FFCP PHASE1:Mm9::chr6:144997329..144997341,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12035|HGNC=|MCL_coexpression_id=159|UniProt=Q8CBC8,F8WIH8|association_with_transcript=0bp_to_ENSMUST00000032402,ENSMUST00000087468,NM_001024468,uc009eqs.2_5end|description=CAGE_peak_14_at_Bcat1_5end|id=chr6:144997329..144997341,-|ontology_enrichment_celltype=CL:0000117!1.59e-19!23;CL:0000337!1.59e-19!23;CL:0000540!6.73e-17!33;CL:0000047!6.73e-17!33;CL:0000031!6.73e-17!33;CL:0000404!6.73e-17!33;CL:0002319!1.85e-15!43;CL:0000221!8.28e-15!44;CL:0000133!8.28e-15!44;CL:0000393!2.00e-13!39;CL:0000211!2.00e-13!39;CL:0000055!2.80e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.44e-31,23;CL:0000337,5.44e-31,23;CL:0000540,4.81e-20,33;CL:0000047,4.81e-20,33;CL:0000031,4.81e-20,33;CL:0000404,4.81e-20,33;CL:0002319,1.73e-17,43;CL:0000221,5.77e-17,44;CL:0000133,5.77e-17,44;CL:0000393,3.49e-16,39;CL:0000211,3.49e-16,39;CL:0002321,1.09e-08,70;CL:0002610,4.85e-08,3;CL:0002614,5.11e-08,3;CL:0000120,1.62e-07,3;CL:0002612,4.45e-07,3;CL:0002613,4.67e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.10e-34!73;UBERON:0005743!1.10e-34!73;UBERON:0000073!2.84e-34!75;UBERON:0001016!2.84e-34!75;UBERON:0002346!7.31e-33!71;UBERON:0003075!7.31e-33!71;UBERON:0007284!7.31e-33!71;UBERON:0004121!1.62e-32!102;UBERON:0000924!1.62e-32!102;UBERON:0006601!1.62e-32!102;UBERON:0001049!3.45e-29!52;UBERON:0005068!3.45e-29!52;UBERON:0006241!3.45e-29!52;UBERON:0007135!3.45e-29!52;UBERON:0000033!7.83e-29!63;UBERON:0000955!1.41e-27!50;UBERON:0006238!1.41e-27!50;UBERON:0002616!9.24e-27!49;UBERON:0003056!1.18e-25!49;UBERON:0002020!5.50e-24!34;UBERON:0003080!3.21e-21!40;UBERON:0002780!2.60e-20!39;UBERON:0001890!2.60e-20!39;UBERON:0006240!2.60e-20!39;UBERON:0002791!1.54e-19!29;UBERON:0003528!1.54e-19!29;UBERON:0001893!1.54e-19!29;UBERON:0007811!4.13e-16!86;UBERON:0000153!2.13e-14!94;UBERON:0000956!1.06e-12!21;UBERON:0001869!1.06e-12!21;UBERON:0000203!1.06e-12!21;UBERON:0002619!8.78e-11!17;UBERON:0003076!2.28e-08!12;UBERON:0003057!2.28e-08!12;UBERON:0002021!2.67e-08!10;UBERON:0000411!2.67e-08!10;UBERON:0001950!2.67e-08!10;UBERON:0002420!3.28e-08!8;UBERON:0007245!3.28e-08!8;UBERON:0010009!3.28e-08!8;UBERON:0010011!3.28e-08!8;UBERON:0000454!3.28e-08!8;UBERON:0002298!5.86e-07!6;UBERON:0000025!6.22e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.31e-45,73;UBERON:0001016,9.20e-44,75;UBERON:0000073,6.48e-43,54;UBERON:0001049,1.30e-38,52;UBERON:0005068,1.30e-38,52;UBERON:0006241,1.30e-38,52;UBERON:0007135,1.30e-38,52;UBERON:0002020,1.22e-34,34;UBERON:0004121,2.17e-34,95;UBERON:0000924,2.17e-34,95;UBERON:0006601,2.17e-34,95;UBERON:0002346,9.04e-32,64;UBERON:0003075,9.04e-32,64;UBERON:0007284,9.04e-32,64;UBERON:0000955,9.61e-30,47;UBERON:0006238,9.61e-30,47;UBERON:0002616,3.17e-28,46;UBERON:0010371,7.77e-27,73;UBERON:0003528,1.66e-25,29;UBERON:0002791,1.66e-25,29;UBERON:0001893,1.66e-25,29;UBERON:0003080,1.43e-23,40;UBERON:0002780,6.51e-22,39;UBERON:0001890,6.51e-22,39;UBERON:0006240,6.51e-22,39;UBERON:0003056,8.73e-20,49;UBERON:0010314,1.37e-19,92;UBERON:0002420,1.14e-16,8;UBERON:0007245,1.14e-16,8;UBERON:0010009,1.14e-16,8;UBERON:0010011,1.14e-16,8;UBERON:0000454,1.14e-16,8;UBERON:0003076,5.58e-16,12;UBERON:0003057,5.58e-16,12;UBERON:0002021,5.70e-14,10;UBERON:0000411,5.70e-14,10;UBERON:0001950,5.70e-14,10;UBERON:0002619,1.88e-13,17;UBERON:0000025,3.29e-13,114;UBERON:0002240,1.01e-12,6;UBERON:0005174,1.01e-12,6;UBERON:0001137,1.01e-12,6;UBERON:0000956,2.60e-12,21;UBERON:0001869,2.60e-12,21;UBERON:0000203,2.60e-12,21;UBERON:0004111,8.11e-12,122;UBERON:0011216,2.71e-11,194;UBERON:0001948,5.68e-11,5;UBERON:0002315,5.68e-11,5;UBERON:0000369,2.78e-10,5;UBERON:0002435,2.78e-10,5;UBERON:0000204,2.78e-10,5;UBERON:0010082,2.78e-10,5;UBERON:0002950,5.15e-10,4;UBERON:0001891,5.15e-10,4;UBERON:0009616,5.15e-10,4;UBERON:0010286,5.15e-10,4;UBERON:0004684,4.85e-08,3;UBERON:0002275,4.85e-08,3;UBERON:0002038,5.11e-08,3;UBERON:0009663,5.11e-08,3;UBERON:0009661,5.11e-08,3;UBERON:0000125,5.11e-08,3;UBERON:0002308,5.11e-08,3;UBERON:0002257,4.45e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.58328969722285,1.1198913730029,2.87505128729943,0,0,0,0,0.286533439938757,0,6.27181028664753,8.99284664762456,6.97214543856797,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.420649922702764,8.2838785477103,6.18431914664518,1.71487118900936,1.72521847832825,0.919218786610021,12.1127469099328,9.83192503255945,9.67721159514334,6.85808696197008,4.57438218012048,5.2091337055676,14.7966989470732,9.56696437053856,9.77908785771585,8.54422897873636,4.9830088279686,3.54158947068071,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,1.46612694769419,0,0,0,0,8.23848516726525,4.11750542536764,2.26177833803156,2.08589184230732,0.255715457330331,5.40248915854856,6.32740925964255,0,0,0,0.210441855886474,0.390361328888111,0.919608417733892,0.720248519221397,0.150704817835715,0.612328492361951,0.896796041993948,0.843315521037559,1.29351685369508,0.431135985865684,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.10289948564127,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,5.86058432961016,0,0,0,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,2.89189184779626,1.13552068166615,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0,0,0.535106452806212,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.836353184057875,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,2.25900737046827,5.52390283808612,2.86447756719698,1.71853182343688,2.74033007908257,0.755393897389701,1.35004500046361,3.15224842256954,1.81256963593682,4.14208249401456,0.518936737920883,0,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0.565879024158229,0.187283014939765,0.0640251524048693,0.34461281373368,0,0.811190281613988,0,0.412085900803307,0.294397840268795,0.342869252385415,0,0.476872379894642,0.290692833264657,0.658765662907314,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0,0.749431733813838,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0|short_description=p14@Bcat1}} | ||
|EntrezGene=12035 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=Q8CBC8,F8WIH8 | |||
|association_with_transcript=0bp_to_ENSMUST00000032402,ENSMUST00000087468,NM_001024468,uc009eqs.2_5end | |||
|description=CAGE_peak_14_at_Bcat1_5end | |||
|id=chr6:144997329..144997341,- | |||
|ontology_enrichment_celltype=CL:0000117!1.59e-19!23;CL:0000337!1.59e-19!23;CL:0000540!6.73e-17!33;CL:0000047!6.73e-17!33;CL:0000031!6.73e-17!33;CL:0000404!6.73e-17!33;CL:0002319!1.85e-15!43;CL:0000221!8.28e-15!44;CL:0000133!8.28e-15!44;CL:0000393!2.00e-13!39;CL:0000211!2.00e-13!39;CL:0000055!2.80e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.44e-31,23;CL:0000337,5.44e-31,23;CL:0000540,4.81e-20,33;CL:0000047,4.81e-20,33;CL:0000031,4.81e-20,33;CL:0000404,4.81e-20,33;CL:0002319,1.73e-17,43;CL:0000221,5.77e-17,44;CL:0000133,5.77e-17,44;CL:0000393,3.49e-16,39;CL:0000211,3.49e-16,39;CL:0002321,1.09e-08,70;CL:0002610,4.85e-08,3;CL:0002614,5.11e-08,3;CL:0000120,1.62e-07,3;CL:0002612,4.45e-07,3;CL:0002613,4.67e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-34!73;UBERON:0005743!1.10e-34!73;UBERON:0000073!2.84e-34!75;UBERON:0001016!2.84e-34!75;UBERON:0002346!7.31e-33!71;UBERON:0003075!7.31e-33!71;UBERON:0007284!7.31e-33!71;UBERON:0004121!1.62e-32!102;UBERON:0000924!1.62e-32!102;UBERON:0006601!1.62e-32!102;UBERON:0001049!3.45e-29!52;UBERON:0005068!3.45e-29!52;UBERON:0006241!3.45e-29!52;UBERON:0007135!3.45e-29!52;UBERON:0000033!7.83e-29!63;UBERON:0000955!1.41e-27!50;UBERON:0006238!1.41e-27!50;UBERON:0002616!9.24e-27!49;UBERON:0003056!1.18e-25!49;UBERON:0002020!5.50e-24!34;UBERON:0003080!3.21e-21!40;UBERON:0002780!2.60e-20!39;UBERON:0001890!2.60e-20!39;UBERON:0006240!2.60e-20!39;UBERON:0002791!1.54e-19!29;UBERON:0003528!1.54e-19!29;UBERON:0001893!1.54e-19!29;UBERON:0007811!4.13e-16!86;UBERON:0000153!2.13e-14!94;UBERON:0000956!1.06e-12!21;UBERON:0001869!1.06e-12!21;UBERON:0000203!1.06e-12!21;UBERON:0002619!8.78e-11!17;UBERON:0003076!2.28e-08!12;UBERON:0003057!2.28e-08!12;UBERON:0002021!2.67e-08!10;UBERON:0000411!2.67e-08!10;UBERON:0001950!2.67e-08!10;UBERON:0002420!3.28e-08!8;UBERON:0007245!3.28e-08!8;UBERON:0010009!3.28e-08!8;UBERON:0010011!3.28e-08!8;UBERON:0000454!3.28e-08!8;UBERON:0002298!5.86e-07!6;UBERON:0000025!6.22e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.31e-45,73;UBERON:0001016,9.20e-44,75;UBERON:0000073,6.48e-43,54;UBERON:0001049,1.30e-38,52;UBERON:0005068,1.30e-38,52;UBERON:0006241,1.30e-38,52;UBERON:0007135,1.30e-38,52;UBERON:0002020,1.22e-34,34;UBERON:0004121,2.17e-34,95;UBERON:0000924,2.17e-34,95;UBERON:0006601,2.17e-34,95;UBERON:0002346,9.04e-32,64;UBERON:0003075,9.04e-32,64;UBERON:0007284,9.04e-32,64;UBERON:0000955,9.61e-30,47;UBERON:0006238,9.61e-30,47;UBERON:0002616,3.17e-28,46;UBERON:0010371,7.77e-27,73;UBERON:0003528,1.66e-25,29;UBERON:0002791,1.66e-25,29;UBERON:0001893,1.66e-25,29;UBERON:0003080,1.43e-23,40;UBERON:0002780,6.51e-22,39;UBERON:0001890,6.51e-22,39;UBERON:0006240,6.51e-22,39;UBERON:0003056,8.73e-20,49;UBERON:0010314,1.37e-19,92;UBERON:0002420,1.14e-16,8;UBERON:0007245,1.14e-16,8;UBERON:0010009,1.14e-16,8;UBERON:0010011,1.14e-16,8;UBERON:0000454,1.14e-16,8;UBERON:0003076,5.58e-16,12;UBERON:0003057,5.58e-16,12;UBERON:0002021,5.70e-14,10;UBERON:0000411,5.70e-14,10;UBERON:0001950,5.70e-14,10;UBERON:0002619,1.88e-13,17;UBERON:0000025,3.29e-13,114;UBERON:0002240,1.01e-12,6;UBERON:0005174,1.01e-12,6;UBERON:0001137,1.01e-12,6;UBERON:0000956,2.60e-12,21;UBERON:0001869,2.60e-12,21;UBERON:0000203,2.60e-12,21;UBERON:0004111,8.11e-12,122;UBERON:0011216,2.71e-11,194;UBERON:0001948,5.68e-11,5;UBERON:0002315,5.68e-11,5;UBERON:0000369,2.78e-10,5;UBERON:0002435,2.78e-10,5;UBERON:0000204,2.78e-10,5;UBERON:0010082,2.78e-10,5;UBERON:0002950,5.15e-10,4;UBERON:0001891,5.15e-10,4;UBERON:0009616,5.15e-10,4;UBERON:0010286,5.15e-10,4;UBERON:0004684,4.85e-08,3;UBERON:0002275,4.85e-08,3;UBERON:0002038,5.11e-08,3;UBERON:0009663,5.11e-08,3;UBERON:0009661,5.11e-08,3;UBERON:0000125,5.11e-08,3;UBERON:0002308,5.11e-08,3;UBERON:0002257,4.45e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.58328969722285,1.1198913730029,2.87505128729943,0,0,0,0,0.286533439938757,0,6.27181028664753,8.99284664762456,6.97214543856797,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.420649922702764,8.2838785477103,6.18431914664518,1.71487118900936,1.72521847832825,0.919218786610021,12.1127469099328,9.83192503255945,9.67721159514334,6.85808696197008,4.57438218012048,5.2091337055676,14.7966989470732,9.56696437053856,9.77908785771585,8.54422897873636,4.9830088279686,3.54158947068071,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,1.46612694769419,0,0,0,0,8.23848516726525,4.11750542536764,2.26177833803156,2.08589184230732,0.255715457330331,5.40248915854856,6.32740925964255,0,0,0,0.210441855886474,0.390361328888111,0.919608417733892,0.720248519221397,0.150704817835715,0.612328492361951,0.896796041993948,0.843315521037559,1.29351685369508,0.431135985865684,0,0.175951124163949,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.10289948564127,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,5.86058432961016,0,0,0,0,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,2.89189184779626,1.13552068166615,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0,0,0.535106452806212,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.836353184057875,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,2.25900737046827,5.52390283808612,2.86447756719698,1.71853182343688,2.74033007908257,0.755393897389701,1.35004500046361,3.15224842256954,1.81256963593682,4.14208249401456,0.518936737920883,0,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0.565879024158229,0.187283014939765,0.0640251524048693,0.34461281373368,0,0.811190281613988,0,0.412085900803307,0.294397840268795,0.342869252385415,0,0.476872379894642,0.290692833264657,0.658765662907314,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0,0.749431733813838,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0 | |||
|short_description=p14@Bcat1 | |||
}} |
Revision as of 09:20, 14 September 2013
Short description: | p14@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Bcat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000032402, ENSMUST00000087468, NM_001024468, uc009eqs.2_5end |
EntrezGene: | Bcat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.44e-31 | 23 |
neuroblast (sensu Vertebrata) | 5.44e-31 | 23 |
neuron | 4.81e-20 | 33 |
neuronal stem cell | 4.81e-20 | 33 |
neuroblast | 4.81e-20 | 33 |
electrically signaling cell | 4.81e-20 | 33 |
neural cell | 1.73e-17 | 43 |
ectodermal cell | 5.77e-17 | 44 |
neurectodermal cell | 5.77e-17 | 44 |
electrically responsive cell | 3.49e-16 | 39 |
electrically active cell | 3.49e-16 | 39 |
embryonic cell | 1.09e-08 | 70 |
raphe nuclei neuron | 4.85e-08 | 3 |
neuron of the substantia nigra | 5.11e-08 | 3 |
granule cell | 1.62e-07 | 3 |
neuron of the ventral spinal cord | 4.45e-07 | 3 |
striatum neuron | 4.67e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.