FFCP PHASE1:Mm9::chr6:30753917..30753929,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:30753917..30753929,+|id=chr6:30753917..30753929,+|ontology_enrichment_celltype=CL:0000117!1.57e-14!23;CL:0000337!1.57e-14!23;CL:0000540!2.45e-08!33;CL:0000047!2.45e-08!33;CL:0000031!2.45e-08!33;CL:0000404!2.45e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-14,23;CL:0000337,1.52e-14,23;CL:0002610,1.61e-10,3;CL:0002614,5.46e-10,3;CL:0000540,1.66e-09,33;CL:0000047,1.66e-09,33;CL:0000031,1.66e-09,33;CL:0000404,1.66e-09,33;CL:0000393,9.92e-08,39;CL:0000211,9.92e-08,39;CL:0002319,8.00e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.26e-20!52;UBERON:0005068!1.26e-20!52;UBERON:0006241!1.26e-20!52;UBERON:0007135!1.26e-20!52;UBERON:0002020!2.28e-20!34;UBERON:0002616!7.80e-20!49;UBERON:0000955!3.29e-19!50;UBERON:0006238!3.29e-19!50;UBERON:0000033!6.34e-18!63;UBERON:0002791!2.03e-17!29;UBERON:0003528!2.03e-17!29;UBERON:0001893!2.03e-17!29;UBERON:0001017!4.35e-17!73;UBERON:0005743!4.35e-17!73;UBERON:0002346!1.50e-16!71;UBERON:0003075!1.50e-16!71;UBERON:0007284!1.50e-16!71;UBERON:0000073!2.78e-16!75;UBERON:0001016!2.78e-16!75;UBERON:0003056!2.06e-15!49;UBERON:0003080!1.08e-14!40;UBERON:0002780!9.17e-14!39;UBERON:0001890!9.17e-14!39;UBERON:0006240!9.17e-14!39;UBERON:0004121!7.19e-13!102;UBERON:0000924!7.19e-13!102;UBERON:0006601!7.19e-13!102;UBERON:0000025!5.12e-11!114;UBERON:0007811!1.29e-10!86;UBERON:0002021!1.79e-10!10;UBERON:0000411!1.79e-10!10;UBERON:0001950!1.79e-10!10;UBERON:0000956!5.14e-10!21;UBERON:0001869!5.14e-10!21;UBERON:0000203!5.14e-10!21;UBERON:0000153!1.88e-09!94;UBERON:0004111!2.13e-09!122;UBERON:0002420!2.55e-09!8;UBERON:0007245!2.55e-09!8;UBERON:0010009!2.55e-09!8;UBERON:0010011!2.55e-09!8;UBERON:0000454!2.55e-09!8;UBERON:0002619!7.75e-09!17;UBERON:0002298!3.90e-08!6;UBERON:0003076!9.79e-07!12;UBERON:0003057!9.79e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.19e-32,54;UBERON:0001049,9.34e-28,52;UBERON:0005068,9.34e-28,52;UBERON:0006241,9.34e-28,52;UBERON:0007135,9.34e-28,52;UBERON:0001017,6.63e-27,73;UBERON:0001016,4.66e-26,75;UBERON:0002020,1.02e-23,34;UBERON:0002616,2.28e-23,46;UBERON:0000955,8.75e-23,47;UBERON:0006238,8.75e-23,47;UBERON:0003080,7.34e-22,40;UBERON:0002346,1.05e-21,64;UBERON:0003075,1.05e-21,64;UBERON:0007284,1.05e-21,64;UBERON:0003528,1.59e-21,29;UBERON:0002791,1.59e-21,29;UBERON:0001893,1.59e-21,29;UBERON:0002021,2.53e-20,10;UBERON:0000411,2.53e-20,10;UBERON:0001950,2.53e-20,10;UBERON:0002780,6.85e-20,39;UBERON:0001890,6.85e-20,39;UBERON:0006240,6.85e-20,39;UBERON:0004121,1.53e-19,95;UBERON:0000924,1.53e-19,95;UBERON:0006601,1.53e-19,95;UBERON:0010371,1.82e-18,73;UBERON:0003056,3.69e-17,49;UBERON:0002619,3.07e-14,17;UBERON:0010314,1.05e-13,92;UBERON:0002420,6.61e-13,8;UBERON:0007245,6.61e-13,8;UBERON:0010009,6.61e-13,8;UBERON:0010011,6.61e-13,8;UBERON:0000454,6.61e-13,8;UBERON:0002950,9.44e-13,4;UBERON:0001891,9.44e-13,4;UBERON:0009616,9.44e-13,4;UBERON:0010286,9.44e-13,4;UBERON:0000025,2.43e-11,114;UBERON:0000956,3.18e-11,21;UBERON:0001869,3.18e-11,21;UBERON:0000203,3.18e-11,21;UBERON:0004684,1.61e-10,3;UBERON:0002275,1.61e-10,3;UBERON:0004111,2.77e-10,122;UBERON:0002038,5.46e-10,3;UBERON:0009663,5.46e-10,3;UBERON:0009661,5.46e-10,3;UBERON:0000125,5.46e-10,3;UBERON:0002308,5.46e-10,3;UBERON:0011216,8.07e-08,194;UBERON:0001896,3.72e-07,2;UBERON:0002298,3.72e-07,2;UBERON:0005290,3.72e-07,2;UBERON:0010096,3.72e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0.244981598429908,0.191690942036473,0,2.20231761998777,2.42605942361857,4.6081959976873,0.395658863190582,1.28082701043374,1.04182674111352,1.3959149950069,1.12552522006336,6.41752640662602,7.95497180778903,2.56269025438385,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.64769703345305,0.457500602818626,1.00523481690292,0.521472960576829,0.767146371990992,1.66230435647648,1.29793010454206,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,1.13195073617213,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.630540576424764,0.44292937929755,0.637819074629948,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0,1.76605648986571,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:30753917..30753929,+ | |||
|id=chr6:30753917..30753929,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.57e-14!23;CL:0000337!1.57e-14!23;CL:0000540!2.45e-08!33;CL:0000047!2.45e-08!33;CL:0000031!2.45e-08!33;CL:0000404!2.45e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.52e-14,23;CL:0000337,1.52e-14,23;CL:0002610,1.61e-10,3;CL:0002614,5.46e-10,3;CL:0000540,1.66e-09,33;CL:0000047,1.66e-09,33;CL:0000031,1.66e-09,33;CL:0000404,1.66e-09,33;CL:0000393,9.92e-08,39;CL:0000211,9.92e-08,39;CL:0002319,8.00e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-20!52;UBERON:0005068!1.26e-20!52;UBERON:0006241!1.26e-20!52;UBERON:0007135!1.26e-20!52;UBERON:0002020!2.28e-20!34;UBERON:0002616!7.80e-20!49;UBERON:0000955!3.29e-19!50;UBERON:0006238!3.29e-19!50;UBERON:0000033!6.34e-18!63;UBERON:0002791!2.03e-17!29;UBERON:0003528!2.03e-17!29;UBERON:0001893!2.03e-17!29;UBERON:0001017!4.35e-17!73;UBERON:0005743!4.35e-17!73;UBERON:0002346!1.50e-16!71;UBERON:0003075!1.50e-16!71;UBERON:0007284!1.50e-16!71;UBERON:0000073!2.78e-16!75;UBERON:0001016!2.78e-16!75;UBERON:0003056!2.06e-15!49;UBERON:0003080!1.08e-14!40;UBERON:0002780!9.17e-14!39;UBERON:0001890!9.17e-14!39;UBERON:0006240!9.17e-14!39;UBERON:0004121!7.19e-13!102;UBERON:0000924!7.19e-13!102;UBERON:0006601!7.19e-13!102;UBERON:0000025!5.12e-11!114;UBERON:0007811!1.29e-10!86;UBERON:0002021!1.79e-10!10;UBERON:0000411!1.79e-10!10;UBERON:0001950!1.79e-10!10;UBERON:0000956!5.14e-10!21;UBERON:0001869!5.14e-10!21;UBERON:0000203!5.14e-10!21;UBERON:0000153!1.88e-09!94;UBERON:0004111!2.13e-09!122;UBERON:0002420!2.55e-09!8;UBERON:0007245!2.55e-09!8;UBERON:0010009!2.55e-09!8;UBERON:0010011!2.55e-09!8;UBERON:0000454!2.55e-09!8;UBERON:0002619!7.75e-09!17;UBERON:0002298!3.90e-08!6;UBERON:0003076!9.79e-07!12;UBERON:0003057!9.79e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.19e-32,54;UBERON:0001049,9.34e-28,52;UBERON:0005068,9.34e-28,52;UBERON:0006241,9.34e-28,52;UBERON:0007135,9.34e-28,52;UBERON:0001017,6.63e-27,73;UBERON:0001016,4.66e-26,75;UBERON:0002020,1.02e-23,34;UBERON:0002616,2.28e-23,46;UBERON:0000955,8.75e-23,47;UBERON:0006238,8.75e-23,47;UBERON:0003080,7.34e-22,40;UBERON:0002346,1.05e-21,64;UBERON:0003075,1.05e-21,64;UBERON:0007284,1.05e-21,64;UBERON:0003528,1.59e-21,29;UBERON:0002791,1.59e-21,29;UBERON:0001893,1.59e-21,29;UBERON:0002021,2.53e-20,10;UBERON:0000411,2.53e-20,10;UBERON:0001950,2.53e-20,10;UBERON:0002780,6.85e-20,39;UBERON:0001890,6.85e-20,39;UBERON:0006240,6.85e-20,39;UBERON:0004121,1.53e-19,95;UBERON:0000924,1.53e-19,95;UBERON:0006601,1.53e-19,95;UBERON:0010371,1.82e-18,73;UBERON:0003056,3.69e-17,49;UBERON:0002619,3.07e-14,17;UBERON:0010314,1.05e-13,92;UBERON:0002420,6.61e-13,8;UBERON:0007245,6.61e-13,8;UBERON:0010009,6.61e-13,8;UBERON:0010011,6.61e-13,8;UBERON:0000454,6.61e-13,8;UBERON:0002950,9.44e-13,4;UBERON:0001891,9.44e-13,4;UBERON:0009616,9.44e-13,4;UBERON:0010286,9.44e-13,4;UBERON:0000025,2.43e-11,114;UBERON:0000956,3.18e-11,21;UBERON:0001869,3.18e-11,21;UBERON:0000203,3.18e-11,21;UBERON:0004684,1.61e-10,3;UBERON:0002275,1.61e-10,3;UBERON:0004111,2.77e-10,122;UBERON:0002038,5.46e-10,3;UBERON:0009663,5.46e-10,3;UBERON:0009661,5.46e-10,3;UBERON:0000125,5.46e-10,3;UBERON:0002308,5.46e-10,3;UBERON:0011216,8.07e-08,194;UBERON:0001896,3.72e-07,2;UBERON:0002298,3.72e-07,2;UBERON:0005290,3.72e-07,2;UBERON:0010096,3.72e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0.244981598429908,0.191690942036473,0,2.20231761998777,2.42605942361857,4.6081959976873,0.395658863190582,1.28082701043374,1.04182674111352,1.3959149950069,1.12552522006336,6.41752640662602,7.95497180778903,2.56269025438385,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.64769703345305,0.457500602818626,1.00523481690292,0.521472960576829,0.767146371990992,1.66230435647648,1.29793010454206,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0,1.13195073617213,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.630540576424764,0.44292937929755,0.637819074629948,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0,1.76605648986571,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,5.52390283808612,5.15605962095457,5.32744865265431,0,4.5323633843382,0.675022500231806,3.15224842256954,1.81256963593682,1.55328093525546,0,0,0,0.486213434136588,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0,1.02860775715625,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.73171189149109,0,0.271608227691724,0.561142271657738,0,0.492522411877817,0.409231043169689,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr6:30753917..30753929,+ | |||
}} |
Revision as of 09:37, 14 September 2013
Short description: | p@chr6:30753917..30753929, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30753917..30753929, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.52e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-14 | 23 |
raphe nuclei neuron | 1.61e-10 | 3 |
neuron of the substantia nigra | 5.46e-10 | 3 |
neuron | 1.66e-09 | 33 |
neuronal stem cell | 1.66e-09 | 33 |
neuroblast | 1.66e-09 | 33 |
electrically signaling cell | 1.66e-09 | 33 |
electrically responsive cell | 9.92e-08 | 39 |
electrically active cell | 9.92e-08 | 39 |
neural cell | 8.00e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.