FFCP PHASE1:Mm9::chr6:92041372..92041383,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22026|HGNC=|MCL_coexpression_id=1|UniProt=P49117|association_with_transcript=0bp_to_ENSMUST00000113460_5end|description=CAGE_peak_6_at_Nr2c2_5end|id=chr6:92041372..92041383,+|ontology_enrichment_celltype=CL:0000117!7.38e-12!23;CL:0000337!7.38e-12!23;CL:0000540!1.92e-11!33;CL:0000047!1.92e-11!33;CL:0000031!1.92e-11!33;CL:0000404!1.92e-11!33;CL:0000393!9.25e-10!39;CL:0000211!9.25e-10!39;CL:0000221!8.21e-09!44;CL:0000133!8.21e-09!44;CL:0002319!1.96e-08!43;CL:0000055!6.00e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.22e-28,23;CL:0000337,8.22e-28,23;CL:0000540,7.55e-24,33;CL:0000047,7.55e-24,33;CL:0000031,7.55e-24,33;CL:0000404,7.55e-24,33;CL:0000393,3.16e-19,39;CL:0000211,3.16e-19,39;CL:0002319,7.18e-17,43;CL:0000221,2.39e-16,44;CL:0000133,2.39e-16,44;CL:0002321,4.03e-08,70;CL:0002610,5.74e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.40e-21!73;UBERON:0005743!3.40e-21!73;UBERON:0000073!7.92e-21!75;UBERON:0001016!7.92e-21!75;UBERON:0001049!1.40e-19!52;UBERON:0005068!1.40e-19!52;UBERON:0006241!1.40e-19!52;UBERON:0007135!1.40e-19!52;UBERON:0002346!2.79e-19!71;UBERON:0003075!2.79e-19!71;UBERON:0007284!2.79e-19!71;UBERON:0000955!1.05e-18!50;UBERON:0006238!1.05e-18!50;UBERON:0002616!2.87e-18!49;UBERON:0000033!4.20e-18!63;UBERON:0004121!1.94e-17!102;UBERON:0000924!1.94e-17!102;UBERON:0006601!1.94e-17!102;UBERON:0002020!2.93e-17!34;UBERON:0003056!2.90e-16!49;UBERON:0003080!1.20e-15!40;UBERON:0002780!4.28e-15!39;UBERON:0001890!4.28e-15!39;UBERON:0006240!4.28e-15!39;UBERON:0002791!4.03e-14!29;UBERON:0003528!4.03e-14!29;UBERON:0001893!4.03e-14!29;UBERON:0007811!1.00e-10!86;UBERON:0000153!3.40e-10!94;UBERON:0000956!2.27e-09!21;UBERON:0001869!2.27e-09!21;UBERON:0000203!2.27e-09!21;UBERON:0000025!2.33e-08!114;UBERON:0002619!9.42e-08!17;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10;UBERON:0004111!1.31e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.53e-41,34;UBERON:0000073,1.44e-40,54;UBERON:0001017,8.65e-39,73;UBERON:0001016,1.76e-37,75;UBERON:0001049,1.81e-34,52;UBERON:0005068,1.81e-34,52;UBERON:0006241,1.81e-34,52;UBERON:0007135,1.81e-34,52;UBERON:0002346,7.42e-34,64;UBERON:0003075,7.42e-34,64;UBERON:0007284,7.42e-34,64;UBERON:0003528,6.04e-33,29;UBERON:0002791,6.04e-33,29;UBERON:0001893,6.04e-33,29;UBERON:0004121,1.35e-30,95;UBERON:0000924,1.35e-30,95;UBERON:0006601,1.35e-30,95;UBERON:0003080,1.67e-30,40;UBERON:0002780,4.41e-29,39;UBERON:0001890,4.41e-29,39;UBERON:0006240,4.41e-29,39;UBERON:0010371,1.69e-28,73;UBERON:0002616,1.40e-27,46;UBERON:0003056,2.52e-27,49;UBERON:0000955,7.93e-27,47;UBERON:0006238,7.93e-27,47;UBERON:0010314,1.22e-20,92;UBERON:0000956,4.50e-20,21;UBERON:0001869,4.50e-20,21;UBERON:0000203,4.50e-20,21;UBERON:0002021,1.55e-18,10;UBERON:0000411,1.55e-18,10;UBERON:0001950,1.55e-18,10;UBERON:0002619,9.32e-17,17;UBERON:0002420,2.59e-14,8;UBERON:0007245,2.59e-14,8;UBERON:0010009,2.59e-14,8;UBERON:0010011,2.59e-14,8;UBERON:0000454,2.59e-14,8;UBERON:0000025,5.47e-12,114;UBERON:0004111,1.25e-10,122;UBERON:0001948,1.15e-09,5;UBERON:0002315,1.15e-09,5;UBERON:0000369,1.41e-09,5;UBERON:0002435,1.41e-09,5;UBERON:0000204,1.41e-09,5;UBERON:0010082,1.41e-09,5;UBERON:0011216,5.75e-09,194;UBERON:0002240,5.70e-08,6;UBERON:0005174,5.70e-08,6;UBERON:0001137,5.70e-08,6;UBERON:0002950,1.03e-07,4;UBERON:0001891,1.03e-07,4;UBERON:0009616,1.03e-07,4;UBERON:0010286,1.03e-07,4;UBERON:0000483,3.07e-07,174;UBERON:0000119,4.73e-07,176;UBERON:0004684,5.74e-07,3;UBERON:0002275,5.74e-07,3|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0.68487187290202,0.159544317990673,0.171200729931206,0.174840804837995,0,0,0.699561878128147,0.157731082679119,0.274228867211478,0,0.935476191661768,0.198581902401771,0,0,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0,0.515672092277442,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,1.55534418462716,1.35005938331691,0.420649922702764,1.99955689082663,1.54607978666129,0.979926393719632,1.0543001812006,0,3.30347642998166,3.06449611404451,2.15049146558741,1.45074916503213,2.37867873366265,2.08365348222704,1.95428099300967,1.68828783009504,2.44477196442896,2.94628585473668,2.56269025438385,2.05039390407831,0.302904773332736,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0.304465478312141,0.461230994512117,0,0.352766121407114,0.502666365318702,0.247194967734374,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.49790639404823,2.74500361691176,2.01046963380583,3.30266208365325,2.301439115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| ||
|EntrezGene=22026 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P49117 | |||
|association_with_transcript=0bp_to_ENSMUST00000113460_5end | |||
|description=CAGE_peak_6_at_Nr2c2_5end | |||
|id=chr6:92041372..92041383,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.38e-12!23;CL:0000337!7.38e-12!23;CL:0000540!1.92e-11!33;CL:0000047!1.92e-11!33;CL:0000031!1.92e-11!33;CL:0000404!1.92e-11!33;CL:0000393!9.25e-10!39;CL:0000211!9.25e-10!39;CL:0000221!8.21e-09!44;CL:0000133!8.21e-09!44;CL:0002319!1.96e-08!43;CL:0000055!6.00e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.22e-28,23;CL:0000337,8.22e-28,23;CL:0000540,7.55e-24,33;CL:0000047,7.55e-24,33;CL:0000031,7.55e-24,33;CL:0000404,7.55e-24,33;CL:0000393,3.16e-19,39;CL:0000211,3.16e-19,39;CL:0002319,7.18e-17,43;CL:0000221,2.39e-16,44;CL:0000133,2.39e-16,44;CL:0002321,4.03e-08,70;CL:0002610,5.74e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.40e-21!73;UBERON:0005743!3.40e-21!73;UBERON:0000073!7.92e-21!75;UBERON:0001016!7.92e-21!75;UBERON:0001049!1.40e-19!52;UBERON:0005068!1.40e-19!52;UBERON:0006241!1.40e-19!52;UBERON:0007135!1.40e-19!52;UBERON:0002346!2.79e-19!71;UBERON:0003075!2.79e-19!71;UBERON:0007284!2.79e-19!71;UBERON:0000955!1.05e-18!50;UBERON:0006238!1.05e-18!50;UBERON:0002616!2.87e-18!49;UBERON:0000033!4.20e-18!63;UBERON:0004121!1.94e-17!102;UBERON:0000924!1.94e-17!102;UBERON:0006601!1.94e-17!102;UBERON:0002020!2.93e-17!34;UBERON:0003056!2.90e-16!49;UBERON:0003080!1.20e-15!40;UBERON:0002780!4.28e-15!39;UBERON:0001890!4.28e-15!39;UBERON:0006240!4.28e-15!39;UBERON:0002791!4.03e-14!29;UBERON:0003528!4.03e-14!29;UBERON:0001893!4.03e-14!29;UBERON:0007811!1.00e-10!86;UBERON:0000153!3.40e-10!94;UBERON:0000956!2.27e-09!21;UBERON:0001869!2.27e-09!21;UBERON:0000203!2.27e-09!21;UBERON:0000025!2.33e-08!114;UBERON:0002619!9.42e-08!17;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10;UBERON:0004111!1.31e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.53e-41,34;UBERON:0000073,1.44e-40,54;UBERON:0001017,8.65e-39,73;UBERON:0001016,1.76e-37,75;UBERON:0001049,1.81e-34,52;UBERON:0005068,1.81e-34,52;UBERON:0006241,1.81e-34,52;UBERON:0007135,1.81e-34,52;UBERON:0002346,7.42e-34,64;UBERON:0003075,7.42e-34,64;UBERON:0007284,7.42e-34,64;UBERON:0003528,6.04e-33,29;UBERON:0002791,6.04e-33,29;UBERON:0001893,6.04e-33,29;UBERON:0004121,1.35e-30,95;UBERON:0000924,1.35e-30,95;UBERON:0006601,1.35e-30,95;UBERON:0003080,1.67e-30,40;UBERON:0002780,4.41e-29,39;UBERON:0001890,4.41e-29,39;UBERON:0006240,4.41e-29,39;UBERON:0010371,1.69e-28,73;UBERON:0002616,1.40e-27,46;UBERON:0003056,2.52e-27,49;UBERON:0000955,7.93e-27,47;UBERON:0006238,7.93e-27,47;UBERON:0010314,1.22e-20,92;UBERON:0000956,4.50e-20,21;UBERON:0001869,4.50e-20,21;UBERON:0000203,4.50e-20,21;UBERON:0002021,1.55e-18,10;UBERON:0000411,1.55e-18,10;UBERON:0001950,1.55e-18,10;UBERON:0002619,9.32e-17,17;UBERON:0002420,2.59e-14,8;UBERON:0007245,2.59e-14,8;UBERON:0010009,2.59e-14,8;UBERON:0010011,2.59e-14,8;UBERON:0000454,2.59e-14,8;UBERON:0000025,5.47e-12,114;UBERON:0004111,1.25e-10,122;UBERON:0001948,1.15e-09,5;UBERON:0002315,1.15e-09,5;UBERON:0000369,1.41e-09,5;UBERON:0002435,1.41e-09,5;UBERON:0000204,1.41e-09,5;UBERON:0010082,1.41e-09,5;UBERON:0011216,5.75e-09,194;UBERON:0002240,5.70e-08,6;UBERON:0005174,5.70e-08,6;UBERON:0001137,5.70e-08,6;UBERON:0002950,1.03e-07,4;UBERON:0001891,1.03e-07,4;UBERON:0009616,1.03e-07,4;UBERON:0010286,1.03e-07,4;UBERON:0000483,3.07e-07,174;UBERON:0000119,4.73e-07,176;UBERON:0004684,5.74e-07,3;UBERON:0002275,5.74e-07,3 | |||
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|short_description=p6@Nr2c2 | |||
}} |
Revision as of 10:59, 14 September 2013
Short description: | p6@Nr2c2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nr2c2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000113460_5end |
EntrezGene: | Nr2c2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.22e-28 | 23 |
neuroblast (sensu Vertebrata) | 8.22e-28 | 23 |
neuron | 7.55e-24 | 33 |
neuronal stem cell | 7.55e-24 | 33 |
neuroblast | 7.55e-24 | 33 |
electrically signaling cell | 7.55e-24 | 33 |
electrically responsive cell | 3.16e-19 | 39 |
electrically active cell | 3.16e-19 | 39 |
neural cell | 7.18e-17 | 43 |
ectodermal cell | 2.39e-16 | 44 |
neurectodermal cell | 2.39e-16 | 44 |
embryonic cell | 4.03e-08 | 70 |
raphe nuclei neuron | 5.74e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.