FFCP PHASE1:Mm9::chr2:132607155..132607162,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12653|HGNC=|MCL_coexpression_id=278|UniProt=P16014,E9Q957,Q3TY66|association_with_transcript=141bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end|description=CAGE_peak_6_at_Chgb_5end|id=chr2:132607155..132607162,+|ontology_enrichment_celltype=CL:0000117!4.32e-18!23;CL:0000337!4.32e-18!23;CL:0000540!2.52e-15!33;CL:0000047!2.52e-15!33;CL:0000031!2.52e-15!33;CL:0000404!2.52e-15!33;CL:0000393!1.60e-11!39;CL:0000211!1.60e-11!39;CL:0002319!1.27e-09!43;CL:0000221!3.31e-09!44;CL:0000133!3.31e-09!44;CL:0000055!4.12e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-20,23;CL:0000337,9.71e-20,23;CL:0000540,2.01e-12,33;CL:0000047,2.01e-12,33;CL:0000031,2.01e-12,33;CL:0000404,2.01e-12,33;CL:0000393,7.34e-10,39;CL:0000211,7.34e-10,39;CL:0002319,1.46e-08,43;CL:0000221,2.83e-08,44;CL:0000133,2.83e-08,44;CL:0002610,7.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.24e-37!71;UBERON:0003075!1.24e-37!71;UBERON:0007284!1.24e-37!71;UBERON:0001017!5.58e-33!73;UBERON:0005743!5.58e-33!73;UBERON:0004121!6.90e-32!102;UBERON:0000924!6.90e-32!102;UBERON:0006601!6.90e-32!102;UBERON:0000073!1.55e-31!75;UBERON:0001016!1.55e-31!75;UBERON:0001049!3.97e-31!52;UBERON:0005068!3.97e-31!52;UBERON:0006241!3.97e-31!52;UBERON:0007135!3.97e-31!52;UBERON:0000955!1.62e-29!50;UBERON:0006238!1.62e-29!50;UBERON:0002616!1.22e-28!49;UBERON:0000033!2.14e-28!63;UBERON:0003056!3.25e-24!49;UBERON:0002020!8.95e-24!34;UBERON:0003080!1.85e-23!40;UBERON:0002780!1.56e-22!39;UBERON:0001890!1.56e-22!39;UBERON:0006240!1.56e-22!39;UBERON:0002791!2.57e-19!29;UBERON:0003528!2.57e-19!29;UBERON:0001893!2.57e-19!29;UBERON:0007811!5.03e-16!86;UBERON:0000153!3.08e-13!94;UBERON:0000956!6.60e-13!21;UBERON:0001869!6.60e-13!21;UBERON:0000203!6.60e-13!21;UBERON:0002619!4.36e-11!17;UBERON:0002021!1.02e-10!10;UBERON:0000411!1.02e-10!10;UBERON:0001950!1.02e-10!10;UBERON:0003076!5.58e-08!12;UBERON:0003057!5.58e-08!12;UBERON:0002420!1.03e-07!8;UBERON:0007245!1.03e-07!8;UBERON:0010009!1.03e-07!8;UBERON:0010011!1.03e-07!8;UBERON:0000454!1.03e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.84e-39,54;UBERON:0001017,3.87e-36,73;UBERON:0001049,2.02e-35,52;UBERON:0005068,2.02e-35,52;UBERON:0006241,2.02e-35,52;UBERON:0007135,2.02e-35,52;UBERON:0001016,6.53e-35,75;UBERON:0002346,5.66e-29,64;UBERON:0003075,5.66e-29,64;UBERON:0007284,5.66e-29,64;UBERON:0000955,6.05e-28,47;UBERON:0006238,6.05e-28,47;UBERON:0004121,5.16e-27,95;UBERON:0000924,5.16e-27,95;UBERON:0006601,5.16e-27,95;UBERON:0002020,9.36e-27,34;UBERON:0002616,1.36e-26,46;UBERON:0010371,2.71e-24,73;UBERON:0010314,7.01e-24,92;UBERON:0003080,5.22e-22,40;UBERON:0002780,1.30e-20,39;UBERON:0001890,1.30e-20,39;UBERON:0006240,1.30e-20,39;UBERON:0003528,1.78e-19,29;UBERON:0002791,1.78e-19,29;UBERON:0001893,1.78e-19,29;UBERON:0003056,2.18e-18,49;UBERON:0002021,1.23e-15,10;UBERON:0000411,1.23e-15,10;UBERON:0001950,1.23e-15,10;UBERON:0003076,2.77e-14,12;UBERON:0003057,2.77e-14,12;UBERON:0002420,6.49e-13,8;UBERON:0007245,6.49e-13,8;UBERON:0010009,6.49e-13,8;UBERON:0010011,6.49e-13,8;UBERON:0000454,6.49e-13,8;UBERON:0000025,2.00e-11,114;UBERON:0002240,1.11e-10,6;UBERON:0005174,1.11e-10,6;UBERON:0001137,1.11e-10,6;UBERON:0002619,2.89e-10,17;UBERON:0004111,4.01e-10,122;UBERON:0000956,1.38e-09,21;UBERON:0001869,1.38e-09,21;UBERON:0000203,1.38e-09,21;UBERON:0001948,3.06e-09,5;UBERON:0002315,3.06e-09,5;UBERON:0000369,2.85e-08,5;UBERON:0002435,2.85e-08,5;UBERON:0000204,2.85e-08,5;UBERON:0010082,2.85e-08,5;UBERON:0002950,7.77e-08,4;UBERON:0001891,7.77e-08,4;UBERON:0009616,7.77e-08,4;UBERON:0010286,7.77e-08,4;UBERON:0011216,2.02e-07,194;UBERON:0004684,7.93e-07,3;UBERON:0002275,7.93e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,3.70293685490423,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,2.28520787523043,2.87129103237098,0.122490799214954,0.766763768145891,0.919218786610021,6.60695285996332,2.42605942361857,4.76180253094355,1.45074916503213,2.74462930807229,2.08365348222704,4.4669279840221,1.12552522006336,4.43114918552749,5.00868595305235,1.99320353118744,2.42319279572891,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,1.48442139064825,0.346970653532272,1.21786191324856,0.922461989024234,1.05505848386836,1.29347577849275,1.0053327306374,0,0,0,0,0,0,0,4.9772735491963,5.86450779077674,0,0,0,0,3.2953940669061,1.83000241127451,1.13088916901578,3.30266208365325,2.81287003063364,4.1557608911912,3.0825839982874,0,0,0,0.210441855886474,0,0,0,0.452114453507145,0.544291993210623,0.384341160854549,0.843315521037559,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.729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| ||
|EntrezGene=12653 | |||
|HGNC= | |||
|MCL_coexpression_id=278 | |||
|UniProt=P16014,E9Q957,Q3TY66 | |||
|association_with_transcript=141bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end | |||
|description=CAGE_peak_6_at_Chgb_5end | |||
|id=chr2:132607155..132607162,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.32e-18!23;CL:0000337!4.32e-18!23;CL:0000540!2.52e-15!33;CL:0000047!2.52e-15!33;CL:0000031!2.52e-15!33;CL:0000404!2.52e-15!33;CL:0000393!1.60e-11!39;CL:0000211!1.60e-11!39;CL:0002319!1.27e-09!43;CL:0000221!3.31e-09!44;CL:0000133!3.31e-09!44;CL:0000055!4.12e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.71e-20,23;CL:0000337,9.71e-20,23;CL:0000540,2.01e-12,33;CL:0000047,2.01e-12,33;CL:0000031,2.01e-12,33;CL:0000404,2.01e-12,33;CL:0000393,7.34e-10,39;CL:0000211,7.34e-10,39;CL:0002319,1.46e-08,43;CL:0000221,2.83e-08,44;CL:0000133,2.83e-08,44;CL:0002610,7.93e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.24e-37!71;UBERON:0003075!1.24e-37!71;UBERON:0007284!1.24e-37!71;UBERON:0001017!5.58e-33!73;UBERON:0005743!5.58e-33!73;UBERON:0004121!6.90e-32!102;UBERON:0000924!6.90e-32!102;UBERON:0006601!6.90e-32!102;UBERON:0000073!1.55e-31!75;UBERON:0001016!1.55e-31!75;UBERON:0001049!3.97e-31!52;UBERON:0005068!3.97e-31!52;UBERON:0006241!3.97e-31!52;UBERON:0007135!3.97e-31!52;UBERON:0000955!1.62e-29!50;UBERON:0006238!1.62e-29!50;UBERON:0002616!1.22e-28!49;UBERON:0000033!2.14e-28!63;UBERON:0003056!3.25e-24!49;UBERON:0002020!8.95e-24!34;UBERON:0003080!1.85e-23!40;UBERON:0002780!1.56e-22!39;UBERON:0001890!1.56e-22!39;UBERON:0006240!1.56e-22!39;UBERON:0002791!2.57e-19!29;UBERON:0003528!2.57e-19!29;UBERON:0001893!2.57e-19!29;UBERON:0007811!5.03e-16!86;UBERON:0000153!3.08e-13!94;UBERON:0000956!6.60e-13!21;UBERON:0001869!6.60e-13!21;UBERON:0000203!6.60e-13!21;UBERON:0002619!4.36e-11!17;UBERON:0002021!1.02e-10!10;UBERON:0000411!1.02e-10!10;UBERON:0001950!1.02e-10!10;UBERON:0003076!5.58e-08!12;UBERON:0003057!5.58e-08!12;UBERON:0002420!1.03e-07!8;UBERON:0007245!1.03e-07!8;UBERON:0010009!1.03e-07!8;UBERON:0010011!1.03e-07!8;UBERON:0000454!1.03e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.84e-39,54;UBERON:0001017,3.87e-36,73;UBERON:0001049,2.02e-35,52;UBERON:0005068,2.02e-35,52;UBERON:0006241,2.02e-35,52;UBERON:0007135,2.02e-35,52;UBERON:0001016,6.53e-35,75;UBERON:0002346,5.66e-29,64;UBERON:0003075,5.66e-29,64;UBERON:0007284,5.66e-29,64;UBERON:0000955,6.05e-28,47;UBERON:0006238,6.05e-28,47;UBERON:0004121,5.16e-27,95;UBERON:0000924,5.16e-27,95;UBERON:0006601,5.16e-27,95;UBERON:0002020,9.36e-27,34;UBERON:0002616,1.36e-26,46;UBERON:0010371,2.71e-24,73;UBERON:0010314,7.01e-24,92;UBERON:0003080,5.22e-22,40;UBERON:0002780,1.30e-20,39;UBERON:0001890,1.30e-20,39;UBERON:0006240,1.30e-20,39;UBERON:0003528,1.78e-19,29;UBERON:0002791,1.78e-19,29;UBERON:0001893,1.78e-19,29;UBERON:0003056,2.18e-18,49;UBERON:0002021,1.23e-15,10;UBERON:0000411,1.23e-15,10;UBERON:0001950,1.23e-15,10;UBERON:0003076,2.77e-14,12;UBERON:0003057,2.77e-14,12;UBERON:0002420,6.49e-13,8;UBERON:0007245,6.49e-13,8;UBERON:0010009,6.49e-13,8;UBERON:0010011,6.49e-13,8;UBERON:0000454,6.49e-13,8;UBERON:0000025,2.00e-11,114;UBERON:0002240,1.11e-10,6;UBERON:0005174,1.11e-10,6;UBERON:0001137,1.11e-10,6;UBERON:0002619,2.89e-10,17;UBERON:0004111,4.01e-10,122;UBERON:0000956,1.38e-09,21;UBERON:0001869,1.38e-09,21;UBERON:0000203,1.38e-09,21;UBERON:0001948,3.06e-09,5;UBERON:0002315,3.06e-09,5;UBERON:0000369,2.85e-08,5;UBERON:0002435,2.85e-08,5;UBERON:0000204,2.85e-08,5;UBERON:0010082,2.85e-08,5;UBERON:0002950,7.77e-08,4;UBERON:0001891,7.77e-08,4;UBERON:0009616,7.77e-08,4;UBERON:0010286,7.77e-08,4;UBERON:0011216,2.02e-07,194;UBERON:0004684,7.93e-07,3;UBERON:0002275,7.93e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,3.70293685490423,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,2.28520787523043,2.87129103237098,0.122490799214954,0.766763768145891,0.919218786610021,6.60695285996332,2.42605942361857,4.76180253094355,1.45074916503213,2.74462930807229,2.08365348222704,4.4669279840221,1.12552522006336,4.43114918552749,5.00868595305235,1.99320353118744,2.42319279572891,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,1.48442139064825,0.346970653532272,1.21786191324856,0.922461989024234,1.05505848386836,1.29347577849275,1.0053327306374,0,0,0,0,0,0,0,4.9772735491963,5.86450779077674,0,0,0,0,3.2953940669061,1.83000241127451,1.13088916901578,3.30266208365325,2.81287003063364,4.1557608911912,3.0825839982874,0,0,0,0.210441855886474,0,0,0,0.452114453507145,0.544291993210623,0.384341160854549,0.843315521037559,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.7507739709505,0,0,0,0.390438744296638,0.430846795465598,0,0,0,0,0.292255857911312,0.395287777946524,2.24924921495265,0,0,0,0,1.32745138339963,0,0,0,0,0.614870295887855,0,0.727067458955011,0.356497378384721,0,0,0,9.19186935535228,0,0.129358683782755,0,0.354680467284547,0.713475270408282,0.164549020602121,1.2178597964584,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,4.60325236507177,4.01026859407578,3.43706364687375,4.7955776383945,1.5107877947794,0.675022500231806,6.30449684513909,5.89085131679466,6.21312374102184,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0,1.2673964994512,0.377252682772152,0.37456602987953,0.256100609619477,0.114870937911227,0.952587382566147,0.231768651889711,0.578727661391115,0.824171801606613,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.581385666529314,0.376437521661322,0.338458431566706,0.548783918618318,0,0.407412341537585,0,0,0.0985044823755635,0.818462086339379,0.619747364743864,0.578719832943424,0,0,0.644613162144895,0.382576664137687,0,0.231867835620421 | |||
|short_description=p6@Chgb | |||
}} |
Revision as of 22:09, 13 September 2013
Short description: | p6@Chgb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Chgb_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | 141bp_to_ENSMUST00000028826, ENSMUST00000168530, NM_007694, uc008mnf.1_5end |
EntrezGene: | Chgb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.71e-20 | 23 |
neuroblast (sensu Vertebrata) | 9.71e-20 | 23 |
neuron | 2.01e-12 | 33 |
neuronal stem cell | 2.01e-12 | 33 |
neuroblast | 2.01e-12 | 33 |
electrically signaling cell | 2.01e-12 | 33 |
electrically responsive cell | 7.34e-10 | 39 |
electrically active cell | 7.34e-10 | 39 |
neural cell | 1.46e-08 | 43 |
ectodermal cell | 2.83e-08 | 44 |
neurectodermal cell | 2.83e-08 | 44 |
raphe nuclei neuron | 7.93e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.