FFCP PHASE1:Mm9::chr6:30754900..30754914,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=145|UniProt=|association_with_transcript=116bp_to_uc009bfw.1_5end|description=CAGE_peak_7_at_uc009bfw.1_5end|id=chr6:30754900..30754914,+|ontology_enrichment_celltype=CL:0000117!2.25e-13!23;CL:0000337!2.25e-13!23;CL:0000540!1.08e-07!33;CL:0000047!1.08e-07!33;CL:0000031!1.08e-07!33;CL:0000404!1.08e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.26e-20,23;CL:0000337,3.26e-20,23;CL:0000540,6.53e-13,33;CL:0000047,6.53e-13,33;CL:0000031,6.53e-13,33;CL:0000404,6.53e-13,33;CL:0000393,2.41e-10,39;CL:0000211,2.41e-10,39;CL:0002319,4.86e-09,43;CL:0000221,9.44e-09,44;CL:0000133,9.44e-09,44;CL:0002610,5.55e-08,3;CL:0002612,2.19e-07,3;CL:0002614,7.01e-07,3;CL:0002613,9.76e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.45e-20!52;UBERON:0005068!3.45e-20!52;UBERON:0006241!3.45e-20!52;UBERON:0007135!3.45e-20!52;UBERON:0002020!3.67e-19!34;UBERON:0000955!7.15e-19!50;UBERON:0006238!7.15e-19!50;UBERON:0002616!2.75e-18!49;UBERON:0001017!5.98e-18!73;UBERON:0005743!5.98e-18!73;UBERON:0002346!8.21e-18!71;UBERON:0003075!8.21e-18!71;UBERON:0007284!8.21e-18!71;UBERON:0000033!3.95e-17!63;UBERON:0000073!5.70e-17!75;UBERON:0001016!5.70e-17!75;UBERON:0002791!2.19e-15!29;UBERON:0003528!2.19e-15!29;UBERON:0001893!2.19e-15!29;UBERON:0003056!5.00e-15!49;UBERON:0003080!1.71e-14!40;UBERON:0004121!1.89e-14!102;UBERON:0000924!1.89e-14!102;UBERON:0006601!1.89e-14!102;UBERON:0002780!9.78e-14!39;UBERON:0001890!9.78e-14!39;UBERON:0006240!9.78e-14!39;UBERON:0000025!3.81e-11!114;UBERON:0002021!1.34e-10!10;UBERON:0000411!1.34e-10!10;UBERON:0001950!1.34e-10!10;UBERON:0000956!1.71e-09!21;UBERON:0001869!1.71e-09!21;UBERON:0000203!1.71e-09!21;UBERON:0004111!3.61e-09!122;UBERON:0007811!2.22e-08!86;UBERON:0002619!4.65e-08!17;UBERON:0002420!1.66e-07!8;UBERON:0007245!1.66e-07!8;UBERON:0010009!1.66e-07!8;UBERON:0010011!1.66e-07!8;UBERON:0000454!1.66e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.81e-33,54;UBERON:0001017,4.51e-30,73;UBERON:0001049,1.02e-29,52;UBERON:0005068,1.02e-29,52;UBERON:0006241,1.02e-29,52;UBERON:0007135,1.02e-29,52;UBERON:0002020,1.10e-29,34;UBERON:0001016,4.69e-29,75;UBERON:0002346,1.48e-24,64;UBERON:0003075,1.48e-24,64;UBERON:0007284,1.48e-24,64;UBERON:0003528,1.16e-23,29;UBERON:0002791,1.16e-23,29;UBERON:0001893,1.16e-23,29;UBERON:0004121,1.09e-22,95;UBERON:0000924,1.09e-22,95;UBERON:0006601,1.09e-22,95;UBERON:0002021,1.27e-22,10;UBERON:0000411,1.27e-22,10;UBERON:0001950,1.27e-22,10;UBERON:0002616,2.12e-22,46;UBERON:0003080,5.13e-22,40;UBERON:0000955,8.57e-22,47;UBERON:0006238,8.57e-22,47;UBERON:0010371,1.26e-20,73;UBERON:0002780,1.84e-20,39;UBERON:0001890,1.84e-20,39;UBERON:0006240,1.84e-20,39;UBERON:0003056,1.28e-18,49;UBERON:0002420,2.02e-15,8;UBERON:0007245,2.02e-15,8;UBERON:0010009,2.02e-15,8;UBERON:0010011,2.02e-15,8;UBERON:0000454,2.02e-15,8;UBERON:0010314,7.27e-15,92;UBERON:0002619,7.42e-15,17;UBERON:0000025,1.28e-11,114;UBERON:0000956,1.57e-11,21;UBERON:0001869,1.57e-11,21;UBERON:0000203,1.57e-11,21;UBERON:0004111,2.24e-10,122;UBERON:0000369,4.01e-10,5;UBERON:0002435,4.01e-10,5;UBERON:0000204,4.01e-10,5;UBERON:0010082,4.01e-10,5;UBERON:0002240,4.02e-09,6;UBERON:0005174,4.02e-09,6;UBERON:0001137,4.02e-09,6;UBERON:0002950,9.06e-09,4;UBERON:0001891,9.06e-09,4;UBERON:0009616,9.06e-09,4;UBERON:0010286,9.06e-09,4;UBERON:0003076,4.60e-08,12;UBERON:0003057,4.60e-08,12;UBERON:0004684,5.55e-08,3;UBERON:0002275,5.55e-08,3;UBERON:0011216,1.26e-07,194;UBERON:0002257,2.19e-07,3;UBERON:0001948,2.97e-07,5;UBERON:0002315,2.97e-07,5;UBERON:0002038,7.01e-07,3;UBERON:0009663,7.01e-07,3;UBERON:0009661,7.01e-07,3;UBERON:0000125,7.01e-07,3;UBERON:0002308,7.01e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,1.99955689082663,0.441737081903227,0.367472397644862,0,0,15.4162233399144,8.81042632787795,13.6709814598057,1.45074916503213,2.8361169516747,2.6045668527838,1.67509799400829,1.68828783009504,12.071061574368,20.3293723976831,12.5287079103211,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0,0,0,3.14560342750128,1.83000241127451,2.1361239859187,0.869121600961382,2.30143911597297,2.90903262383384,2.92034273521964,0,0,0,0,0,0,0.180062129805349,0.452114453507145,0.408218994907967,0.384341160854549,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0,0.630869845692382,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.350679099451593,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.549122826376163,2.87536413054709,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0.335012514883631,0,1.17080188714679,0.945810864637146,0.221464689648775,0.956728611944923,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,1.9266070798535,3.7507739709505,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,14.6835479080437,15.651058041244,16.0410743763031,6.35856774671644,4.11049511862385,10.5755145634558,10.8003600037089,7.20513925158753,12.6879874515577,15.0150490408028,0.103787347584177,0,0,0.729320151204882,0.209613162627982,0,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0,0.37456602987953,0.448176066834085,0.34461281373368,0.952587382566147,0.695305955669133,0.192909220463705,0,0.588795680537589,1.71434626192708,1.06485483695602,0.715308569841963,0.290692833264657,0.376437521661322,0.338458431566706,0.548783918618318,1.05227884575137,0.679020569229309,1.12228454331548,0.711810108745045,0.591026894253381,0.818462086339379,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p7@uc009bfw.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt= | |||
|association_with_transcript=116bp_to_uc009bfw.1_5end | |||
|description=CAGE_peak_7_at_uc009bfw.1_5end | |||
|id=chr6:30754900..30754914,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.25e-13!23;CL:0000337!2.25e-13!23;CL:0000540!1.08e-07!33;CL:0000047!1.08e-07!33;CL:0000031!1.08e-07!33;CL:0000404!1.08e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.26e-20,23;CL:0000337,3.26e-20,23;CL:0000540,6.53e-13,33;CL:0000047,6.53e-13,33;CL:0000031,6.53e-13,33;CL:0000404,6.53e-13,33;CL:0000393,2.41e-10,39;CL:0000211,2.41e-10,39;CL:0002319,4.86e-09,43;CL:0000221,9.44e-09,44;CL:0000133,9.44e-09,44;CL:0002610,5.55e-08,3;CL:0002612,2.19e-07,3;CL:0002614,7.01e-07,3;CL:0002613,9.76e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.45e-20!52;UBERON:0005068!3.45e-20!52;UBERON:0006241!3.45e-20!52;UBERON:0007135!3.45e-20!52;UBERON:0002020!3.67e-19!34;UBERON:0000955!7.15e-19!50;UBERON:0006238!7.15e-19!50;UBERON:0002616!2.75e-18!49;UBERON:0001017!5.98e-18!73;UBERON:0005743!5.98e-18!73;UBERON:0002346!8.21e-18!71;UBERON:0003075!8.21e-18!71;UBERON:0007284!8.21e-18!71;UBERON:0000033!3.95e-17!63;UBERON:0000073!5.70e-17!75;UBERON:0001016!5.70e-17!75;UBERON:0002791!2.19e-15!29;UBERON:0003528!2.19e-15!29;UBERON:0001893!2.19e-15!29;UBERON:0003056!5.00e-15!49;UBERON:0003080!1.71e-14!40;UBERON:0004121!1.89e-14!102;UBERON:0000924!1.89e-14!102;UBERON:0006601!1.89e-14!102;UBERON:0002780!9.78e-14!39;UBERON:0001890!9.78e-14!39;UBERON:0006240!9.78e-14!39;UBERON:0000025!3.81e-11!114;UBERON:0002021!1.34e-10!10;UBERON:0000411!1.34e-10!10;UBERON:0001950!1.34e-10!10;UBERON:0000956!1.71e-09!21;UBERON:0001869!1.71e-09!21;UBERON:0000203!1.71e-09!21;UBERON:0004111!3.61e-09!122;UBERON:0007811!2.22e-08!86;UBERON:0002619!4.65e-08!17;UBERON:0002420!1.66e-07!8;UBERON:0007245!1.66e-07!8;UBERON:0010009!1.66e-07!8;UBERON:0010011!1.66e-07!8;UBERON:0000454!1.66e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.81e-33,54;UBERON:0001017,4.51e-30,73;UBERON:0001049,1.02e-29,52;UBERON:0005068,1.02e-29,52;UBERON:0006241,1.02e-29,52;UBERON:0007135,1.02e-29,52;UBERON:0002020,1.10e-29,34;UBERON:0001016,4.69e-29,75;UBERON:0002346,1.48e-24,64;UBERON:0003075,1.48e-24,64;UBERON:0007284,1.48e-24,64;UBERON:0003528,1.16e-23,29;UBERON:0002791,1.16e-23,29;UBERON:0001893,1.16e-23,29;UBERON:0004121,1.09e-22,95;UBERON:0000924,1.09e-22,95;UBERON:0006601,1.09e-22,95;UBERON:0002021,1.27e-22,10;UBERON:0000411,1.27e-22,10;UBERON:0001950,1.27e-22,10;UBERON:0002616,2.12e-22,46;UBERON:0003080,5.13e-22,40;UBERON:0000955,8.57e-22,47;UBERON:0006238,8.57e-22,47;UBERON:0010371,1.26e-20,73;UBERON:0002780,1.84e-20,39;UBERON:0001890,1.84e-20,39;UBERON:0006240,1.84e-20,39;UBERON:0003056,1.28e-18,49;UBERON:0002420,2.02e-15,8;UBERON:0007245,2.02e-15,8;UBERON:0010009,2.02e-15,8;UBERON:0010011,2.02e-15,8;UBERON:0000454,2.02e-15,8;UBERON:0010314,7.27e-15,92;UBERON:0002619,7.42e-15,17;UBERON:0000025,1.28e-11,114;UBERON:0000956,1.57e-11,21;UBERON:0001869,1.57e-11,21;UBERON:0000203,1.57e-11,21;UBERON:0004111,2.24e-10,122;UBERON:0000369,4.01e-10,5;UBERON:0002435,4.01e-10,5;UBERON:0000204,4.01e-10,5;UBERON:0010082,4.01e-10,5;UBERON:0002240,4.02e-09,6;UBERON:0005174,4.02e-09,6;UBERON:0001137,4.02e-09,6;UBERON:0002950,9.06e-09,4;UBERON:0001891,9.06e-09,4;UBERON:0009616,9.06e-09,4;UBERON:0010286,9.06e-09,4;UBERON:0003076,4.60e-08,12;UBERON:0003057,4.60e-08,12;UBERON:0004684,5.55e-08,3;UBERON:0002275,5.55e-08,3;UBERON:0011216,1.26e-07,194;UBERON:0002257,2.19e-07,3;UBERON:0001948,2.97e-07,5;UBERON:0002315,2.97e-07,5;UBERON:0002038,7.01e-07,3;UBERON:0009663,7.01e-07,3;UBERON:0009661,7.01e-07,3;UBERON:0000125,7.01e-07,3;UBERON:0002308,7.01e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,1.99955689082663,0.441737081903227,0.367472397644862,0,0,15.4162233399144,8.81042632787795,13.6709814598057,1.45074916503213,2.8361169516747,2.6045668527838,1.67509799400829,1.68828783009504,12.071061574368,20.3293723976831,12.5287079103211,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0,0,0,3.14560342750128,1.83000241127451,2.1361239859187,0.869121600961382,2.30143911597297,2.90903262383384,2.92034273521964,0,0,0,0,0,0,0.180062129805349,0.452114453507145,0.408218994907967,0.384341160854549,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0,0,0.630869845692382,2.36680608472354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.350679099451593,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.549122826376163,2.87536413054709,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0.335012514883631,0,1.17080188714679,0.945810864637146,0.221464689648775,0.956728611944923,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,1.9266070798535,3.7507739709505,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,14.6835479080437,15.651058041244,16.0410743763031,6.35856774671644,4.11049511862385,10.5755145634558,10.8003600037089,7.20513925158753,12.6879874515577,15.0150490408028,0.103787347584177,0,0,0.729320151204882,0.209613162627982,0,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0,0.37456602987953,0.448176066834085,0.34461281373368,0.952587382566147,0.695305955669133,0.192909220463705,0,0.588795680537589,1.71434626192708,1.06485483695602,0.715308569841963,0.290692833264657,0.376437521661322,0.338458431566706,0.548783918618318,1.05227884575137,0.679020569229309,1.12228454331548,0.711810108745045,0.591026894253381,0.818462086339379,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p7@uc009bfw.1 | |||
}} |
Revision as of 09:37, 14 September 2013
Short description: | p7@uc009bfw.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_uc009bfw.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | 116bp_to_uc009bfw.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.26e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.26e-20 | 23 |
neuron | 6.53e-13 | 33 |
neuronal stem cell | 6.53e-13 | 33 |
neuroblast | 6.53e-13 | 33 |
electrically signaling cell | 6.53e-13 | 33 |
electrically responsive cell | 2.41e-10 | 39 |
electrically active cell | 2.41e-10 | 39 |
neural cell | 4.86e-09 | 43 |
ectodermal cell | 9.44e-09 | 44 |
neurectodermal cell | 9.44e-09 | 44 |
raphe nuclei neuron | 5.55e-08 | 3 |
neuron of the ventral spinal cord | 2.19e-07 | 3 |
neuron of the substantia nigra | 7.01e-07 | 3 |
striatum neuron | 9.76e-07 | 3 |
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