc007ddt.2,uc007ddu.2_5end | |||
|description=CAGE_peak_4_at_Astn1_5end | |||
|id=chr1:160292628..160292642,+ | |||
|ontology_enrichment_celltype=CL:0002319!7.97e-23!43;CL:0000221!7.09e-22!44;CL:0000133!7.09e-22!44;CL:0000540!8.93e-21!33;CL:0000047!8.93e-21!33;CL:0000031!8.93e-21!33;CL:0000404!8.93e-21!33;CL:0000117!3.85e-18!23;CL:0000337!3.85e-18!23;CL:0000055!4.76e-17!50;CL:0000393!3.01e-15!39;CL:0000211!3.01e-15!39;CL:0002321!1.27e-07!70;CL:0000220!1.27e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.83e-31,33;CL:0000047,2.83e-31,33;CL:0000031,2.83e-31,33;CL:0000404,2.83e-31,33;CL:0000117,3.70e-28,23;CL:0000337,3.70e-28,23;CL:0002319,1.93e-26,43;CL:0000221,1.37e-25,44;CL:0000133,1.37e-25,44;CL:0000393,6.99e-25,39;CL:0000211,6.99e-25,39;CL:0002321,3.33e-12,70;CL:0002609,8.00e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.72e-41!73;UBERON:0005743!9.72e-41!73;UBERON:0000073!1.05e-40!75;UBERON:0001016!1.05e-40!75;UBERON:0004121!1.17e-32!102;UBERON:0000924!1.17e-32!102;UBERON:0006601!1.17e-32!102;UBERON:0002346!4.96e-30!71;UBERON:0003075!4.96e-30!71;UBERON:0007284!4.96e-30!71;UBERON:0001049!7.39e-29!52;UBERON:0005068!7.39e-29!52;UBERON:0006241!7.39e-29!52;UBERON:0007135!7.39e-29!52;UBERON:0000955!1.06e-26!50;UBERON:0006238!1.06e-26!50;UBERON:0002616!6.61e-26!49;UBERON:0000033!8.08e-26!63;UBERON:0002020!1.69e-24!34;UBERON:0003056!2.38e-23!49;UBERON:0003080!5.58e-21!40;UBERON:0002791!2.98e-20!29;UBERON:0003528!2.98e-20!29;UBERON:0001893!2.98e-20!29;UBERON:0002780!3.24e-20!39;UBERON:0001890!3.24e-20!39;UBERON:0006240!3.24e-20!39;UBERON:0000956!2.17e-14!21;UBERON:0001869!2.17e-14!21;UBERON:0000203!2.17e-14!21;UBERON:0007811!3.15e-13!86;UBERON:0000153!5.47e-12!94;UBERON:0002619!1.40e-11!17;UBERON:0002021!1.47e-08!10;UBERON:0000411!1.47e-08!10;UBERON:0001950!1.47e-08!10;UBERON:0003076!2.72e-08!12;UBERON:0003057!2.72e-08!12;UBERON:0002420!4.77e-07!8;UBERON:0007245!4.77e-07!8;UBERON:0010009!4.77e-07!8;UBERON:0010011!4.77e-07!8;UBERON:0000454!4.77e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.54e-47,73;UBERON:0001016,8.12e-46,75;UBERON:0004121,1.43e-36,95;UBERON:0000924,1.43e-36,95;UBERON:0006601,1.43e-36,95;UBERON:0002020,6.10e-36,34;UBERON:0000073,2.04e-35,54;UBERON:0001049,3.02e-33,52;UBERON:0005068,3.02e-33,52;UBERON:0006241,3.02e-33,52;UBERON:0007135,3.02e-33,52;UBERON:0002346,4.73e-33,64;UBERON:0003075,4.73e-33,64;UBERON:0007284,4.73e-33,64;UBERON:0003528,3.50e-29,29;UBERON:0002791,3.50e-29,29;UBERON:0001893,3.50e-29,29;UBERON:0010371,3.38e-27,73;UBERON:0000955,4.52e-27,47;UBERON:0006238,4.52e-27,47;UBERON:0002616,6.23e-26,46;UBERON:0003080,3.56e-24,40;UBERON:0002780,4.84e-23,39;UBERON:0001890,4.84e-23,39;UBERON:0006240,4.84e-23,39;UBERON:0003056,1.01e-21,49;UBERON:0000956,7.35e-20,21;UBERON:0001869,7.35e-20,21;UBERON:0000203,7.35e-20,21;UBERON:0010314,1.15e-18,92;UBERON:0002619,2.03e-15,17;UBERON:0002021,8.87e-13,10;UBERON:0000411,8.87e-13,10;UBERON:0001950,8.87e-13,10;UBERON:0002420,2.31e-10,8;UBERON:0007245,2.31e-10,8;UBERON:0010009,2.31e-10,8;UBERON:0010011,2.31e-10,8;UBERON:0000454,2.31e-10,8;UBERON:0003076,2.75e-09,12;UBERON:0003057,2.75e-09,12;UBERON:0002240,1.13e-08,6;UBERON:0005174,1.13e-08,6;UBERON:0001137,1.13e-08,6;UBERON:0000025,1.76e-08,114;UBERON:0001948,8.24e-08,5;UBERON:0002315,8.24e-08,5;UBERON:0011216,1.07e-07,194;UBERON:0004111,3.26e-07,122;UBERON:0000369,4.71e-07,5;UBERON:0002435,4.71e-07,5;UBERON:0000204,4.71e-07,5;UBERON:0010082,4.71e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.09012578190223,0.219686182734472,0.194429899074283,0.699932108126813,2.87505128729943,0,0,0,0,0,0,7.08107613008592,11.6378015439847,8.87363964908651,0,0,0,0,0,0.898800331555214,2.30530983192933,4.04389488003063,4.86021377994086,4.41682418837902,7.14127461009509,4.63823935998388,5.26710436624302,3.92966431174769,5.51531271966013,4.40463523997555,4.08599481872601,3.07213066512487,5.93488294785872,4.84884511092771,6.25096044668112,3.90856198601933,8.4414391504752,4.88954392885792,8.2496003932627,10.5355043791336,6.52398060388552,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0.878342391034642,2.09446706813455,0,0,0,0,5.24267237916879,5.94750783664214,3.39266750704734,8.16974304903699,4.09144731728529,4.36354893575076,5.51620294430376,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.720248519221397,1.20563854268572,1.42876648217788,0.896796041993948,1.03071897015702,0.776110112217047,0,0.378212160335639,0.351902248327898,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,4.6263788684108,4.11618449517138,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,3.39913891117389,0,0,1.26203287766503,1.17131623288992,1.93881057959519,0.716906393857656,1.33679204449436,1.98153571552183,1.61924280669958,1.46127928955656,1.18586333383957,5.14114106274891,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.646793418913773,0.857348140126369,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,8.471277639256,6.44455331110048,9.16632821503035,6.70227411140382,4.11049511862385,9.06472676867641,4.72515750162264,3.60256962579376,4.07828168085784,3.62432218226274,0.31136204275253,0.798049746802062,2.21953687480374,1.45864030240976,0.838452650511929,1.10306105070008,1.33348036680969,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,0.754505365544305,0.842773567228942,1.21647789569252,0.516919220600519,0.476293691283074,1.15884325944855,0.964546102318525,0.824171801606613,0.883193520806384,0.342869252385415,0.354951612318675,1.66905332963125,1.45346416632329,0.658765662907314,1.09998990259179,0.548783918618318,0.526139422875686,0.814824683075171,1.68342681497322,1.54225523561426,1.0835493061312,1.22769312950907,0.77468420592983,1.15743966588685,1.74867404556562,0.701794825336225,0.859484216193193,0.57386499620653,0.220591419119515,0.927471342481686 | |||
|short_description=p4@Astn1 | |||
}} |
Revision as of 19:22, 13 September 2013
Short description: | p4@Astn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Astn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 157bp_to_ENSMUST00000046110, ENSMUST00000170718, uc007ddr.2, uc007dds.2, uc007ddt.2, uc007ddu.2_5end |
EntrezGene: | Astn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.83e-31 | 33 |
neuronal stem cell | 2.83e-31 | 33 |
neuroblast | 2.83e-31 | 33 |
electrically signaling cell | 2.83e-31 | 33 |
CNS neuron (sensu Vertebrata) | 3.70e-28 | 23 |
neuroblast (sensu Vertebrata) | 3.70e-28 | 23 |
neural cell | 1.93e-26 | 43 |
ectodermal cell | 1.37e-25 | 44 |
neurectodermal cell | 1.37e-25 | 44 |
electrically responsive cell | 6.99e-25 | 39 |
electrically active cell | 6.99e-25 | 39 |
embryonic cell | 3.33e-12 | 70 |
neuron of cerebral cortex | 8.00e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.