FFCP PHASE1:Mm9::chr2:102498797..102498826,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20511|HGNC=|MCL_coexpression_id=2|UniProt=P43006|association_with_transcript=0bp_to_ENSMUST00000080210_5end|description=CAGE_peak_4_at_Slc1a2_5end|id=chr2:102498797..102498826,+|ontology_enrichment_celltype=CL:0000117!3.36e-13!23;CL:0000337!3.36e-13!23;CL:0002319!8.93e-13!43;CL:0000221!2.85e-12!44;CL:0000133!2.85e-12!44;CL:0000540!4.21e-10!33;CL:0000047!4.21e-10!33;CL:0000031!4.21e-10!33;CL:0000404!4.21e-10!33;CL:0000055!1.04e-09!50;CL:0000393!1.64e-07!39;CL:0000211!1.64e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.32e-12,23;CL:0000337,3.32e-12,23;CL:0002319,3.56e-10,43;CL:0000221,7.65e-10,44;CL:0000133,7.65e-10,44;CL:0000540,1.04e-08,33;CL:0000047,1.04e-08,33;CL:0000031,1.04e-08,33;CL:0000404,1.04e-08,33;CL:0000393,7.28e-07,39;CL:0000211,7.28e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.41e-32!73;UBERON:0005743!7.41e-32!73;UBERON:0000073!1.36e-31!75;UBERON:0001016!1.36e-31!75;UBERON:0001049!3.62e-27!52;UBERON:0005068!3.62e-27!52;UBERON:0006241!3.62e-27!52;UBERON:0007135!3.62e-27!52;UBERON:0000955!1.53e-25!50;UBERON:0006238!1.53e-25!50;UBERON:0002020!1.86e-25!34;UBERON:0002616!1.38e-24!49;UBERON:0000033!1.34e-21!63;UBERON:0002791!5.61e-21!29;UBERON:0003528!5.61e-21!29;UBERON:0001893!5.61e-21!29;UBERON:0004121!8.79e-21!102;UBERON:0000924!8.79e-21!102;UBERON:0006601!8.79e-21!102;UBERON:0002346!1.26e-19!71;UBERON:0003075!1.26e-19!71;UBERON:0007284!1.26e-19!71;UBERON:0003080!3.84e-18!40;UBERON:0002780!3.00e-17!39;UBERON:0001890!3.00e-17!39;UBERON:0006240!3.00e-17!39;UBERON:0003056!1.09e-15!49;UBERON:0002619!3.59e-15!17;UBERON:0000956!2.44e-14!21;UBERON:0001869!2.44e-14!21;UBERON:0000203!2.44e-14!21;UBERON:0002021!1.92e-12!10;UBERON:0000411!1.92e-12!10;UBERON:0001950!1.92e-12!10;UBERON:0007811!5.83e-12!86;UBERON:0000153!1.86e-10!94;UBERON:0003076!9.58e-10!12;UBERON:0003057!9.58e-10!12;UBERON:0002420!7.38e-08!8;UBERON:0007245!7.38e-08!8;UBERON:0010009!7.38e-08!8;UBERON:0010011!7.38e-08!8;UBERON:0000454!7.38e-08!8;UBERON:0002298!4.25e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.78e-42,54;UBERON:0001017,1.63e-40,73;UBERON:0001016,3.59e-39,75;UBERON:0001049,8.61e-39,52;UBERON:0005068,8.61e-39,52;UBERON:0006241,8.61e-39,52;UBERON:0007135,8.61e-39,52;UBERON:0002020,6.74e-36,34;UBERON:0000955,3.05e-31,47;UBERON:0006238,3.05e-31,47;UBERON:0002346,7.51e-30,64;UBERON:0003075,7.51e-30,64;UBERON:0007284,7.51e-30,64;UBERON:0002616,1.03e-29,46;UBERON:0004121,7.64e-29,95;UBERON:0000924,7.64e-29,95;UBERON:0006601,7.64e-29,95;UBERON:0003528,2.71e-28,29;UBERON:0002791,2.71e-28,29;UBERON:0001893,2.71e-28,29;UBERON:0010371,1.19e-26,73;UBERON:0003080,2.25e-25,40;UBERON:0002780,6.76e-24,39;UBERON:0001890,6.76e-24,39;UBERON:0006240,6.76e-24,39;UBERON:0002619,2.59e-21,17;UBERON:0002021,1.12e-20,10;UBERON:0000411,1.12e-20,10;UBERON:0001950,1.12e-20,10;UBERON:0003056,1.81e-19,49;UBERON:0000956,2.59e-19,21;UBERON:0001869,2.59e-19,21;UBERON:0000203,2.59e-19,21;UBERON:0010314,2.75e-19,92;UBERON:0003076,8.99e-14,12;UBERON:0003057,8.99e-14,12;UBERON:0000025,6.74e-13,114;UBERON:0004111,2.36e-12,122;UBERON:0002240,1.31e-10,6;UBERON:0005174,1.31e-10,6;UBERON:0001137,1.31e-10,6;UBERON:0002420,4.90e-10,8;UBERON:0007245,4.90e-10,8;UBERON:0010009,4.90e-10,8;UBERON:0010011,4.90e-10,8;UBERON:0000454,4.90e-10,8;UBERON:0011216,5.09e-09,194;UBERON:0001948,8.38e-09,5;UBERON:0002315,8.38e-09,5;UBERON:0002950,7.15e-08,4;UBERON:0001891,7.15e-08,4;UBERON:0009616,7.15e-08,4;UBERON:0010286,7.15e-08,4|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,3.07560655828261,3.4997381833371,0.839918529752175,0,0,0,0,0,0,0,2.42779753031517,0.528990979272033,0.633831403506179,0,0,0,0,0,1.19840044207362,3.45796474789399,0,0.135005938331691,0,35.4207220660716,24.0746709637259,0.244981598429908,0.191690942036473,0,86.9915459895171,77.8892762319645,92.0103134204898,1.05509030184155,1.28082701043374,0.52091337055676,51.9280378142569,46.1465340225978,67.0784307740196,20.0347438122094,18.9354335462807,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.88225191044804,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,14.9318206475889,23.458031163107,0,0,0,0,77.741341851103,154.635203752696,1.38219787324151,196.595306137465,188.462292052454,98.2837450766719,134.498007083171,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,203.560670210075,2.57261530948211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,106.12393998193,102.443014081586,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,72.6186175113284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,155.571828386818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,229.853999945146,228.32131730756,219.991877160728,324.630661447226,174.696042541514,193.380837731763,176.180872560501,132.844754951145,130.958156196435,162.05897757832,0.31136204275253,1.59609949360412,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.468207537349412,0.320125762024346,0.114870937911227,0,0.347652977834566,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.0846146078916765,0.365855945745545,0.789209134313529,0.135804113845862,0.561142271657738,0.355905054372522,0.394017929502254,0,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0.57386499620653,1.76473135295612,0.927471342481686|short_description=p4@Slc1a2}} | ||
|EntrezGene=20511 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P43006 | |||
|association_with_transcript=0bp_to_ENSMUST00000080210_5end | |||
|description=CAGE_peak_4_at_Slc1a2_5end | |||
|id=chr2:102498797..102498826,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.36e-13!23;CL:0000337!3.36e-13!23;CL:0002319!8.93e-13!43;CL:0000221!2.85e-12!44;CL:0000133!2.85e-12!44;CL:0000540!4.21e-10!33;CL:0000047!4.21e-10!33;CL:0000031!4.21e-10!33;CL:0000404!4.21e-10!33;CL:0000055!1.04e-09!50;CL:0000393!1.64e-07!39;CL:0000211!1.64e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.32e-12,23;CL:0000337,3.32e-12,23;CL:0002319,3.56e-10,43;CL:0000221,7.65e-10,44;CL:0000133,7.65e-10,44;CL:0000540,1.04e-08,33;CL:0000047,1.04e-08,33;CL:0000031,1.04e-08,33;CL:0000404,1.04e-08,33;CL:0000393,7.28e-07,39;CL:0000211,7.28e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.41e-32!73;UBERON:0005743!7.41e-32!73;UBERON:0000073!1.36e-31!75;UBERON:0001016!1.36e-31!75;UBERON:0001049!3.62e-27!52;UBERON:0005068!3.62e-27!52;UBERON:0006241!3.62e-27!52;UBERON:0007135!3.62e-27!52;UBERON:0000955!1.53e-25!50;UBERON:0006238!1.53e-25!50;UBERON:0002020!1.86e-25!34;UBERON:0002616!1.38e-24!49;UBERON:0000033!1.34e-21!63;UBERON:0002791!5.61e-21!29;UBERON:0003528!5.61e-21!29;UBERON:0001893!5.61e-21!29;UBERON:0004121!8.79e-21!102;UBERON:0000924!8.79e-21!102;UBERON:0006601!8.79e-21!102;UBERON:0002346!1.26e-19!71;UBERON:0003075!1.26e-19!71;UBERON:0007284!1.26e-19!71;UBERON:0003080!3.84e-18!40;UBERON:0002780!3.00e-17!39;UBERON:0001890!3.00e-17!39;UBERON:0006240!3.00e-17!39;UBERON:0003056!1.09e-15!49;UBERON:0002619!3.59e-15!17;UBERON:0000956!2.44e-14!21;UBERON:0001869!2.44e-14!21;UBERON:0000203!2.44e-14!21;UBERON:0002021!1.92e-12!10;UBERON:0000411!1.92e-12!10;UBERON:0001950!1.92e-12!10;UBERON:0007811!5.83e-12!86;UBERON:0000153!1.86e-10!94;UBERON:0003076!9.58e-10!12;UBERON:0003057!9.58e-10!12;UBERON:0002420!7.38e-08!8;UBERON:0007245!7.38e-08!8;UBERON:0010009!7.38e-08!8;UBERON:0010011!7.38e-08!8;UBERON:0000454!7.38e-08!8;UBERON:0002298!4.25e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.78e-42,54;UBERON:0001017,1.63e-40,73;UBERON:0001016,3.59e-39,75;UBERON:0001049,8.61e-39,52;UBERON:0005068,8.61e-39,52;UBERON:0006241,8.61e-39,52;UBERON:0007135,8.61e-39,52;UBERON:0002020,6.74e-36,34;UBERON:0000955,3.05e-31,47;UBERON:0006238,3.05e-31,47;UBERON:0002346,7.51e-30,64;UBERON:0003075,7.51e-30,64;UBERON:0007284,7.51e-30,64;UBERON:0002616,1.03e-29,46;UBERON:0004121,7.64e-29,95;UBERON:0000924,7.64e-29,95;UBERON:0006601,7.64e-29,95;UBERON:0003528,2.71e-28,29;UBERON:0002791,2.71e-28,29;UBERON:0001893,2.71e-28,29;UBERON:0010371,1.19e-26,73;UBERON:0003080,2.25e-25,40;UBERON:0002780,6.76e-24,39;UBERON:0001890,6.76e-24,39;UBERON:0006240,6.76e-24,39;UBERON:0002619,2.59e-21,17;UBERON:0002021,1.12e-20,10;UBERON:0000411,1.12e-20,10;UBERON:0001950,1.12e-20,10;UBERON:0003056,1.81e-19,49;UBERON:0000956,2.59e-19,21;UBERON:0001869,2.59e-19,21;UBERON:0000203,2.59e-19,21;UBERON:0010314,2.75e-19,92;UBERON:0003076,8.99e-14,12;UBERON:0003057,8.99e-14,12;UBERON:0000025,6.74e-13,114;UBERON:0004111,2.36e-12,122;UBERON:0002240,1.31e-10,6;UBERON:0005174,1.31e-10,6;UBERON:0001137,1.31e-10,6;UBERON:0002420,4.90e-10,8;UBERON:0007245,4.90e-10,8;UBERON:0010009,4.90e-10,8;UBERON:0010011,4.90e-10,8;UBERON:0000454,4.90e-10,8;UBERON:0011216,5.09e-09,194;UBERON:0001948,8.38e-09,5;UBERON:0002315,8.38e-09,5;UBERON:0002950,7.15e-08,4;UBERON:0001891,7.15e-08,4;UBERON:0009616,7.15e-08,4;UBERON:0010286,7.15e-08,4 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1142208021779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,3.07560655828261,3.4997381833371,0.839918529752175,0,0,0,0,0,0,0,2.42779753031517,0.528990979272033,0.633831403506179,0,0,0,0,0,1.19840044207362,3.45796474789399,0,0.135005938331691,0,35.4207220660716,24.0746709637259,0.244981598429908,0.191690942036473,0,86.9915459895171,77.8892762319645,92.0103134204898,1.05509030184155,1.28082701043374,0.52091337055676,51.9280378142569,46.1465340225978,67.0784307740196,20.0347438122094,18.9354335462807,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.88225191044804,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,14.9318206475889,23.458031163107,0,0,0,0,77.741341851103,154.635203752696,1.38219787324151,196.595306137465,188.462292052454,98.2837450766719,134.498007083171,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,203.560670210075,2.57261530948211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,106.12393998193,102.443014081586,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,72.6186175113284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,155.571828386818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,229.853999945146,228.32131730756,219.991877160728,324.630661447226,174.696042541514,193.380837731763,176.180872560501,132.844754951145,130.958156196435,162.05897757832,0.31136204275253,1.59609949360412,0.512200817262403,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.468207537349412,0.320125762024346,0.114870937911227,0,0.347652977834566,0.38581844092741,0,0,0,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.0846146078916765,0.365855945745545,0.789209134313529,0.135804113845862,0.561142271657738,0.355905054372522,0.394017929502254,0,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0.57386499620653,1.76473135295612,0.927471342481686 | |||
|short_description=p4@Slc1a2 | |||
}} |
Revision as of 21:26, 13 September 2013
Short description: | p4@Slc1a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc1a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000080210_5end |
EntrezGene: | Slc1a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.32e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.32e-12 | 23 |
neural cell | 3.56e-10 | 43 |
ectodermal cell | 7.65e-10 | 44 |
neurectodermal cell | 7.65e-10 | 44 |
neuron | 1.04e-08 | 33 |
neuronal stem cell | 1.04e-08 | 33 |
neuroblast | 1.04e-08 | 33 |
electrically signaling cell | 1.04e-08 | 33 |
electrically responsive cell | 7.28e-07 | 39 |
electrically active cell | 7.28e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.