FFCP PHASE1:Mm9::chr6:91106734..91106759,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232232|HGNC=|MCL_coexpression_id=208|UniProt=Q543U1,Q91WA3|association_with_transcript=-49bp_to_NM_144919,uc009cxv.1_5end|description=CAGE_peak_3_at_Hdac11_5end|id=chr6:91106734..91106759,+|ontology_enrichment_celltype=CL:0000117!7.47e-13!23;CL:0000337!7.47e-13!23;CL:0000540!2.10e-09!33;CL:0000047!2.10e-09!33;CL:0000031!2.10e-09!33;CL:0000404!2.10e-09!33;CL:0000393!1.69e-07!39;CL:0000211!1.69e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-20,23;CL:0000337,2.30e-20,23;CL:0000540,5.49e-13,33;CL:0000047,5.49e-13,33;CL:0000031,5.49e-13,33;CL:0000404,5.49e-13,33;CL:0000393,2.15e-10,39;CL:0000211,2.15e-10,39;CL:0002319,4.48e-09,43;CL:0000221,8.75e-09,44;CL:0000133,8.75e-09,44;CL:0002614,9.12e-08,3;CL:0002610,1.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.73e-21!73;UBERON:0005743!3.73e-21!73;UBERON:0001049!1.16e-20!52;UBERON:0005068!1.16e-20!52;UBERON:0006241!1.16e-20!52;UBERON:0007135!1.16e-20!52;UBERON:0000073!8.99e-20!75;UBERON:0001016!8.99e-20!75;UBERON:0000955!2.32e-19!50;UBERON:0006238!2.32e-19!50;UBERON:0002616!9.75e-19!49;UBERON:0000033!4.65e-17!63;UBERON:0002020!4.04e-16!34;UBERON:0003080!2.16e-15!40;UBERON:0002346!4.82e-15!71;UBERON:0003075!4.82e-15!71;UBERON:0007284!4.82e-15!71;UBERON:0002780!1.18e-14!39;UBERON:0001890!1.18e-14!39;UBERON:0006240!1.18e-14!39;UBERON:0003056!7.07e-14!49;UBERON:0002791!7.61e-13!29;UBERON:0003528!7.61e-13!29;UBERON:0001893!7.61e-13!29;UBERON:0004121!1.08e-12!102;UBERON:0000924!1.08e-12!102;UBERON:0006601!1.08e-12!102;UBERON:0000025!4.19e-11!114;UBERON:0004111!3.20e-10!122;UBERON:0007811!1.48e-08!86;UBERON:0000956!3.75e-08!21;UBERON:0001869!3.75e-08!21;UBERON:0000203!3.75e-08!21;UBERON:0002619!1.22e-07!17;UBERON:0000153!2.72e-07!94;UBERON:0002021!4.08e-07!10;UBERON:0000411!4.08e-07!10;UBERON:0001950!4.08e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.43e-36,54;UBERON:0001017,3.37e-32,73;UBERON:0001049,3.41e-32,52;UBERON:0005068,3.41e-32,52;UBERON:0006241,3.41e-32,52;UBERON:0007135,3.41e-32,52;UBERON:0001016,4.07e-31,75;UBERON:0002346,9.52e-25,64;UBERON:0003075,9.52e-25,64;UBERON:0007284,9.52e-25,64;UBERON:0002020,1.21e-24,34;UBERON:0000955,5.35e-24,47;UBERON:0006238,5.35e-24,47;UBERON:0004121,8.51e-23,95;UBERON:0000924,8.51e-23,95;UBERON:0006601,8.51e-23,95;UBERON:0002616,1.37e-22,46;UBERON:0010371,9.01e-21,73;UBERON:0003080,4.65e-20,40;UBERON:0002780,2.01e-18,39;UBERON:0001890,2.01e-18,39;UBERON:0006240,2.01e-18,39;UBERON:0003528,9.79e-17,29;UBERON:0002791,9.79e-17,29;UBERON:0001893,9.79e-17,29;UBERON:0003056,2.29e-15,49;UBERON:0010314,6.09e-15,92;UBERON:0003076,4.36e-13,12;UBERON:0003057,4.36e-13,12;UBERON:0002240,1.19e-12,6;UBERON:0005174,1.19e-12,6;UBERON:0001137,1.19e-12,6;UBERON:0002021,4.51e-12,10;UBERON:0000411,4.51e-12,10;UBERON:0001950,4.51e-12,10;UBERON:0002420,5.11e-12,8;UBERON:0007245,5.11e-12,8;UBERON:0010009,5.11e-12,8;UBERON:0010011,5.11e-12,8;UBERON:0000454,5.11e-12,8;UBERON:0000025,1.53e-11,114;UBERON:0001948,1.12e-10,5;UBERON:0002315,1.12e-10,5;UBERON:0004111,2.71e-10,122;UBERON:0002950,6.16e-10,4;UBERON:0001891,6.16e-10,4;UBERON:0009616,6.16e-10,4;UBERON:0010286,6.16e-10,4;UBERON:0002619,2.71e-08,17;UBERON:0000956,6.28e-08,21;UBERON:0001869,6.28e-08,21;UBERON:0000203,6.28e-08,21;UBERON:0002038,9.12e-08,3;UBERON:0009663,9.12e-08,3;UBERON:0009661,9.12e-08,3;UBERON:0000125,9.12e-08,3;UBERON:0002308,9.12e-08,3;UBERON:0004684,1.17e-07,3;UBERON:0002275,1.17e-07,3;UBERON:0011216,1.73e-07,194|phase1_expression=0.80074423552397,0,0,0,1.00179145989269,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0,0.42438965179803,5.78294373027274,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,0.809265843438391,1.5869729378161,3.1691570175309,0,0,0,0,0,0,0.768436610643109,0.103689612308478,0.270011876663381,0.420649922702764,4.28476476605705,5.96345060569357,0.61245399607477,0.479227355091182,0.919218786610021,4.40463523997555,4.85211884723713,5.9906547969935,1.71452174049252,1.73826522844578,1.56274011167028,5.02529398202486,4.50210088025344,6.72312290217964,2.06240009831567,1.85083185038834,3.35519002485541,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,1.37020655662872,0.258937883647172,0.445326417194474,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,0,0,0,0.292780797011547,1.67557365450764,0.255457055208591,0.11981512450592,0,0,6.29120685500255,1.83000241127451,0.879580464790051,2.08589184230732,2.30143911597297,5.61027720310812,3.89379031362618,0.203678727700633,0.248813941220186,1.0108910337347,0,0.130120442962704,0.689706313300419,0.180062129805349,0,0.408218994907967,0,0.562210347358373,0.25870337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| ||
|EntrezGene=232232 | |||
|HGNC= | |||
|MCL_coexpression_id=208 | |||
|UniProt=Q543U1,Q91WA3 | |||
|association_with_transcript=-49bp_to_NM_144919,uc009cxv.1_5end | |||
|description=CAGE_peak_3_at_Hdac11_5end | |||
|id=chr6:91106734..91106759,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.47e-13!23;CL:0000337!7.47e-13!23;CL:0000540!2.10e-09!33;CL:0000047!2.10e-09!33;CL:0000031!2.10e-09!33;CL:0000404!2.10e-09!33;CL:0000393!1.69e-07!39;CL:0000211!1.69e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-20,23;CL:0000337,2.30e-20,23;CL:0000540,5.49e-13,33;CL:0000047,5.49e-13,33;CL:0000031,5.49e-13,33;CL:0000404,5.49e-13,33;CL:0000393,2.15e-10,39;CL:0000211,2.15e-10,39;CL:0002319,4.48e-09,43;CL:0000221,8.75e-09,44;CL:0000133,8.75e-09,44;CL:0002614,9.12e-08,3;CL:0002610,1.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.73e-21!73;UBERON:0005743!3.73e-21!73;UBERON:0001049!1.16e-20!52;UBERON:0005068!1.16e-20!52;UBERON:0006241!1.16e-20!52;UBERON:0007135!1.16e-20!52;UBERON:0000073!8.99e-20!75;UBERON:0001016!8.99e-20!75;UBERON:0000955!2.32e-19!50;UBERON:0006238!2.32e-19!50;UBERON:0002616!9.75e-19!49;UBERON:0000033!4.65e-17!63;UBERON:0002020!4.04e-16!34;UBERON:0003080!2.16e-15!40;UBERON:0002346!4.82e-15!71;UBERON:0003075!4.82e-15!71;UBERON:0007284!4.82e-15!71;UBERON:0002780!1.18e-14!39;UBERON:0001890!1.18e-14!39;UBERON:0006240!1.18e-14!39;UBERON:0003056!7.07e-14!49;UBERON:0002791!7.61e-13!29;UBERON:0003528!7.61e-13!29;UBERON:0001893!7.61e-13!29;UBERON:0004121!1.08e-12!102;UBERON:0000924!1.08e-12!102;UBERON:0006601!1.08e-12!102;UBERON:0000025!4.19e-11!114;UBERON:0004111!3.20e-10!122;UBERON:0007811!1.48e-08!86;UBERON:0000956!3.75e-08!21;UBERON:0001869!3.75e-08!21;UBERON:0000203!3.75e-08!21;UBERON:0002619!1.22e-07!17;UBERON:0000153!2.72e-07!94;UBERON:0002021!4.08e-07!10;UBERON:0000411!4.08e-07!10;UBERON:0001950!4.08e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.43e-36,54;UBERON:0001017,3.37e-32,73;UBERON:0001049,3.41e-32,52;UBERON:0005068,3.41e-32,52;UBERON:0006241,3.41e-32,52;UBERON:0007135,3.41e-32,52;UBERON:0001016,4.07e-31,75;UBERON:0002346,9.52e-25,64;UBERON:0003075,9.52e-25,64;UBERON:0007284,9.52e-25,64;UBERON:0002020,1.21e-24,34;UBERON:0000955,5.35e-24,47;UBERON:0006238,5.35e-24,47;UBERON:0004121,8.51e-23,95;UBERON:0000924,8.51e-23,95;UBERON:0006601,8.51e-23,95;UBERON:0002616,1.37e-22,46;UBERON:0010371,9.01e-21,73;UBERON:0003080,4.65e-20,40;UBERON:0002780,2.01e-18,39;UBERON:0001890,2.01e-18,39;UBERON:0006240,2.01e-18,39;UBERON:0003528,9.79e-17,29;UBERON:0002791,9.79e-17,29;UBERON:0001893,9.79e-17,29;UBERON:0003056,2.29e-15,49;UBERON:0010314,6.09e-15,92;UBERON:0003076,4.36e-13,12;UBERON:0003057,4.36e-13,12;UBERON:0002240,1.19e-12,6;UBERON:0005174,1.19e-12,6;UBERON:0001137,1.19e-12,6;UBERON:0002021,4.51e-12,10;UBERON:0000411,4.51e-12,10;UBERON:0001950,4.51e-12,10;UBERON:0002420,5.11e-12,8;UBERON:0007245,5.11e-12,8;UBERON:0010009,5.11e-12,8;UBERON:0010011,5.11e-12,8;UBERON:0000454,5.11e-12,8;UBERON:0000025,1.53e-11,114;UBERON:0001948,1.12e-10,5;UBERON:0002315,1.12e-10,5;UBERON:0004111,2.71e-10,122;UBERON:0002950,6.16e-10,4;UBERON:0001891,6.16e-10,4;UBERON:0009616,6.16e-10,4;UBERON:0010286,6.16e-10,4;UBERON:0002619,2.71e-08,17;UBERON:0000956,6.28e-08,21;UBERON:0001869,6.28e-08,21;UBERON:0000203,6.28e-08,21;UBERON:0002038,9.12e-08,3;UBERON:0009663,9.12e-08,3;UBERON:0009661,9.12e-08,3;UBERON:0000125,9.12e-08,3;UBERON:0002308,9.12e-08,3;UBERON:0004684,1.17e-07,3;UBERON:0002275,1.17e-07,3;UBERON:0011216,1.73e-07,194 | |||
|phase1_expression=0.80074423552397,0,0,0,1.00179145989269,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0,0.42438965179803,5.78294373027274,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,0.809265843438391,1.5869729378161,3.1691570175309,0,0,0,0,0,0,0.768436610643109,0.103689612308478,0.270011876663381,0.420649922702764,4.28476476605705,5.96345060569357,0.61245399607477,0.479227355091182,0.919218786610021,4.40463523997555,4.85211884723713,5.9906547969935,1.71452174049252,1.73826522844578,1.56274011167028,5.02529398202486,4.50210088025344,6.72312290217964,2.06240009831567,1.85083185038834,3.35519002485541,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,1.37020655662872,0.258937883647172,0.445326417194474,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,0,0,0,0.292780797011547,1.67557365450764,0.255457055208591,0.11981512450592,0,0,6.29120685500255,1.83000241127451,0.879580464790051,2.08589184230732,2.30143911597297,5.61027720310812,3.89379031362618,0.203678727700633,0.248813941220186,1.0108910337347,0,0.130120442962704,0.689706313300419,0.180062129805349,0,0.408218994907967,0,0.562210347358373,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.946978942340841,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0.292399974850665,0.439100230582101,0,2.73376933133365,0.308713837137853,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0,0.442655759869801,0.147610147979602,0,0.370191491765402,0.592905254174298,0,0,0.224862112384854,0.405720242777006,0,0.50925170356284,0,0,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0,0,0,0.476087281772027,0,0.157635144106191,0.44292937929755,0,0,0.172684981865896,0.144649058581512,0,0,0,0,3.85321415970701,5.15731421005694,0,0.252470927204373,0,0,0.646270193198397,0,0.668396022247182,0,0,0.876767573733936,0,1.92792789853084,0,0.890328018336276,0,0,0,0.242780636154981,0,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,1.70219802876894,0.36012218806262,0.517434735131018,0,0.709360934569094,0,0.329098041204242,1.2178597964584,0,0,0.441056796109924,0,0,0.120625849856312,0.119372344003136,0,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0,0.279902904647316,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0.129614973291793,0,11.837551712368,0,0.165458490457098,0,0.904118764344118,0.337912250981556,0,0.13020438484395,0.314578033277133,0,12.6733202753461,0,0,0.205421914329655,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,0.572895513439397,2.23409137046794,2.74033007908257,1.5107877947794,6.07520250208625,2.2516060161211,0.906284817968409,4.14208249401456,0.103787347584177,0,0.682934423016537,0.243106717068294,0.628839487883947,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.280924522409647,0.320125762024346,0.114870937911227,0,0.231768651889711,0,0,0.294397840268795,0,0.532427418478012,0.715308569841963,0.290692833264657,0.188218760830661,0.25384382367503,0.73171189149109,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.394017929502254,0,0.154936841185966,0.192906610981141,0.749431733813838,0,0.214871054048298,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p3@Hdac11 | |||
}} |
Revision as of 10:58, 14 September 2013
Short description: | p3@Hdac11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hdac11_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | -49bp_to_NM_144919, uc009cxv.1_5end |
EntrezGene: | Hdac11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.30e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.30e-20 | 23 |
neuron | 5.49e-13 | 33 |
neuronal stem cell | 5.49e-13 | 33 |
neuroblast | 5.49e-13 | 33 |
electrically signaling cell | 5.49e-13 | 33 |
electrically responsive cell | 2.15e-10 | 39 |
electrically active cell | 2.15e-10 | 39 |
neural cell | 4.48e-09 | 43 |
ectodermal cell | 8.75e-09 | 44 |
neurectodermal cell | 8.75e-09 | 44 |
neuron of the substantia nigra | 9.12e-08 | 3 |
raphe nuclei neuron | 1.17e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.