FFCP PHASE1:Mm9::chr2:31701445..31701472,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=98970|HGNC=|MCL_coexpression_id=223|UniProt=A2AV25|association_with_transcript=52bp_to_ENSMUST00000028188,NM_178887,uc008jee.2_5end|description=CAGE_peak_1_at_Fibcd1_5end|id=chr2:31701445..31701472,-|ontology_enrichment_celltype=CL:0000117!3.12e-16!23;CL:0000337!3.12e-16!23;CL:0000540!1.70e-10!33;CL:0000047!1.70e-10!33;CL:0000031!1.70e-10!33;CL:0000404!1.70e-10!33;CL:0002319!1.36e-07!43;CL:0000393!2.77e-07!39;CL:0000211!2.77e-07!39;CL:0000221!3.51e-07!44;CL:0000133!3.51e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,8.36e-27,23;CL:0000337,8.36e-27,23;CL:0000540,5.96e-17,33;CL:0000047,5.96e-17,33;CL:0000031,5.96e-17,33;CL:0000404,5.96e-17,33;CL:0000393,1.72e-13,39;CL:0000211,1.72e-13,39;CL:0002319,9.84e-12,43;CL:0000221,2.41e-11,44;CL:0000133,2.41e-11,44;CL:0000120,7.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.59e-22!52;UBERON:0005068!9.59e-22!52;UBERON:0006241!9.59e-22!52;UBERON:0007135!9.59e-22!52;UBERON:0002020!3.56e-21!34;UBERON:0001017!3.66e-21!73;UBERON:0005743!3.66e-21!73;UBERON:0000955!1.24e-20!50;UBERON:0006238!1.24e-20!50;UBERON:0000033!5.38e-20!63;UBERON:0000073!6.24e-20!75;UBERON:0001016!6.24e-20!75;UBERON:0002616!8.02e-20!49;UBERON:0002346!1.40e-19!71;UBERON:0003075!1.40e-19!71;UBERON:0007284!1.40e-19!71;UBERON:0003056!1.92e-19!49;UBERON:0003080!2.35e-17!40;UBERON:0002791!2.55e-17!29;UBERON:0003528!2.55e-17!29;UBERON:0001893!2.55e-17!29;UBERON:0002780!1.57e-16!39;UBERON:0001890!1.57e-16!39;UBERON:0006240!1.57e-16!39;UBERON:0004121!2.18e-16!102;UBERON:0000924!2.18e-16!102;UBERON:0006601!2.18e-16!102;UBERON:0007811!4.94e-15!86;UBERON:0000153!7.60e-13!94;UBERON:0000956!8.24e-12!21;UBERON:0001869!8.24e-12!21;UBERON:0000203!8.24e-12!21;UBERON:0002619!9.13e-10!17;UBERON:0002021!2.16e-08!10;UBERON:0000411!2.16e-08!10;UBERON:0001950!2.16e-08!10;UBERON:0002420!8.22e-07!8;UBERON:0007245!8.22e-07!8;UBERON:0010009!8.22e-07!8;UBERON:0010011!8.22e-07!8;UBERON:0000454!8.22e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.04e-37,34;UBERON:0000073,5.94e-37,54;UBERON:0001017,1.11e-32,73;UBERON:0001016,1.60e-31,75;UBERON:0001049,2.34e-31,52;UBERON:0005068,2.34e-31,52;UBERON:0006241,2.34e-31,52;UBERON:0007135,2.34e-31,52;UBERON:0003528,5.90e-29,29;UBERON:0002791,5.90e-29,29;UBERON:0001893,5.90e-29,29;UBERON:0002346,1.37e-28,64;UBERON:0003075,1.37e-28,64;UBERON:0007284,1.37e-28,64;UBERON:0004121,1.09e-26,95;UBERON:0000924,1.09e-26,95;UBERON:0006601,1.09e-26,95;UBERON:0000955,2.07e-26,47;UBERON:0006238,2.07e-26,47;UBERON:0003080,1.41e-25,40;UBERON:0002616,6.62e-25,46;UBERON:0003056,1.98e-24,49;UBERON:0002780,5.65e-24,39;UBERON:0001890,5.65e-24,39;UBERON:0006240,5.65e-24,39;UBERON:0010371,7.48e-24,73;UBERON:0000956,1.44e-17,21;UBERON:0001869,1.44e-17,21;UBERON:0000203,1.44e-17,21;UBERON:0010314,6.44e-17,92;UBERON:0002021,2.62e-16,10;UBERON:0000411,2.62e-16,10;UBERON:0001950,2.62e-16,10;UBERON:0002619,3.35e-15,17;UBERON:0002420,6.55e-13,8;UBERON:0007245,6.55e-13,8;UBERON:0010009,6.55e-13,8;UBERON:0010011,6.55e-13,8;UBERON:0000454,6.55e-13,8;UBERON:0000025,3.21e-10,114;UBERON:0001948,2.64e-09,5;UBERON:0002315,2.64e-09,5;UBERON:0004111,5.66e-09,122;UBERON:0000369,1.29e-08,5;UBERON:0002435,1.29e-08,5;UBERON:0000204,1.29e-08,5;UBERON:0010082,1.29e-08,5;UBERON:0002950,1.13e-07,4;UBERON:0001891,1.13e-07,4;UBERON:0009616,1.13e-07,4;UBERON:0010286,1.13e-07,4;UBERON:0002240,1.17e-07,6;UBERON:0005174,1.17e-07,6;UBERON:0001137,1.17e-07,6|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,8.9019242778223,20.6306481916093,15.2119536841483,0,0,0,0,0,0,0.384218305321555,0.725827286159344,1.08004750665353,1.05162480675691,10.2834354385369,3.97563373712904,0.61245399607477,0.287536413054709,1.83843757322004,9.91042928994498,7.15049093277051,9.21639199537461,4.2203612073662,5.76372154695181,4.68822033501084,7.81712397203867,2.8138130501584,5.65353516774197,12.9636577608414,7.83044244395066,3.16879057903011,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0,0,0,15.8778077769112,10.5225138648284,1.25654352112864,4.17178368461463,4.09144731728529,6.64921742590592,6.00292673350703,0.101839363850316,0.124406970610093,2.52722758433675,0.420883711772948,0.650602214813519,0.229902104433473,0,0.30140963567143,0.272145996605311,1.2811372028485,1.40552586839593,1.03481348295606,0.215567992932842,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.6664046721099,7.20332286654991,0,0.264450566663544,0.426576501070468,0,1.03093969057675,0.605050573870028,0.889512175379481,0.760902504450237,0,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0.456994050438915,0,0,0.581857461502877,0.21040745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| ||
|EntrezGene=98970 | |||
|HGNC= | |||
|MCL_coexpression_id=223 | |||
|UniProt=A2AV25 | |||
|association_with_transcript=52bp_to_ENSMUST00000028188,NM_178887,uc008jee.2_5end | |||
|description=CAGE_peak_1_at_Fibcd1_5end | |||
|id=chr2:31701445..31701472,- | |||
|ontology_enrichment_celltype=CL:0000117!3.12e-16!23;CL:0000337!3.12e-16!23;CL:0000540!1.70e-10!33;CL:0000047!1.70e-10!33;CL:0000031!1.70e-10!33;CL:0000404!1.70e-10!33;CL:0002319!1.36e-07!43;CL:0000393!2.77e-07!39;CL:0000211!2.77e-07!39;CL:0000221!3.51e-07!44;CL:0000133!3.51e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.36e-27,23;CL:0000337,8.36e-27,23;CL:0000540,5.96e-17,33;CL:0000047,5.96e-17,33;CL:0000031,5.96e-17,33;CL:0000404,5.96e-17,33;CL:0000393,1.72e-13,39;CL:0000211,1.72e-13,39;CL:0002319,9.84e-12,43;CL:0000221,2.41e-11,44;CL:0000133,2.41e-11,44;CL:0000120,7.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.59e-22!52;UBERON:0005068!9.59e-22!52;UBERON:0006241!9.59e-22!52;UBERON:0007135!9.59e-22!52;UBERON:0002020!3.56e-21!34;UBERON:0001017!3.66e-21!73;UBERON:0005743!3.66e-21!73;UBERON:0000955!1.24e-20!50;UBERON:0006238!1.24e-20!50;UBERON:0000033!5.38e-20!63;UBERON:0000073!6.24e-20!75;UBERON:0001016!6.24e-20!75;UBERON:0002616!8.02e-20!49;UBERON:0002346!1.40e-19!71;UBERON:0003075!1.40e-19!71;UBERON:0007284!1.40e-19!71;UBERON:0003056!1.92e-19!49;UBERON:0003080!2.35e-17!40;UBERON:0002791!2.55e-17!29;UBERON:0003528!2.55e-17!29;UBERON:0001893!2.55e-17!29;UBERON:0002780!1.57e-16!39;UBERON:0001890!1.57e-16!39;UBERON:0006240!1.57e-16!39;UBERON:0004121!2.18e-16!102;UBERON:0000924!2.18e-16!102;UBERON:0006601!2.18e-16!102;UBERON:0007811!4.94e-15!86;UBERON:0000153!7.60e-13!94;UBERON:0000956!8.24e-12!21;UBERON:0001869!8.24e-12!21;UBERON:0000203!8.24e-12!21;UBERON:0002619!9.13e-10!17;UBERON:0002021!2.16e-08!10;UBERON:0000411!2.16e-08!10;UBERON:0001950!2.16e-08!10;UBERON:0002420!8.22e-07!8;UBERON:0007245!8.22e-07!8;UBERON:0010009!8.22e-07!8;UBERON:0010011!8.22e-07!8;UBERON:0000454!8.22e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.04e-37,34;UBERON:0000073,5.94e-37,54;UBERON:0001017,1.11e-32,73;UBERON:0001016,1.60e-31,75;UBERON:0001049,2.34e-31,52;UBERON:0005068,2.34e-31,52;UBERON:0006241,2.34e-31,52;UBERON:0007135,2.34e-31,52;UBERON:0003528,5.90e-29,29;UBERON:0002791,5.90e-29,29;UBERON:0001893,5.90e-29,29;UBERON:0002346,1.37e-28,64;UBERON:0003075,1.37e-28,64;UBERON:0007284,1.37e-28,64;UBERON:0004121,1.09e-26,95;UBERON:0000924,1.09e-26,95;UBERON:0006601,1.09e-26,95;UBERON:0000955,2.07e-26,47;UBERON:0006238,2.07e-26,47;UBERON:0003080,1.41e-25,40;UBERON:0002616,6.62e-25,46;UBERON:0003056,1.98e-24,49;UBERON:0002780,5.65e-24,39;UBERON:0001890,5.65e-24,39;UBERON:0006240,5.65e-24,39;UBERON:0010371,7.48e-24,73;UBERON:0000956,1.44e-17,21;UBERON:0001869,1.44e-17,21;UBERON:0000203,1.44e-17,21;UBERON:0010314,6.44e-17,92;UBERON:0002021,2.62e-16,10;UBERON:0000411,2.62e-16,10;UBERON:0001950,2.62e-16,10;UBERON:0002619,3.35e-15,17;UBERON:0002420,6.55e-13,8;UBERON:0007245,6.55e-13,8;UBERON:0010009,6.55e-13,8;UBERON:0010011,6.55e-13,8;UBERON:0000454,6.55e-13,8;UBERON:0000025,3.21e-10,114;UBERON:0001948,2.64e-09,5;UBERON:0002315,2.64e-09,5;UBERON:0004111,5.66e-09,122;UBERON:0000369,1.29e-08,5;UBERON:0002435,1.29e-08,5;UBERON:0000204,1.29e-08,5;UBERON:0010082,1.29e-08,5;UBERON:0002950,1.13e-07,4;UBERON:0001891,1.13e-07,4;UBERON:0009616,1.13e-07,4;UBERON:0010286,1.13e-07,4;UBERON:0002240,1.17e-07,6;UBERON:0005174,1.17e-07,6;UBERON:0001137,1.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,8.9019242778223,20.6306481916093,15.2119536841483,0,0,0,0,0,0,0.384218305321555,0.725827286159344,1.08004750665353,1.05162480675691,10.2834354385369,3.97563373712904,0.61245399607477,0.287536413054709,1.83843757322004,9.91042928994498,7.15049093277051,9.21639199537461,4.2203612073662,5.76372154695181,4.68822033501084,7.81712397203867,2.8138130501584,5.65353516774197,12.9636577608414,7.83044244395066,3.16879057903011,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0,0,0,15.8778077769112,10.5225138648284,1.25654352112864,4.17178368461463,4.09144731728529,6.64921742590592,6.00292673350703,0.101839363850316,0.124406970610093,2.52722758433675,0.420883711772948,0.650602214813519,0.229902104433473,0,0.30140963567143,0.272145996605311,1.2811372028485,1.40552586839593,1.03481348295606,0.215567992932842,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.6664046721099,7.20332286654991,0,0.264450566663544,0.426576501070468,0,1.03093969057675,0.605050573870028,0.889512175379481,0.760902504450237,0,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0.456994050438915,0,0,0.581857461502877,0.210407459670956,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,2.0871576698413,2.46144541843627,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0.395287777946524,9.63963949265421,0,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.247960367176008,0,0,0,0.56369293868419,0,0.165458490457098,0.388902376688095,0.516639293910924,0.168956125490778,0,0,0.629156066554265,0.966336483304024,0.576060012515731,0,0.202725215290164,0,0,0,0.198681354781265,0.480781798079875,0.147689527174577,0.302899349844443,0.304827226619999,0.201652370273681,0.194915761479505,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,7.34177395402186,7.82552902062201,6.30185064783336,3.78077001156113,7.53590771747707,9.06472676867641,2.70009000092722,4.5032120322422,4.98456649882625,5.69536342927002,0.207574695168353,1.19707462020309,0.170733605754134,0.972426868273176,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,1.28367683836726,0.252697211763798,1.01391719956096,0.943131706930381,0.187283014939765,0.384150914429216,0.114870937911227,0.476293691283074,1.62238056322798,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0,0.726732083161643,0.846984423737976,0.423073039458382,0.182927972872773,1.05227884575137,0.814824683075171,0,1.06771516311757,0.197008964751127,0.409231043169689,0,0.385813221962283,1.49886346762768,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,0 | |||
|short_description=p1@Fibcd1 | |||
}} |
Revision as of 23:44, 13 September 2013
Short description: | p1@Fibcd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fibcd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:223 |
Association with transcript: | 52bp_to_ENSMUST00000028188, NM_178887, uc008jee.2_5end |
EntrezGene: | Fibcd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.36e-27 | 23 |
neuroblast (sensu Vertebrata) | 8.36e-27 | 23 |
neuron | 5.96e-17 | 33 |
neuronal stem cell | 5.96e-17 | 33 |
neuroblast | 5.96e-17 | 33 |
electrically signaling cell | 5.96e-17 | 33 |
electrically responsive cell | 1.72e-13 | 39 |
electrically active cell | 1.72e-13 | 39 |
neural cell | 9.84e-12 | 43 |
ectodermal cell | 2.41e-11 | 44 |
neurectodermal cell | 2.41e-11 | 44 |
granule cell | 7.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.