FFCP PHASE1:Mm9::chr7:54387856..54387932,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19259|HGNC=|MCL_coexpression_id=13|UniProt=P54830,Q80WU9|association_with_transcript=35bp_to_NM_001163565,uc009gzz.2,uc009haa.2_5end|description=CAGE_peak_2_at_Ptpn5_5end|id=chr7:54387856..54387932,-|ontology_enrichment_celltype=CL:0000117!6.36e-16!23;CL:0000337!6.36e-16!23;CL:0000540!2.97e-15!33;CL:0000047!2.97e-15!33;CL:0000031!2.97e-15!33;CL:0000404!2.97e-15!33;CL:0000393!4.73e-14!39;CL:0000211!4.73e-14!39;CL:0000221!3.51e-12!44;CL:0000133!3.51e-12!44;CL:0002319!5.50e-12!43;CL:0000055!7.57e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.70e-20,23;CL:0000337,5.70e-20,23;CL:0000540,2.28e-14,33;CL:0000047,2.28e-14,33;CL:0000031,2.28e-14,33;CL:0000404,2.28e-14,33;CL:0000393,4.87e-14,39;CL:0000211,4.87e-14,39;CL:0000221,3.64e-10,44;CL:0000133,3.64e-10,44;CL:0002319,6.39e-10,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.37e-25!75;UBERON:0001016!2.37e-25!75;UBERON:0001017!3.09e-25!73;UBERON:0005743!3.09e-25!73;UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0001049!3.68e-21!52;UBERON:0005068!3.68e-21!52;UBERON:0006241!3.68e-21!52;UBERON:0007135!3.68e-21!52;UBERON:0004121!1.95e-20!102;UBERON:0000924!1.95e-20!102;UBERON:0006601!1.95e-20!102;UBERON:0002020!1.12e-19!34;UBERON:0000955!2.61e-19!50;UBERON:0006238!2.61e-19!50;UBERON:0002616!9.02e-19!49;UBERON:0000033!1.03e-18!63;UBERON:0003056!2.01e-16!49;UBERON:0003080!4.97e-16!40;UBERON:0002791!8.92e-16!29;UBERON:0003528!8.92e-16!29;UBERON:0001893!8.92e-16!29;UBERON:0002780!2.03e-15!39;UBERON:0001890!2.03e-15!39;UBERON:0006240!2.03e-15!39;UBERON:0000956!1.04e-10!21;UBERON:0001869!1.04e-10!21;UBERON:0000203!1.04e-10!21;UBERON:0002619!9.20e-09!17;UBERON:0007811!6.51e-08!86;UBERON:0002021!8.78e-08!10;UBERON:0000411!8.78e-08!10;UBERON:0001950!8.78e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-27,54;UBERON:0001017,3.08e-26,73;UBERON:0002346,4.80e-26,64;UBERON:0003075,4.80e-26,64;UBERON:0007284,4.80e-26,64;UBERON:0001049,8.25e-26,52;UBERON:0005068,8.25e-26,52;UBERON:0006241,8.25e-26,52;UBERON:0007135,8.25e-26,52;UBERON:0001016,8.93e-26,75;UBERON:0002020,1.84e-24,34;UBERON:0010371,5.02e-22,73;UBERON:0004121,6.13e-22,95;UBERON:0000924,6.13e-22,95;UBERON:0006601,6.13e-22,95;UBERON:0000955,6.36e-21,47;UBERON:0006238,6.36e-21,47;UBERON:0002616,2.95e-20,46;UBERON:0003056,3.11e-20,49;UBERON:0003080,7.63e-20,40;UBERON:0003528,1.81e-19,29;UBERON:0002791,1.81e-19,29;UBERON:0001893,1.81e-19,29;UBERON:0002780,4.61e-19,39;UBERON:0001890,4.61e-19,39;UBERON:0006240,4.61e-19,39;UBERON:0010314,5.17e-14,92;UBERON:0000956,5.41e-13,21;UBERON:0001869,5.41e-13,21;UBERON:0000203,5.41e-13,21;UBERON:0002619,1.67e-10,17;UBERON:0002021,1.54e-09,10;UBERON:0000411,1.54e-09,10;UBERON:0001950,1.54e-09,10;UBERON:0000025,3.06e-09,114;UBERON:0004111,6.11e-09,122;UBERON:0002420,8.88e-08,8;UBERON:0007245,8.88e-08,8;UBERON:0010009,8.88e-08,8;UBERON:0010011,8.88e-08,8;UBERON:0000454,8.88e-08,8;UBERON:0002240,5.91e-07,6;UBERON:0005174,5.91e-07,6;UBERON:0001137,5.91e-07,6|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56885282344521,1.58865521921416,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9028013572429,5.77848507951233,37.9941776974681,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,35.6076971112892,40.7323054039465,27.8885817542719,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.898800331555214,1.15265491596466,7.98410014775278,9.99043943654511,9.25429829946081,42.5619966761667,37.9893890436775,10.2892271340561,10.2554653989513,14.7075005857603,20.9220173898839,28.601963731082,29.4924543851987,37.3238194276449,38.4248103130121,27.6084086395083,22.6138229191119,23.0732670112989,20.7805616976462,45.3728021629448,38.0132387733605,38.7710847316625,0.454357159999104,1.058001841495,0,0,0,0,0,0,0.561777680527007,0,0,0,2.25349471642689,0,0,0,0,0,0,0.34255163915718,0,0,0.867426633830679,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,2.34224637609238,3.14170060220183,0,0,0,0,21.2702707954848,17.3850229071078,16.2094114225595,22.7709859451882,21.9915293304084,30.5448425502553,20.766881672673,0.407357455401265,2.73695335342205,16.4269792981889,0,0.130120442962704,1.14951052216736,2.52086981727489,3.76762044589288,3.19771546011241,3.07472928683639,2.99845518591132,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1923260394378,20.0663994139605,0.330418782983798,0,0.213288250535234,0.696710015581316,0.644337306610467,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0.37898282354097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| ||
|EntrezGene=19259 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=P54830,Q80WU9 | |||
|association_with_transcript=35bp_to_NM_001163565,uc009gzz.2,uc009haa.2_5end | |||
|description=CAGE_peak_2_at_Ptpn5_5end | |||
|id=chr7:54387856..54387932,- | |||
|ontology_enrichment_celltype=CL:0000117!6.36e-16!23;CL:0000337!6.36e-16!23;CL:0000540!2.97e-15!33;CL:0000047!2.97e-15!33;CL:0000031!2.97e-15!33;CL:0000404!2.97e-15!33;CL:0000393!4.73e-14!39;CL:0000211!4.73e-14!39;CL:0000221!3.51e-12!44;CL:0000133!3.51e-12!44;CL:0002319!5.50e-12!43;CL:0000055!7.57e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.70e-20,23;CL:0000337,5.70e-20,23;CL:0000540,2.28e-14,33;CL:0000047,2.28e-14,33;CL:0000031,2.28e-14,33;CL:0000404,2.28e-14,33;CL:0000393,4.87e-14,39;CL:0000211,4.87e-14,39;CL:0000221,3.64e-10,44;CL:0000133,3.64e-10,44;CL:0002319,6.39e-10,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.37e-25!75;UBERON:0001016!2.37e-25!75;UBERON:0001017!3.09e-25!73;UBERON:0005743!3.09e-25!73;UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0001049!3.68e-21!52;UBERON:0005068!3.68e-21!52;UBERON:0006241!3.68e-21!52;UBERON:0007135!3.68e-21!52;UBERON:0004121!1.95e-20!102;UBERON:0000924!1.95e-20!102;UBERON:0006601!1.95e-20!102;UBERON:0002020!1.12e-19!34;UBERON:0000955!2.61e-19!50;UBERON:0006238!2.61e-19!50;UBERON:0002616!9.02e-19!49;UBERON:0000033!1.03e-18!63;UBERON:0003056!2.01e-16!49;UBERON:0003080!4.97e-16!40;UBERON:0002791!8.92e-16!29;UBERON:0003528!8.92e-16!29;UBERON:0001893!8.92e-16!29;UBERON:0002780!2.03e-15!39;UBERON:0001890!2.03e-15!39;UBERON:0006240!2.03e-15!39;UBERON:0000956!1.04e-10!21;UBERON:0001869!1.04e-10!21;UBERON:0000203!1.04e-10!21;UBERON:0002619!9.20e-09!17;UBERON:0007811!6.51e-08!86;UBERON:0002021!8.78e-08!10;UBERON:0000411!8.78e-08!10;UBERON:0001950!8.78e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-27,54;UBERON:0001017,3.08e-26,73;UBERON:0002346,4.80e-26,64;UBERON:0003075,4.80e-26,64;UBERON:0007284,4.80e-26,64;UBERON:0001049,8.25e-26,52;UBERON:0005068,8.25e-26,52;UBERON:0006241,8.25e-26,52;UBERON:0007135,8.25e-26,52;UBERON:0001016,8.93e-26,75;UBERON:0002020,1.84e-24,34;UBERON:0010371,5.02e-22,73;UBERON:0004121,6.13e-22,95;UBERON:0000924,6.13e-22,95;UBERON:0006601,6.13e-22,95;UBERON:0000955,6.36e-21,47;UBERON:0006238,6.36e-21,47;UBERON:0002616,2.95e-20,46;UBERON:0003056,3.11e-20,49;UBERON:0003080,7.63e-20,40;UBERON:0003528,1.81e-19,29;UBERON:0002791,1.81e-19,29;UBERON:0001893,1.81e-19,29;UBERON:0002780,4.61e-19,39;UBERON:0001890,4.61e-19,39;UBERON:0006240,4.61e-19,39;UBERON:0010314,5.17e-14,92;UBERON:0000956,5.41e-13,21;UBERON:0001869,5.41e-13,21;UBERON:0000203,5.41e-13,21;UBERON:0002619,1.67e-10,17;UBERON:0002021,1.54e-09,10;UBERON:0000411,1.54e-09,10;UBERON:0001950,1.54e-09,10;UBERON:0000025,3.06e-09,114;UBERON:0004111,6.11e-09,122;UBERON:0002420,8.88e-08,8;UBERON:0007245,8.88e-08,8;UBERON:0010009,8.88e-08,8;UBERON:0010011,8.88e-08,8;UBERON:0000454,8.88e-08,8;UBERON:0002240,5.91e-07,6;UBERON:0005174,5.91e-07,6;UBERON:0001137,5.91e-07,6 | |||
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|short_description=p2@Ptpn5 | |||
}} |
Revision as of 13:52, 14 September 2013
Short description: | p2@Ptpn5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptpn5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 35bp_to_NM_001163565, uc009gzz.2, uc009haa.2_5end |
EntrezGene: | Ptpn5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.70e-20 | 23 |
neuroblast (sensu Vertebrata) | 5.70e-20 | 23 |
neuron | 2.28e-14 | 33 |
neuronal stem cell | 2.28e-14 | 33 |
neuroblast | 2.28e-14 | 33 |
electrically signaling cell | 2.28e-14 | 33 |
electrically responsive cell | 4.87e-14 | 39 |
electrically active cell | 4.87e-14 | 39 |
ectodermal cell | 3.64e-10 | 44 |
neurectodermal cell | 3.64e-10 | 44 |
neural cell | 6.39e-10 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.