FFCP PHASE1:Mm9::chr6:39369941..39369957,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54484|HGNC=|MCL_coexpression_id=742|UniProt=Q9DB86|association_with_transcript=0bp_to_ENSMUST00000170431,uc009bls.1_5end|description=CAGE_peak_6_at_Mkrn1_5end|id=chr6:39369941..39369957,-|ontology_enrichment_celltype=CL:0000117!1.03e-09!23;CL:0000337!1.03e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.82e-17,23;CL:0000337,7.82e-17,23;CL:0000540,3.15e-10,33;CL:0000047,3.15e-10,33;CL:0000031,3.15e-10,33;CL:0000404,3.15e-10,33;CL:0000393,6.14e-08,39;CL:0000211,6.14e-08,39;CL:0002319,8.71e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.72e-14!73;UBERON:0005743!7.72e-14!73;UBERON:0000073!2.09e-13!75;UBERON:0001016!2.09e-13!75;UBERON:0001049!2.30e-13!52;UBERON:0005068!2.30e-13!52;UBERON:0006241!2.30e-13!52;UBERON:0007135!2.30e-13!52;UBERON:0002020!1.77e-12!34;UBERON:0000033!2.13e-12!63;UBERON:0000955!6.94e-12!50;UBERON:0006238!6.94e-12!50;UBERON:0002346!1.35e-11!71;UBERON:0003075!1.35e-11!71;UBERON:0007284!1.35e-11!71;UBERON:0002616!1.97e-11!49;UBERON:0004121!1.69e-10!102;UBERON:0000924!1.69e-10!102;UBERON:0006601!1.69e-10!102;UBERON:0003056!6.41e-10!49;UBERON:0002791!2.90e-09!29;UBERON:0003528!2.90e-09!29;UBERON:0001893!2.90e-09!29;UBERON:0003080!1.17e-08!40;UBERON:0002780!3.97e-08!39;UBERON:0001890!3.97e-08!39;UBERON:0006240!3.97e-08!39;UBERON:0002021!9.53e-07!10;UBERON:0000411!9.53e-07!10;UBERON:0001950!9.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-26,54;UBERON:0001049,8.77e-24,52;UBERON:0005068,8.77e-24,52;UBERON:0006241,8.77e-24,52;UBERON:0007135,8.77e-24,52;UBERON:0001017,9.07e-24,73;UBERON:0001016,7.82e-23,75;UBERON:0002020,2.39e-20,34;UBERON:0002346,1.07e-18,64;UBERON:0003075,1.07e-18,64;UBERON:0007284,1.07e-18,64;UBERON:0000955,3.41e-17,47;UBERON:0006238,3.41e-17,47;UBERON:0004121,1.28e-16,95;UBERON:0000924,1.28e-16,95;UBERON:0006601,1.28e-16,95;UBERON:0002616,2.67e-16,46;UBERON:0010371,3.27e-15,73;UBERON:0003528,7.59e-14,29;UBERON:0002791,7.59e-14,29;UBERON:0001893,7.59e-14,29;UBERON:0003076,1.61e-13,12;UBERON:0003057,1.61e-13,12;UBERON:0002021,5.54e-13,10;UBERON:0000411,5.54e-13,10;UBERON:0001950,5.54e-13,10;UBERON:0003080,9.61e-13,40;UBERON:0002780,1.04e-11,39;UBERON:0001890,1.04e-11,39;UBERON:0006240,1.04e-11,39;UBERON:0002240,1.15e-10,6;UBERON:0005174,1.15e-10,6;UBERON:0001137,1.15e-10,6;UBERON:0003056,3.18e-10,49;UBERON:0010314,3.61e-10,92;UBERON:0001948,4.12e-09,5;UBERON:0002315,4.12e-09,5;UBERON:0002420,8.64e-09,8;UBERON:0007245,8.64e-09,8;UBERON:0010009,8.64e-09,8;UBERON:0010011,8.64e-09,8;UBERON:0000454,8.64e-09,8;UBERON:0002619,4.43e-08,17;UBERON:0000025,6.48e-08,114;UBERON:0002950,1.71e-07,4;UBERON:0001891,1.71e-07,4;UBERON:0009616,1.71e-07,4;UBERON:0010286,1.71e-07,4;UBERON:0000956,2.30e-07,21;UBERON:0001869,2.30e-07,21;UBERON:0000203,2.30e-07,21;UBERON:0004111,8.18e-07,122|phase1_expression=0.480446541314382,3.14077866875425,0.909998478779072,0,2.00358291978539,0.33575854382378,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,1.19060606211498,0,0,1.27993938234725,1.37645568640302,4.59385571292016,1.29228598847722,1.50829862880122,1.90023419456374,0.756090389279792,1.77384408524244,0,0,0,0,0.166234645358492,0,0.837063261473815,1.5626706890476,0,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.672187598284928,0,0,0,3.43937983461316,1.05798195854407,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,9.14083150092171,10.6016899656774,0.367472397644862,0.191690942036473,0,3.30347642998166,6.89511625660014,5.52983519722476,2.2420668914133,2.47016637726506,2.08365348222704,10.0505879640497,7.31591393041184,4.12555268997387,6.18720029494702,4.9830088279686,4.28718725398191,0.075726193333184,0.151143120213571,0.289864488701678,0,3.39985666853875,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0.441683036920787,0.484875253135222,0,4.68449275218475,9.21565509979202,0.766371165625774,0,0,0,4.6435098215495,1.37250180845588,0.879580464790051,2.43354048269187,1.79000820131231,5.40248915854856,4.2182728397617,0,0.497627882440372,1.51633655060205,0.631325567659422,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.748401490664606,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.47202963994889,0.720332286654991,2.31293148088659,0.793351699990633,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0,0,0,0.2161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| ||
|EntrezGene=54484 | |||
|HGNC= | |||
|MCL_coexpression_id=742 | |||
|UniProt=Q9DB86 | |||
|association_with_transcript=0bp_to_ENSMUST00000170431,uc009bls.1_5end | |||
|description=CAGE_peak_6_at_Mkrn1_5end | |||
|id=chr6:39369941..39369957,- | |||
|ontology_enrichment_celltype=CL:0000117!1.03e-09!23;CL:0000337!1.03e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.82e-17,23;CL:0000337,7.82e-17,23;CL:0000540,3.15e-10,33;CL:0000047,3.15e-10,33;CL:0000031,3.15e-10,33;CL:0000404,3.15e-10,33;CL:0000393,6.14e-08,39;CL:0000211,6.14e-08,39;CL:0002319,8.71e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.72e-14!73;UBERON:0005743!7.72e-14!73;UBERON:0000073!2.09e-13!75;UBERON:0001016!2.09e-13!75;UBERON:0001049!2.30e-13!52;UBERON:0005068!2.30e-13!52;UBERON:0006241!2.30e-13!52;UBERON:0007135!2.30e-13!52;UBERON:0002020!1.77e-12!34;UBERON:0000033!2.13e-12!63;UBERON:0000955!6.94e-12!50;UBERON:0006238!6.94e-12!50;UBERON:0002346!1.35e-11!71;UBERON:0003075!1.35e-11!71;UBERON:0007284!1.35e-11!71;UBERON:0002616!1.97e-11!49;UBERON:0004121!1.69e-10!102;UBERON:0000924!1.69e-10!102;UBERON:0006601!1.69e-10!102;UBERON:0003056!6.41e-10!49;UBERON:0002791!2.90e-09!29;UBERON:0003528!2.90e-09!29;UBERON:0001893!2.90e-09!29;UBERON:0003080!1.17e-08!40;UBERON:0002780!3.97e-08!39;UBERON:0001890!3.97e-08!39;UBERON:0006240!3.97e-08!39;UBERON:0002021!9.53e-07!10;UBERON:0000411!9.53e-07!10;UBERON:0001950!9.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-26,54;UBERON:0001049,8.77e-24,52;UBERON:0005068,8.77e-24,52;UBERON:0006241,8.77e-24,52;UBERON:0007135,8.77e-24,52;UBERON:0001017,9.07e-24,73;UBERON:0001016,7.82e-23,75;UBERON:0002020,2.39e-20,34;UBERON:0002346,1.07e-18,64;UBERON:0003075,1.07e-18,64;UBERON:0007284,1.07e-18,64;UBERON:0000955,3.41e-17,47;UBERON:0006238,3.41e-17,47;UBERON:0004121,1.28e-16,95;UBERON:0000924,1.28e-16,95;UBERON:0006601,1.28e-16,95;UBERON:0002616,2.67e-16,46;UBERON:0010371,3.27e-15,73;UBERON:0003528,7.59e-14,29;UBERON:0002791,7.59e-14,29;UBERON:0001893,7.59e-14,29;UBERON:0003076,1.61e-13,12;UBERON:0003057,1.61e-13,12;UBERON:0002021,5.54e-13,10;UBERON:0000411,5.54e-13,10;UBERON:0001950,5.54e-13,10;UBERON:0003080,9.61e-13,40;UBERON:0002780,1.04e-11,39;UBERON:0001890,1.04e-11,39;UBERON:0006240,1.04e-11,39;UBERON:0002240,1.15e-10,6;UBERON:0005174,1.15e-10,6;UBERON:0001137,1.15e-10,6;UBERON:0003056,3.18e-10,49;UBERON:0010314,3.61e-10,92;UBERON:0001948,4.12e-09,5;UBERON:0002315,4.12e-09,5;UBERON:0002420,8.64e-09,8;UBERON:0007245,8.64e-09,8;UBERON:0010009,8.64e-09,8;UBERON:0010011,8.64e-09,8;UBERON:0000454,8.64e-09,8;UBERON:0002619,4.43e-08,17;UBERON:0000025,6.48e-08,114;UBERON:0002950,1.71e-07,4;UBERON:0001891,1.71e-07,4;UBERON:0009616,1.71e-07,4;UBERON:0010286,1.71e-07,4;UBERON:0000956,2.30e-07,21;UBERON:0001869,2.30e-07,21;UBERON:0000203,2.30e-07,21;UBERON:0004111,8.18e-07,122 | |||
|phase1_expression=0.480446541314382,3.14077866875425,0.909998478779072,0,2.00358291978539,0.33575854382378,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0.0874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,1.19060606211498,0,0,1.27993938234725,1.37645568640302,4.59385571292016,1.29228598847722,1.50829862880122,1.90023419456374,0.756090389279792,1.77384408524244,0,0,0,0,0.166234645358492,0,0.837063261473815,1.5626706890476,0,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.672187598284928,0,0,0,3.43937983461316,1.05798195854407,3.1691570175309,0,0,0,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,9.14083150092171,10.6016899656774,0.367472397644862,0.191690942036473,0,3.30347642998166,6.89511625660014,5.52983519722476,2.2420668914133,2.47016637726506,2.08365348222704,10.0505879640497,7.31591393041184,4.12555268997387,6.18720029494702,4.9830088279686,4.28718725398191,0.075726193333184,0.151143120213571,0.289864488701678,0,3.39985666853875,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0.441683036920787,0.484875253135222,0,4.68449275218475,9.21565509979202,0.766371165625774,0,0,0,4.6435098215495,1.37250180845588,0.879580464790051,2.43354048269187,1.79000820131231,5.40248915854856,4.2182728397617,0,0.497627882440372,1.51633655060205,0.631325567659422,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,0.748401490664606,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.47202963994889,0.720332286654991,2.31293148088659,0.793351699990633,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0,0,0,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0.786235980452812,0.224862112384854,0,0.72353147925725,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0,0.482443521363367,0.554259570499814,0.189491411770485,0,0,0,0,0,0.390267295715598,0,0.44292937929755,0.318909537314974,0,0.690739927463582,0.433947175744535,1.50791283939272,0,0.491764273019036,0,6.26147300952389,7.501547941901,0,0,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0.790575555893047,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0.23467170806371,0.63549621259146,0.220528398054962,0,0,0,0,0.164140899745061,0.291480836629851,7.41701208042039,0.170870880797853,0.206386867963223,0.185194527369712,1.13021074202815,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0,0.954670618015114,0,0,0.216010681643603,0,0,0,0,0,0.259229946583586,0,2.81846469342095,0,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0,0,1.04859344425711,2.17425708743405,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,3.3885110557024,3.68260189205742,1.14579102687879,3.26521046453006,3.42541259885321,2.2661816921691,4.05013500139084,1.35096360967266,1.81256963593682,3.10656187051092,0.31136204275253,1.19707462020309,0.341467211508268,0.243106717068294,0.838452650511929,0.551530525350042,0.666740183404846,0.618105171716683,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.576226371643824,0.459483751644906,0,0.811190281613988,0.38581844092741,0,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.886540341380071,0.818462086339379,0.619747364743864,0.192906610981141,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,0.441182838239031,0 | |||
|short_description=p6@Mkrn1 | |||
}} |
Revision as of 09:47, 14 September 2013
Short description: | p6@Mkrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mkrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:742 |
Association with transcript: | 0bp_to_ENSMUST00000170431, uc009bls.1_5end |
EntrezGene: | Mkrn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.82e-17 | 23 |
neuroblast (sensu Vertebrata) | 7.82e-17 | 23 |
neuron | 3.15e-10 | 33 |
neuronal stem cell | 3.15e-10 | 33 |
neuroblast | 3.15e-10 | 33 |
electrically signaling cell | 3.15e-10 | 33 |
electrically responsive cell | 6.14e-08 | 39 |
electrically active cell | 6.14e-08 | 39 |
neural cell | 8.71e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.