FFCP PHASE1:Mm9::chr2:70401686..70401720,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14415|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=-25bp_to_uc008jzm.1_5end|description=CAGE_peak_7_at_Gad1_5end|id=chr2:70401686..70401720,+|ontology_enrichment_celltype=CL:0000117!4.73e-18!23;CL:0000337!4.73e-18!23;CL:0000540!7.80e-12!33;CL:0000047!7.80e-12!33;CL:0000031!7.80e-12!33;CL:0000404!7.80e-12!33;CL:0000221!6.17e-10!44;CL:0000133!6.17e-10!44;CL:0002319!2.62e-09!43;CL:0000393!4.71e-09!39;CL:0000211!4.71e-09!39;CL:0000055!4.06e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.37e-20,23;CL:0000337,3.37e-20,23;CL:0000540,6.67e-13,33;CL:0000047,6.67e-13,33;CL:0000031,6.67e-13,33;CL:0000404,6.67e-13,33;CL:0000393,2.45e-10,39;CL:0000211,2.45e-10,39;CL:0002319,4.94e-09,43;CL:0000221,9.59e-09,44;CL:0000133,9.59e-09,44;CL:0002614,6.16e-08,3;CL:0002610,1.20e-07,3;CL:0002612,5.52e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.05e-26!63;UBERON:0000073!3.23e-26!75;UBERON:0001016!3.23e-26!75;UBERON:0001017!3.60e-26!73;UBERON:0005743!3.60e-26!73;UBERON:0001049!1.06e-24!52;UBERON:0005068!1.06e-24!52;UBERON:0006241!1.06e-24!52;UBERON:0007135!1.06e-24!52;UBERON:0004121!3.97e-23!102;UBERON:0000924!3.97e-23!102;UBERON:0006601!3.97e-23!102;UBERON:0002020!4.25e-23!34;UBERON:0000955!7.11e-23!50;UBERON:0006238!7.11e-23!50;UBERON:0002346!2.39e-22!71;UBERON:0003075!2.39e-22!71;UBERON:0007284!2.39e-22!71;UBERON:0002616!8.63e-22!49;UBERON:0003056!9.19e-19!49;UBERON:0002791!7.89e-18!29;UBERON:0003528!7.89e-18!29;UBERON:0001893!7.89e-18!29;UBERON:0007811!5.57e-16!86;UBERON:0003080!1.70e-15!40;UBERON:0002780!1.95e-14!39;UBERON:0001890!1.95e-14!39;UBERON:0006240!1.95e-14!39;UBERON:0000153!1.58e-13!94;UBERON:0002021!1.50e-11!10;UBERON:0000411!1.50e-11!10;UBERON:0001950!1.50e-11!10;UBERON:0003076!2.38e-10!12;UBERON:0003057!2.38e-10!12;UBERON:0000956!4.86e-10!21;UBERON:0001869!4.86e-10!21;UBERON:0000203!4.86e-10!21;UBERON:0002619!5.97e-10!17;UBERON:0002420!8.06e-10!8;UBERON:0007245!8.06e-10!8;UBERON:0010009!8.06e-10!8;UBERON:0010011!8.06e-10!8;UBERON:0000454!8.06e-10!8;UBERON:0002298!2.79e-09!6;UBERON:0002240!4.94e-08!6;UBERON:0005174!4.94e-08!6;UBERON:0001137!4.94e-08!6;UBERON:0001948!9.24e-07!5;UBERON:0002315!9.24e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.30e-37,54;UBERON:0001017,7.00e-36,73;UBERON:0001016,1.05e-34,75;UBERON:0002346,4.42e-34,64;UBERON:0003075,4.42e-34,64;UBERON:0007284,4.42e-34,64;UBERON:0001049,9.47e-34,52;UBERON:0005068,9.47e-34,52;UBERON:0006241,9.47e-34,52;UBERON:0007135,9.47e-34,52;UBERON:0004121,1.77e-32,95;UBERON:0000924,1.77e-32,95;UBERON:0006601,1.77e-32,95;UBERON:0010371,6.77e-29,73;UBERON:0002020,2.53e-27,34;UBERON:0000955,1.14e-25,47;UBERON:0006238,1.14e-25,47;UBERON:0002616,4.65e-24,46;UBERON:0010314,2.83e-21,92;UBERON:0003056,3.60e-21,49;UBERON:0003528,2.64e-19,29;UBERON:0002791,2.64e-19,29;UBERON:0001893,2.64e-19,29;UBERON:0003080,8.43e-19,40;UBERON:0002780,3.29e-17,39;UBERON:0001890,3.29e-17,39;UBERON:0006240,3.29e-17,39;UBERON:0003076,5.19e-17,12;UBERON:0003057,5.19e-17,12;UBERON:0002021,3.83e-15,10;UBERON:0000411,3.83e-15,10;UBERON:0001950,3.83e-15,10;UBERON:0002240,1.86e-12,6;UBERON:0005174,1.86e-12,6;UBERON:0001137,1.86e-12,6;UBERON:0002420,2.84e-12,8;UBERON:0007245,2.84e-12,8;UBERON:0010009,2.84e-12,8;UBERON:0010011,2.84e-12,8;UBERON:0000454,2.84e-12,8;UBERON:0000025,2.28e-11,114;UBERON:0002619,2.48e-10,17;UBERON:0001948,2.52e-10,5;UBERON:0002315,2.52e-10,5;UBERON:0004111,3.81e-10,122;UBERON:0002950,4.18e-10,4;UBERON:0001891,4.18e-10,4;UBERON:0009616,4.18e-10,4;UBERON:0010286,4.18e-10,4;UBERON:0000956,8.48e-10,21;UBERON:0001869,8.48e-10,21;UBERON:0000203,8.48e-10,21;UBERON:0011216,3.12e-08,194;UBERON:0002038,6.16e-08,3;UBERON:0009663,6.16e-08,3;UBERON:0009661,6.16e-08,3;UBERON:0000125,6.16e-08,3;UBERON:0002308,6.16e-08,3;UBERON:0004684,1.20e-07,3;UBERON:0002275,1.20e-07,3;UBERON:0000483,1.76e-07,174;UBERON:0000119,2.63e-07,176;UBERON:0002257,5.52e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,4.23192783417626,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0,2.85650984403804,1.54607978666129,0.489963196859816,0.383381884072945,0,2.20231761998777,5.87361755191863,11.5204899942183,1.18697658957174,1.00636407962651,0.52091337055676,9.77140496504833,5.06486349028512,4.73674568108111,3.83017161115768,2.98980529678116,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22058876712702,5.44561437714983,0,0,0,0,7.9389038884556,4.57500602818627,1.25654352112864,3.12883776346098,3.3243009452943,8.3115217823824,5.67844420737152,0.101839363850316,0,0,1.68353484709179,0,0,0,0.452114453507145,0.748401490664606,1.0249097622788,1.49922759295566,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2752377592187,8.08760637486202,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.6024373824309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,1.71868654031819,4.29632955859219,2.05524755931193,2.2661816921691,0.675022500231806,1.35096360967266,2.71885445390523,3.62432218226274,0,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0.476872379894642,0,0,0.592302255241736,0.182927972872773,0,0.135804113845862,0,0.474540072496697,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p7@Gad1}} | ||
|EntrezGene=14415 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_uc008jzm.1_5end | |||
|description=CAGE_peak_7_at_Gad1_5end | |||
|id=chr2:70401686..70401720,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.73e-18!23;CL:0000337!4.73e-18!23;CL:0000540!7.80e-12!33;CL:0000047!7.80e-12!33;CL:0000031!7.80e-12!33;CL:0000404!7.80e-12!33;CL:0000221!6.17e-10!44;CL:0000133!6.17e-10!44;CL:0002319!2.62e-09!43;CL:0000393!4.71e-09!39;CL:0000211!4.71e-09!39;CL:0000055!4.06e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.37e-20,23;CL:0000337,3.37e-20,23;CL:0000540,6.67e-13,33;CL:0000047,6.67e-13,33;CL:0000031,6.67e-13,33;CL:0000404,6.67e-13,33;CL:0000393,2.45e-10,39;CL:0000211,2.45e-10,39;CL:0002319,4.94e-09,43;CL:0000221,9.59e-09,44;CL:0000133,9.59e-09,44;CL:0002614,6.16e-08,3;CL:0002610,1.20e-07,3;CL:0002612,5.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.05e-26!63;UBERON:0000073!3.23e-26!75;UBERON:0001016!3.23e-26!75;UBERON:0001017!3.60e-26!73;UBERON:0005743!3.60e-26!73;UBERON:0001049!1.06e-24!52;UBERON:0005068!1.06e-24!52;UBERON:0006241!1.06e-24!52;UBERON:0007135!1.06e-24!52;UBERON:0004121!3.97e-23!102;UBERON:0000924!3.97e-23!102;UBERON:0006601!3.97e-23!102;UBERON:0002020!4.25e-23!34;UBERON:0000955!7.11e-23!50;UBERON:0006238!7.11e-23!50;UBERON:0002346!2.39e-22!71;UBERON:0003075!2.39e-22!71;UBERON:0007284!2.39e-22!71;UBERON:0002616!8.63e-22!49;UBERON:0003056!9.19e-19!49;UBERON:0002791!7.89e-18!29;UBERON:0003528!7.89e-18!29;UBERON:0001893!7.89e-18!29;UBERON:0007811!5.57e-16!86;UBERON:0003080!1.70e-15!40;UBERON:0002780!1.95e-14!39;UBERON:0001890!1.95e-14!39;UBERON:0006240!1.95e-14!39;UBERON:0000153!1.58e-13!94;UBERON:0002021!1.50e-11!10;UBERON:0000411!1.50e-11!10;UBERON:0001950!1.50e-11!10;UBERON:0003076!2.38e-10!12;UBERON:0003057!2.38e-10!12;UBERON:0000956!4.86e-10!21;UBERON:0001869!4.86e-10!21;UBERON:0000203!4.86e-10!21;UBERON:0002619!5.97e-10!17;UBERON:0002420!8.06e-10!8;UBERON:0007245!8.06e-10!8;UBERON:0010009!8.06e-10!8;UBERON:0010011!8.06e-10!8;UBERON:0000454!8.06e-10!8;UBERON:0002298!2.79e-09!6;UBERON:0002240!4.94e-08!6;UBERON:0005174!4.94e-08!6;UBERON:0001137!4.94e-08!6;UBERON:0001948!9.24e-07!5;UBERON:0002315!9.24e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.30e-37,54;UBERON:0001017,7.00e-36,73;UBERON:0001016,1.05e-34,75;UBERON:0002346,4.42e-34,64;UBERON:0003075,4.42e-34,64;UBERON:0007284,4.42e-34,64;UBERON:0001049,9.47e-34,52;UBERON:0005068,9.47e-34,52;UBERON:0006241,9.47e-34,52;UBERON:0007135,9.47e-34,52;UBERON:0004121,1.77e-32,95;UBERON:0000924,1.77e-32,95;UBERON:0006601,1.77e-32,95;UBERON:0010371,6.77e-29,73;UBERON:0002020,2.53e-27,34;UBERON:0000955,1.14e-25,47;UBERON:0006238,1.14e-25,47;UBERON:0002616,4.65e-24,46;UBERON:0010314,2.83e-21,92;UBERON:0003056,3.60e-21,49;UBERON:0003528,2.64e-19,29;UBERON:0002791,2.64e-19,29;UBERON:0001893,2.64e-19,29;UBERON:0003080,8.43e-19,40;UBERON:0002780,3.29e-17,39;UBERON:0001890,3.29e-17,39;UBERON:0006240,3.29e-17,39;UBERON:0003076,5.19e-17,12;UBERON:0003057,5.19e-17,12;UBERON:0002021,3.83e-15,10;UBERON:0000411,3.83e-15,10;UBERON:0001950,3.83e-15,10;UBERON:0002240,1.86e-12,6;UBERON:0005174,1.86e-12,6;UBERON:0001137,1.86e-12,6;UBERON:0002420,2.84e-12,8;UBERON:0007245,2.84e-12,8;UBERON:0010009,2.84e-12,8;UBERON:0010011,2.84e-12,8;UBERON:0000454,2.84e-12,8;UBERON:0000025,2.28e-11,114;UBERON:0002619,2.48e-10,17;UBERON:0001948,2.52e-10,5;UBERON:0002315,2.52e-10,5;UBERON:0004111,3.81e-10,122;UBERON:0002950,4.18e-10,4;UBERON:0001891,4.18e-10,4;UBERON:0009616,4.18e-10,4;UBERON:0010286,4.18e-10,4;UBERON:0000956,8.48e-10,21;UBERON:0001869,8.48e-10,21;UBERON:0000203,8.48e-10,21;UBERON:0011216,3.12e-08,194;UBERON:0002038,6.16e-08,3;UBERON:0009663,6.16e-08,3;UBERON:0009661,6.16e-08,3;UBERON:0000125,6.16e-08,3;UBERON:0002308,6.16e-08,3;UBERON:0004684,1.20e-07,3;UBERON:0002275,1.20e-07,3;UBERON:0000483,1.76e-07,174;UBERON:0000119,2.63e-07,176;UBERON:0002257,5.52e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,4.23192783417626,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0,2.85650984403804,1.54607978666129,0.489963196859816,0.383381884072945,0,2.20231761998777,5.87361755191863,11.5204899942183,1.18697658957174,1.00636407962651,0.52091337055676,9.77140496504833,5.06486349028512,4.73674568108111,3.83017161115768,2.98980529678116,2.23679334990361,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22058876712702,5.44561437714983,0,0,0,0,7.9389038884556,4.57500602818627,1.25654352112864,3.12883776346098,3.3243009452943,8.3115217823824,5.67844420737152,0.101839363850316,0,0,1.68353484709179,0,0,0,0.452114453507145,0.748401490664606,1.0249097622788,1.49922759295566,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2752377592187,8.08760637486202,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.6024373824309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,1.71868654031819,4.29632955859219,2.05524755931193,2.2661816921691,0.675022500231806,1.35096360967266,2.71885445390523,3.62432218226274,0,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0.476872379894642,0,0,0.592302255241736,0.182927972872773,0,0.135804113845862,0,0.474540072496697,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Gad1 | |||
}} |
Revision as of 00:25, 14 September 2013
Short description: | p7@Gad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -25bp_to_uc008jzm.1_5end |
EntrezGene: | Gad1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.37e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.37e-20 | 23 |
neuron | 6.67e-13 | 33 |
neuronal stem cell | 6.67e-13 | 33 |
neuroblast | 6.67e-13 | 33 |
electrically signaling cell | 6.67e-13 | 33 |
electrically responsive cell | 2.45e-10 | 39 |
electrically active cell | 2.45e-10 | 39 |
neural cell | 4.94e-09 | 43 |
ectodermal cell | 9.59e-09 | 44 |
neurectodermal cell | 9.59e-09 | 44 |
neuron of the substantia nigra | 6.16e-08 | 3 |
raphe nuclei neuron | 1.20e-07 | 3 |
neuron of the ventral spinal cord | 5.52e-07 | 3 |
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