FFCP PHASE1:Mm9::chr2:90725684..90725718,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67445|HGNC=|MCL_coexpression_id=189|UniProt=Q8R066|association_with_transcript=-224bp_to_ENSMUST00000036860,NM_026161,uc008ktq.1_5end|description=CAGE_peak_3_at_C1qtnf4_5end|id=chr2:90725684..90725718,+|ontology_enrichment_celltype=CL:0000117!2.59e-11!23;CL:0000337!2.59e-11!23|ontology_enrichment_celltype_v019_2=CL:0002610,6.98e-10,3;CL:0000117,9.83e-10,23;CL:0000337,9.83e-10,23;CL:0002614,1.42e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.69e-24!52;UBERON:0005068!5.69e-24!52;UBERON:0006241!5.69e-24!52;UBERON:0007135!5.69e-24!52;UBERON:0000955!1.09e-22!50;UBERON:0006238!1.09e-22!50;UBERON:0001017!9.47e-22!73;UBERON:0005743!9.47e-22!73;UBERON:0002616!1.17e-21!49;UBERON:0000073!8.06e-21!75;UBERON:0001016!8.06e-21!75;UBERON:0002020!1.00e-20!34;UBERON:0000033!3.45e-20!63;UBERON:0002346!1.01e-19!71;UBERON:0003075!1.01e-19!71;UBERON:0007284!1.01e-19!71;UBERON:0004121!6.80e-17!102;UBERON:0000924!6.80e-17!102;UBERON:0006601!6.80e-17!102;UBERON:0002791!8.24e-16!29;UBERON:0003528!8.24e-16!29;UBERON:0001893!8.24e-16!29;UBERON:0003080!4.15e-15!40;UBERON:0002780!4.06e-14!39;UBERON:0001890!4.06e-14!39;UBERON:0006240!4.06e-14!39;UBERON:0003056!6.44e-14!49;UBERON:0002021!1.73e-13!10;UBERON:0000411!1.73e-13!10;UBERON:0001950!1.73e-13!10;UBERON:0007811!9.68e-12!86;UBERON:0002619!2.01e-11!17;UBERON:0000956!3.34e-10!21;UBERON:0001869!3.34e-10!21;UBERON:0000203!3.34e-10!21;UBERON:0003076!5.32e-10!12;UBERON:0003057!5.32e-10!12;UBERON:0000153!7.93e-10!94;UBERON:0002298!1.71e-08!6;UBERON:0000025!6.14e-08!114;UBERON:0002240!1.26e-07!6;UBERON:0005174!1.26e-07!6;UBERON:0001137!1.26e-07!6;UBERON:0004111!3.10e-07!122;UBERON:0002420!4.57e-07!8;UBERON:0007245!4.57e-07!8;UBERON:0010009!4.57e-07!8;UBERON:0010011!4.57e-07!8;UBERON:0000454!4.57e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.58e-40,54;UBERON:0001049,5.65e-35,52;UBERON:0005068,5.65e-35,52;UBERON:0006241,5.65e-35,52;UBERON:0007135,5.65e-35,52;UBERON:0001017,2.47e-32,73;UBERON:0001016,2.62e-31,75;UBERON:0000955,1.75e-28,47;UBERON:0006238,1.75e-28,47;UBERON:0002346,2.46e-27,64;UBERON:0003075,2.46e-27,64;UBERON:0007284,2.46e-27,64;UBERON:0002616,1.09e-26,46;UBERON:0002020,1.42e-26,34;UBERON:0002021,1.44e-25,10;UBERON:0000411,1.44e-25,10;UBERON:0001950,1.44e-25,10;UBERON:0004121,1.99e-23,95;UBERON:0000924,1.99e-23,95;UBERON:0006601,1.99e-23,95;UBERON:0010371,3.00e-23,73;UBERON:0003080,1.85e-20,40;UBERON:0003528,2.45e-20,29;UBERON:0002791,2.45e-20,29;UBERON:0001893,2.45e-20,29;UBERON:0002780,1.02e-18,39;UBERON:0001890,1.02e-18,39;UBERON:0006240,1.02e-18,39;UBERON:0010314,3.06e-17,92;UBERON:0002619,3.27e-17,17;UBERON:0000956,2.49e-16,21;UBERON:0001869,2.49e-16,21;UBERON:0000203,2.49e-16,21;UBERON:0003076,5.50e-16,12;UBERON:0003057,5.50e-16,12;UBERON:0003056,6.53e-16,49;UBERON:0000025,8.87e-13,114;UBERON:0004111,1.49e-11,122;UBERON:0002950,6.07e-11,4;UBERON:0001891,6.07e-11,4;UBERON:0009616,6.07e-11,4;UBERON:0010286,6.07e-11,4;UBERON:0002240,6.73e-10,6;UBERON:0005174,6.73e-10,6;UBERON:0001137,6.73e-10,6;UBERON:0004684,6.98e-10,3;UBERON:0002275,6.98e-10,3;UBERON:0002038,1.42e-08,3;UBERON:0009663,1.42e-08,3;UBERON:0009661,1.42e-08,3;UBERON:0000125,1.42e-08,3;UBERON:0002308,1.42e-08,3;UBERON:0011216,3.12e-08,194;UBERON:0001948,9.45e-08,5;UBERON:0002315,9.45e-08,5;UBERON:0004733,1.11e-07,6;UBERON:0004732,1.11e-07,6;UBERON:0002028,1.11e-07,6;UBERON:0007277,1.11e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,3.75476519617743,0.367472397644862,0,0,17.6185409599022,30.7726484785302,32.4109785170674,0.791317726381163,0.365950574409639,0,12.8424179540635,8.4414391504752,4.73674568108111,2.65165726926301,1.70846016958924,0.745597783301202,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,17.5668478206928,24.2958179903608,0,0,0,0,10.1857634795279,2.74500361691176,0.125654352112864,17.2086076990354,11.7629110371952,26.3890816590641,14.9261962022337,0,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,6.30869845692382,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,8.18808008937739,6.91548950893999,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0.165458490457098,0.972255941720238,0.904118764344118,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9532628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| ||
|EntrezGene=67445 | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|UniProt=Q8R066 | |||
|association_with_transcript=-224bp_to_ENSMUST00000036860,NM_026161,uc008ktq.1_5end | |||
|description=CAGE_peak_3_at_C1qtnf4_5end | |||
|id=chr2:90725684..90725718,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.59e-11!23;CL:0000337!2.59e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.98e-10,3;CL:0000117,9.83e-10,23;CL:0000337,9.83e-10,23;CL:0002614,1.42e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.69e-24!52;UBERON:0005068!5.69e-24!52;UBERON:0006241!5.69e-24!52;UBERON:0007135!5.69e-24!52;UBERON:0000955!1.09e-22!50;UBERON:0006238!1.09e-22!50;UBERON:0001017!9.47e-22!73;UBERON:0005743!9.47e-22!73;UBERON:0002616!1.17e-21!49;UBERON:0000073!8.06e-21!75;UBERON:0001016!8.06e-21!75;UBERON:0002020!1.00e-20!34;UBERON:0000033!3.45e-20!63;UBERON:0002346!1.01e-19!71;UBERON:0003075!1.01e-19!71;UBERON:0007284!1.01e-19!71;UBERON:0004121!6.80e-17!102;UBERON:0000924!6.80e-17!102;UBERON:0006601!6.80e-17!102;UBERON:0002791!8.24e-16!29;UBERON:0003528!8.24e-16!29;UBERON:0001893!8.24e-16!29;UBERON:0003080!4.15e-15!40;UBERON:0002780!4.06e-14!39;UBERON:0001890!4.06e-14!39;UBERON:0006240!4.06e-14!39;UBERON:0003056!6.44e-14!49;UBERON:0002021!1.73e-13!10;UBERON:0000411!1.73e-13!10;UBERON:0001950!1.73e-13!10;UBERON:0007811!9.68e-12!86;UBERON:0002619!2.01e-11!17;UBERON:0000956!3.34e-10!21;UBERON:0001869!3.34e-10!21;UBERON:0000203!3.34e-10!21;UBERON:0003076!5.32e-10!12;UBERON:0003057!5.32e-10!12;UBERON:0000153!7.93e-10!94;UBERON:0002298!1.71e-08!6;UBERON:0000025!6.14e-08!114;UBERON:0002240!1.26e-07!6;UBERON:0005174!1.26e-07!6;UBERON:0001137!1.26e-07!6;UBERON:0004111!3.10e-07!122;UBERON:0002420!4.57e-07!8;UBERON:0007245!4.57e-07!8;UBERON:0010009!4.57e-07!8;UBERON:0010011!4.57e-07!8;UBERON:0000454!4.57e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.58e-40,54;UBERON:0001049,5.65e-35,52;UBERON:0005068,5.65e-35,52;UBERON:0006241,5.65e-35,52;UBERON:0007135,5.65e-35,52;UBERON:0001017,2.47e-32,73;UBERON:0001016,2.62e-31,75;UBERON:0000955,1.75e-28,47;UBERON:0006238,1.75e-28,47;UBERON:0002346,2.46e-27,64;UBERON:0003075,2.46e-27,64;UBERON:0007284,2.46e-27,64;UBERON:0002616,1.09e-26,46;UBERON:0002020,1.42e-26,34;UBERON:0002021,1.44e-25,10;UBERON:0000411,1.44e-25,10;UBERON:0001950,1.44e-25,10;UBERON:0004121,1.99e-23,95;UBERON:0000924,1.99e-23,95;UBERON:0006601,1.99e-23,95;UBERON:0010371,3.00e-23,73;UBERON:0003080,1.85e-20,40;UBERON:0003528,2.45e-20,29;UBERON:0002791,2.45e-20,29;UBERON:0001893,2.45e-20,29;UBERON:0002780,1.02e-18,39;UBERON:0001890,1.02e-18,39;UBERON:0006240,1.02e-18,39;UBERON:0010314,3.06e-17,92;UBERON:0002619,3.27e-17,17;UBERON:0000956,2.49e-16,21;UBERON:0001869,2.49e-16,21;UBERON:0000203,2.49e-16,21;UBERON:0003076,5.50e-16,12;UBERON:0003057,5.50e-16,12;UBERON:0003056,6.53e-16,49;UBERON:0000025,8.87e-13,114;UBERON:0004111,1.49e-11,122;UBERON:0002950,6.07e-11,4;UBERON:0001891,6.07e-11,4;UBERON:0009616,6.07e-11,4;UBERON:0010286,6.07e-11,4;UBERON:0002240,6.73e-10,6;UBERON:0005174,6.73e-10,6;UBERON:0001137,6.73e-10,6;UBERON:0004684,6.98e-10,3;UBERON:0002275,6.98e-10,3;UBERON:0002038,1.42e-08,3;UBERON:0009663,1.42e-08,3;UBERON:0009661,1.42e-08,3;UBERON:0000125,1.42e-08,3;UBERON:0002308,1.42e-08,3;UBERON:0011216,3.12e-08,194;UBERON:0001948,9.45e-08,5;UBERON:0002315,9.45e-08,5;UBERON:0004733,1.11e-07,6;UBERON:0004732,1.11e-07,6;UBERON:0002028,1.11e-07,6;UBERON:0007277,1.11e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,3.75476519617743,0.367472397644862,0,0,17.6185409599022,30.7726484785302,32.4109785170674,0.791317726381163,0.365950574409639,0,12.8424179540635,8.4414391504752,4.73674568108111,2.65165726926301,1.70846016958924,0.745597783301202,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,17.5668478206928,24.2958179903608,0,0,0,0,10.1857634795279,2.74500361691176,0.125654352112864,17.2086076990354,11.7629110371952,26.3890816590641,14.9261962022337,0,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,6.30869845692382,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,8.18808008937739,6.91548950893999,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0.165458490457098,0.972255941720238,0.904118764344118,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,4.14292712856459,6.30185064783336,8.07709957015332,13.7016503954128,21.9064230243013,12.8254275044043,14.8605997063993,14.0474146785103,16.5683299760582,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0.0640251524048693,0.17230640686684,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0.385813221962283,0,0,0.644613162144895,0.191288332068843,0,0.231867835620421 | |||
|short_description=p3@C1qtnf4 | |||
}} |
Revision as of 00:49, 14 September 2013
Short description: | p3@C1qtnf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_C1qtnf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | -224bp_to_ENSMUST00000036860, NM_026161, uc008ktq.1_5end |
EntrezGene: | C1qtnf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.98e-10 | 3 |
CNS neuron (sensu Vertebrata) | 9.83e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.83e-10 | 23 |
neuron of the substantia nigra | 1.42e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.