FFCP PHASE1:Hg19::chr8:80523962..80523991,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11075|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10577|TSSclassifier=S|UniProt=E5RGX5|association_with_transcript=0bp_to_ENST00000518491_5end|coexpression_cluster_id=C10|description=CAGE_peak_3_at_STMN2_5end|id=chr8:80523962..80523991,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002617;9.73e-09;2!CL:0000136;3.72e-07;13!CL:0000540;7.36e-07;6!CL:0000404;7.36e-07;6|ontology_enrichment_celltype_v019_2=CL:0002617,8.19e-09,2;CL:0000047,1.55e-08,8;CL:0000540,7.16e-07,6;CL:0000031,7.16e-07,6;CL:0000404,7.16e-07,6|ontology_enrichment_development_v019=UBERON:0006215;1.25e-12;3!UBERON:0006601;7.41e-11;82!UBERON:0010122;4.90e-09;2!CL:0000031;7.36e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.14e-53!82;UBERON:0005743!2.50e-52!86;UBERON:0000073!1.03e-51!94;UBERON:0001016!1.03e-51!94;UBERON:0001049!6.88e-51!57;UBERON:0005068!6.88e-51!57;UBERON:0006241!6.88e-51!57;UBERON:0007135!6.88e-51!57;UBERON:0000955!7.75e-46!69;UBERON:0006238!7.75e-46!69;UBERON:0002616!7.21e-44!59;UBERON:0002020!2.38e-40!34;UBERON:0003528!2.38e-40!34;UBERON:0001869!3.14e-40!32;UBERON:0001893!4.93e-40!34;UBERON:0002780!2.18e-39!41;UBERON:0001890!2.18e-39!41;UBERON:0006240!2.18e-39!41;UBERON:0002791!2.07e-38!33;UBERON:0003080!3.21e-38!42;UBERON:0003075!3.16e-37!86;UBERON:0007284!3.16e-37!86;UBERON:0002619!1.93e-36!22;UBERON:0002346!6.39e-35!90;UBERON:0001950!3.07e-33!20;UBERON:0000956!2.19e-31!25;UBERON:0000203!2.19e-31!25;UBERON:0004121!8.02e-29!169;UBERON:0003056!5.27e-28!61;UBERON:0000924!9.80e-28!173;UBERON:0006601!9.80e-28!173;UBERON:0007023!1.34e-26!115;UBERON:0000033!1.42e-26!123;UBERON:0000153!1.23e-24!129;UBERON:0007811!1.23e-24!129;UBERON:0000475!6.96e-17!365;UBERON:0003076!2.29e-13!15;UBERON:0003057!2.29e-13!15;UBERON:0004733!9.07e-12!12;UBERON:0002028!9.07e-12!12;UBERON:0007277!9.07e-12!12;UBERON:0000200!1.10e-11!6;UBERON:0001871!1.50e-11!7;UBERON:0004732!1.06e-10!13;UBERON:0002420!2.42e-10!9;UBERON:0007245!2.42e-10!9;UBERON:0010009!2.42e-10!9;UBERON:0010011!2.42e-10!9;UBERON:0000454!2.42e-10!9;UBERON:0002308!2.56e-10!9;UBERON:0000125!2.56e-10!9;UBERON:0001872!3.67e-10!5;UBERON:0002021!1.08e-09!5;UBERON:0000349!1.22e-09!5;UBERON:0000369!1.04e-08!4;UBERON:0002435!1.04e-08!4;UBERON:0000204!1.04e-08!4;UBERON:0010082!1.04e-08!4;UBERON:0000025!1.65e-08!194;UBERON:0000064!4.15e-08!219;UBERON:0002298!4.45e-08!8;UBERON:0000468!1.06e-07!659;UBERON:0002680!1.09e-07!9;UBERON:0001895!1.09e-07!9;UBERON:0010092!1.09e-07!9;UBERON:0009663!2.62e-07!7;UBERON:0005383!4.15e-07!3;UBERON:0005382!4.15e-07!3;UBERON:0000483!9.46e-07!309|ontology_enrichment_uberon_v019=UBERON:0001869;2.08e-55;32!UBERON:0003528;9.39e-55;34!UBERON:0002020;9.39e-55;34!UBERON:0002791;2.17e-52;32!UBERON:0002619;6.97e-50;22!UBERON:0001893;4.40e-49;34!UBERON:0000956;1.33e-43;25!UBERON:0000203;1.33e-43;25!UBERON:0001950;1.61e-43;20!UBERON:0002780;7.24e-41;41!UBERON:0001890;7.24e-41;41!UBERON:0000073;2.19e-37;53!UBERON:0002616;2.19e-37;53!UBERON:0000955;3.45e-30;68!UBERON:0001017;1.14e-25;75!UBERON:0001016;5.92e-22;83!UBERON:0000125;3.46e-20;9!UBERON:0002308;3.46e-20;9!UBERON:0000369;4.58e-16;4!UBERON:0002435;4.58e-16;4!UBERON:0000204;4.58e-16;4!UBERON:0000200;7.35e-16;6!UBERON:0002420;2.80e-15;9!UBERON:0007245;2.80e-15;9!UBERON:0010009;2.80e-15;9!UBERON:0010011;2.80e-15;9!UBERON:0000454;2.80e-15;9!UBERON:0002680;4.69e-15;9!UBERON:0001895;4.69e-15;9!UBERON:0004733;7.49e-15;12!UBERON:0002028;7.49e-15;12!UBERON:0009663;5.30e-14;7!UBERON:0001871;7.34e-14;6!UBERON:0004732;1.24e-13;13!UBERON:0005383;8.25e-13;3!UBERON:0005382;8.25e-13;3!UBERON:0001872;1.01e-12;5!UBERON:0000349;4.46e-12;5!UBERON:0000988;5.11e-12;3!UBERON:0001870;5.11e-12;3!UBERON:0007023;2.18e-10;114!UBERON:0002298;3.18e-10;6!UBERON:0011216;1.60e-09;132!UBERON:0001873;4.90e-09;2!UBERON:0002771;8.66e-09;2!UBERON:0002702;9.73e-09;2!UBERON:0001954;3.01e-08;2!UBERON:0002148;3.01e-08;2!UBERON:0006331;3.01e-08;2!UBERON:0009662;3.01e-08;2!UBERON:0003022;3.01e-08;2!UBERON:0002421;3.01e-08;2!UBERON:0002600;3.01e-08;2!UBERON:0002021;8.82e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-69,53;UBERON:0002616,1.83e-69,53;UBERON:0001017,1.97e-69,81;UBERON:0001049,2.21e-65,56;UBERON:0005068,2.21e-65,56;UBERON:0006241,2.21e-65,56;UBERON:0007135,2.21e-65,56;UBERON:0000955,9.72e-63,68;UBERON:0006238,9.72e-63,68;UBERON:0003528,2.02e-62,34;UBERON:0002020,2.02e-62,34;UBERON:0001016,1.00e-61,89;UBERON:0001869,2.47e-61,32;UBERON:0001893,1.78e-57,34;UBERON:0002791,3.14e-56,32;UBERON:0002780,2.22e-55,41;UBERON:0001890,2.22e-55,41;UBERON:0003080,2.22e-55,41;UBERON:0006240,2.22e-55,41;UBERON:0002619,7.96e-50,22;UBERON:0001950,1.37e-43,20;UBERON:0000956,1.49e-43,25;UBERON:0000203,1.49e-43,25;UBERON:0003075,2.29e-42,82;UBERON:0007284,2.29e-42,82;UBERON:0002346,4.78e-40,86;UBERON:0003056,2.21e-35,61;UBERON:0010371,8.43e-32,104;UBERON:0007023,2.06e-28,11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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10577 | |||
|TSSclassifier=S | |||
|UniProt=E5RGX5 | |||
|association_with_transcript=0bp_to_ENST00000518491_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_STMN2_5end | |||
|id=chr8:80523962..80523991,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002617;9.73e-09;2!CL:0000136;3.72e-07;13!CL:0000540;7.36e-07;6!CL:0000404;7.36e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,8.19e-09,2;CL:0000047,1.55e-08,8;CL:0000540,7.16e-07,6;CL:0000031,7.16e-07,6;CL:0000404,7.16e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.25e-12;3!UBERON:0006601;7.41e-11;82!UBERON:0010122;4.90e-09;2!CL:0000031;7.36e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@STMN2 | |||
}} |
Revision as of 06:06, 14 September 2013
Short description: | p3@STMN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_STMN2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000518491_5end |
EntrezGene: | STMN2 |
HGNC: | 10577 |
UniProt: | E5RGX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 8.19e-09 | 2 |
neuronal stem cell | 1.55e-08 | 8 |
neuron | 7.16e-07 | 6 |
neuroblast | 7.16e-07 | 6 |
electrically signaling cell | 7.16e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.