FFCP PHASE1:Mm9::chr2:91816465..91816503,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=104418|HGNC=|MCL_coexpression_id=90|UniProt=A2AHJ7|association_with_transcript=-444bp_to_ENSMUST00000099709_5end|description=CAGE_peak_5_at_Dgkz_5end|id=chr2:91816465..91816503,-|ontology_enrichment_celltype=CL:0000117!6.68e-15!23;CL:0000337!6.68e-15!23;CL:0000540!2.30e-09!33;CL:0000047!2.30e-09!33;CL:0000031!2.30e-09!33;CL:0000404!2.30e-09!33;CL:0000221!6.68e-08!44;CL:0000133!6.68e-08!44;CL:0002319!9.62e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.89e-18,23;CL:0000337,6.89e-18,23;CL:0000540,3.10e-11,33;CL:0000047,3.10e-11,33;CL:0000031,3.10e-11,33;CL:0000404,3.10e-11,33;CL:0000393,6.61e-09,39;CL:0000211,6.61e-09,39;CL:0002319,1.00e-07,43;CL:0000221,1.82e-07,44;CL:0000133,1.82e-07,44;CL:0002614,6.72e-07,3;CL:0002610,7.35e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.31e-23!52;UBERON:0005068!1.31e-23!52;UBERON:0006241!1.31e-23!52;UBERON:0007135!1.31e-23!52;UBERON:0000955!1.64e-22!50;UBERON:0006238!1.64e-22!50;UBERON:0001017!6.55e-22!73;UBERON:0005743!6.55e-22!73;UBERON:0002616!1.19e-21!49;UBERON:0000033!4.19e-21!63;UBERON:0000073!9.30e-21!75;UBERON:0001016!9.30e-21!75;UBERON:0007811!9.05e-20!86;UBERON:0002020!1.33e-18!34;UBERON:0002346!6.37e-18!71;UBERON:0003075!6.37e-18!71;UBERON:0007284!6.37e-18!71;UBERON:0000153!4.20e-17!94;UBERON:0002791!5.26e-15!29;UBERON:0003528!5.26e-15!29;UBERON:0001893!5.26e-15!29;UBERON:0003080!5.63e-15!40;UBERON:0003056!9.02e-15!49;UBERON:0004121!1.06e-14!102;UBERON:0000924!1.06e-14!102;UBERON:0006601!1.06e-14!102;UBERON:0002780!3.62e-14!39;UBERON:0001890!3.62e-14!39;UBERON:0006240!3.62e-14!39;UBERON:0003076!9.57e-10!12;UBERON:0003057!9.57e-10!12;UBERON:0000956!4.64e-09!21;UBERON:0001869!4.64e-09!21;UBERON:0000203!4.64e-09!21;UBERON:0002619!1.81e-08!17;UBERON:0002420!1.21e-07!8;UBERON:0007245!1.21e-07!8;UBERON:0010009!1.21e-07!8;UBERON:0010011!1.21e-07!8;UBERON:0000454!1.21e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-35,54;UBERON:0001049,1.13e-31,52;UBERON:0005068,1.13e-31,52;UBERON:0006241,1.13e-31,52;UBERON:0007135,1.13e-31,52;UBERON:0001017,5.45e-29,73;UBERON:0001016,5.70e-28,75;UBERON:0000955,1.05e-26,47;UBERON:0006238,1.05e-26,47;UBERON:0002616,3.68e-25,46;UBERON:0002020,1.23e-24,34;UBERON:0002346,3.61e-24,64;UBERON:0003075,3.61e-24,64;UBERON:0007284,3.61e-24,64;UBERON:0003080,1.63e-20,40;UBERON:0010371,3.62e-20,73;UBERON:0004121,3.84e-20,95;UBERON:0000924,3.84e-20,95;UBERON:0006601,3.84e-20,95;UBERON:0003528,9.99e-20,29;UBERON:0002791,9.99e-20,29;UBERON:0001893,9.99e-20,29;UBERON:0002780,5.14e-19,39;UBERON:0001890,5.14e-19,39;UBERON:0006240,5.14e-19,39;UBERON:0003056,1.28e-15,49;UBERON:0010314,2.61e-14,92;UBERON:0003076,7.39e-12,12;UBERON:0003057,7.39e-12,12;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0002619,3.93e-11,17;UBERON:0000956,1.74e-10,21;UBERON:0001869,1.74e-10,21;UBERON:0000203,1.74e-10,21;UBERON:0000025,5.30e-10,114;UBERON:0004111,7.83e-09,122;UBERON:0002950,9.24e-09,4;UBERON:0001891,9.24e-09,4;UBERON:0009616,9.24e-09,4;UBERON:0010286,9.24e-09,4;UBERON:0002021,9.71e-08,10;UBERON:0000411,9.71e-08,10;UBERON:0001950,9.71e-08,10;UBERON:0002240,1.04e-07,6;UBERON:0005174,1.04e-07,6;UBERON:0001137,1.04e-07,6;UBERON:0002038,6.72e-07,3;UBERON:0009663,6.72e-07,3;UBERON:0009661,6.72e-07,3;UBERON:0000125,6.72e-07,3;UBERON:0002308,6.72e-07,3;UBERON:0004684,7.35e-07,3;UBERON:0002275,7.35e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0,0.468129052643987,0,0.239316476986009,2.05440875917447,2.27293046289393,0,0.202475267389826,0,0,0.137114433605739,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0,1.99955689082663,3.97563373712904,2.9397791811589,3.45043695665651,7.35375029288017,8.8092704799511,3.31987079021488,4.45458946443106,0.923204014111357,1.55528994124096,1.04182674111352,6.97957497503452,3.93933827022176,4.5839474333043,2.65165726926301,1.99320353118744,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,14.6390398505774,13.1951425292477,0,0,0,0,8.53806644607489,31.5675415944852,21.8638572676384,9.21268897019065,6.64860189058859,17.454195743003,19.6311928311987,0,0,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.340182495756639,0,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0,0.199034266818493,0,0,0,0.207125772535502,0,0.540186184383045,0,0,0.462801338662135,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,10.7247873767705,0.102904612379284,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1894914117704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| ||
|EntrezGene=104418 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=A2AHJ7 | |||
|association_with_transcript=-444bp_to_ENSMUST00000099709_5end | |||
|description=CAGE_peak_5_at_Dgkz_5end | |||
|id=chr2:91816465..91816503,- | |||
|ontology_enrichment_celltype=CL:0000117!6.68e-15!23;CL:0000337!6.68e-15!23;CL:0000540!2.30e-09!33;CL:0000047!2.30e-09!33;CL:0000031!2.30e-09!33;CL:0000404!2.30e-09!33;CL:0000221!6.68e-08!44;CL:0000133!6.68e-08!44;CL:0002319!9.62e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.89e-18,23;CL:0000337,6.89e-18,23;CL:0000540,3.10e-11,33;CL:0000047,3.10e-11,33;CL:0000031,3.10e-11,33;CL:0000404,3.10e-11,33;CL:0000393,6.61e-09,39;CL:0000211,6.61e-09,39;CL:0002319,1.00e-07,43;CL:0000221,1.82e-07,44;CL:0000133,1.82e-07,44;CL:0002614,6.72e-07,3;CL:0002610,7.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.31e-23!52;UBERON:0005068!1.31e-23!52;UBERON:0006241!1.31e-23!52;UBERON:0007135!1.31e-23!52;UBERON:0000955!1.64e-22!50;UBERON:0006238!1.64e-22!50;UBERON:0001017!6.55e-22!73;UBERON:0005743!6.55e-22!73;UBERON:0002616!1.19e-21!49;UBERON:0000033!4.19e-21!63;UBERON:0000073!9.30e-21!75;UBERON:0001016!9.30e-21!75;UBERON:0007811!9.05e-20!86;UBERON:0002020!1.33e-18!34;UBERON:0002346!6.37e-18!71;UBERON:0003075!6.37e-18!71;UBERON:0007284!6.37e-18!71;UBERON:0000153!4.20e-17!94;UBERON:0002791!5.26e-15!29;UBERON:0003528!5.26e-15!29;UBERON:0001893!5.26e-15!29;UBERON:0003080!5.63e-15!40;UBERON:0003056!9.02e-15!49;UBERON:0004121!1.06e-14!102;UBERON:0000924!1.06e-14!102;UBERON:0006601!1.06e-14!102;UBERON:0002780!3.62e-14!39;UBERON:0001890!3.62e-14!39;UBERON:0006240!3.62e-14!39;UBERON:0003076!9.57e-10!12;UBERON:0003057!9.57e-10!12;UBERON:0000956!4.64e-09!21;UBERON:0001869!4.64e-09!21;UBERON:0000203!4.64e-09!21;UBERON:0002619!1.81e-08!17;UBERON:0002420!1.21e-07!8;UBERON:0007245!1.21e-07!8;UBERON:0010009!1.21e-07!8;UBERON:0010011!1.21e-07!8;UBERON:0000454!1.21e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-35,54;UBERON:0001049,1.13e-31,52;UBERON:0005068,1.13e-31,52;UBERON:0006241,1.13e-31,52;UBERON:0007135,1.13e-31,52;UBERON:0001017,5.45e-29,73;UBERON:0001016,5.70e-28,75;UBERON:0000955,1.05e-26,47;UBERON:0006238,1.05e-26,47;UBERON:0002616,3.68e-25,46;UBERON:0002020,1.23e-24,34;UBERON:0002346,3.61e-24,64;UBERON:0003075,3.61e-24,64;UBERON:0007284,3.61e-24,64;UBERON:0003080,1.63e-20,40;UBERON:0010371,3.62e-20,73;UBERON:0004121,3.84e-20,95;UBERON:0000924,3.84e-20,95;UBERON:0006601,3.84e-20,95;UBERON:0003528,9.99e-20,29;UBERON:0002791,9.99e-20,29;UBERON:0001893,9.99e-20,29;UBERON:0002780,5.14e-19,39;UBERON:0001890,5.14e-19,39;UBERON:0006240,5.14e-19,39;UBERON:0003056,1.28e-15,49;UBERON:0010314,2.61e-14,92;UBERON:0003076,7.39e-12,12;UBERON:0003057,7.39e-12,12;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0002619,3.93e-11,17;UBERON:0000956,1.74e-10,21;UBERON:0001869,1.74e-10,21;UBERON:0000203,1.74e-10,21;UBERON:0000025,5.30e-10,114;UBERON:0004111,7.83e-09,122;UBERON:0002950,9.24e-09,4;UBERON:0001891,9.24e-09,4;UBERON:0009616,9.24e-09,4;UBERON:0010286,9.24e-09,4;UBERON:0002021,9.71e-08,10;UBERON:0000411,9.71e-08,10;UBERON:0001950,9.71e-08,10;UBERON:0002240,1.04e-07,6;UBERON:0005174,1.04e-07,6;UBERON:0001137,1.04e-07,6;UBERON:0002038,6.72e-07,3;UBERON:0009663,6.72e-07,3;UBERON:0009661,6.72e-07,3;UBERON:0000125,6.72e-07,3;UBERON:0002308,6.72e-07,3;UBERON:0004684,7.35e-07,3;UBERON:0002275,7.35e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0,0.468129052643987,0,0.239316476986009,2.05440875917447,2.27293046289393,0,0.202475267389826,0,0,0.137114433605739,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0,1.99955689082663,3.97563373712904,2.9397791811589,3.45043695665651,7.35375029288017,8.8092704799511,3.31987079021488,4.45458946443106,0.923204014111357,1.55528994124096,1.04182674111352,6.97957497503452,3.93933827022176,4.5839474333043,2.65165726926301,1.99320353118744,0.931997229126503,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,14.6390398505774,13.1951425292477,0,0,0,0,8.53806644607489,31.5675415944852,21.8638572676384,9.21268897019065,6.64860189058859,17.454195743003,19.6311928311987,0,0,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.340182495756639,0,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0,0.199034266818493,0,0,0,0.207125772535502,0,0.540186184383045,0,0,0.462801338662135,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,10.7247873767705,0.102904612379284,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,3.16471553798949,0,0,0,0,0,0.477937595905104,0,0,0,0,0,4.4984984299053,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0,1.54667864109319,3.42541259885321,0.755393897389701,1.35004500046361,1.80128481289688,2.71885445390523,1.03552062350364,0,0,0,0,0.628839487883947,0.367687016900028,0.44449345560323,1.03017528619447,0.320919209591815,1.51618327058278,1.01391719956096,0.754505365544305,0.842773567228942,0.960377286073039,0.976402972245426,0.476293691283074,0.811190281613988,0.578727661391115,1.23625770240992,0.588795680537589,0.342869252385415,0.70990322463735,0.476872379894642,0.145346416632329,0.470546902076653,0.761531471025089,1.46342378298218,1.05227884575137,0.271608227691724,1.12228454331548,0.949080144993393,0.788035859004508,1.22769312950907,0.77468420592983,0.578719832943424,2.49810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p5@Dgkz | |||
}} |
Revision as of 00:53, 14 September 2013
Short description: | p5@Dgkz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dgkz_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -444bp_to_ENSMUST00000099709_5end |
EntrezGene: | Dgkz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.89e-18 | 23 |
neuroblast (sensu Vertebrata) | 6.89e-18 | 23 |
neuron | 3.10e-11 | 33 |
neuronal stem cell | 3.10e-11 | 33 |
neuroblast | 3.10e-11 | 33 |
electrically signaling cell | 3.10e-11 | 33 |
electrically responsive cell | 6.61e-09 | 39 |
electrically active cell | 6.61e-09 | 39 |
neural cell | 1.00e-07 | 43 |
ectodermal cell | 1.82e-07 | 44 |
neurectodermal cell | 1.82e-07 | 44 |
neuron of the substantia nigra | 6.72e-07 | 3 |
raphe nuclei neuron | 7.35e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.