FFCP PHASE1:Mm9::chrX:133371908..133371920,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=212|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:133371908..133371920,+|id=chrX:133371908..133371920,+|ontology_enrichment_celltype=CL:0000540!2.28e-08!33;CL:0000047!2.28e-08!33;CL:0000031!2.28e-08!33;CL:0000404!2.28e-08!33;CL:0000221!3.12e-08!44;CL:0000133!3.12e-08!44;CL:0002319!1.20e-07!43|ontology_enrichment_celltype_v019_2=CL:0002610,1.29e-09,3;CL:0002614,9.35e-09,3;CL:0000117,7.37e-08,23;CL:0000337,7.37e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.02e-22!75;UBERON:0001016!5.02e-22!75;UBERON:0001017!2.13e-20!73;UBERON:0005743!2.13e-20!73;UBERON:0004121!3.33e-20!102;UBERON:0000924!3.33e-20!102;UBERON:0006601!3.33e-20!102;UBERON:0002346!3.16e-16!71;UBERON:0003075!3.16e-16!71;UBERON:0007284!3.16e-16!71;UBERON:0000955!3.33e-16!50;UBERON:0006238!3.33e-16!50;UBERON:0001049!4.29e-16!52;UBERON:0005068!4.29e-16!52;UBERON:0006241!4.29e-16!52;UBERON:0007135!4.29e-16!52;UBERON:0000033!1.23e-15!63;UBERON:0002616!2.32e-15!49;UBERON:0002020!4.92e-14!34;UBERON:0002021!1.04e-12!10;UBERON:0000411!1.04e-12!10;UBERON:0001950!1.04e-12!10;UBERON:0002791!2.63e-11!29;UBERON:0003528!2.63e-11!29;UBERON:0001893!2.63e-11!29;UBERON:0003056!3.32e-10!49;UBERON:0003080!5.61e-10!40;UBERON:0002780!3.28e-09!39;UBERON:0001890!3.28e-09!39;UBERON:0006240!3.28e-09!39;UBERON:0007811!1.45e-08!86;UBERON:0002298!2.07e-08!6;UBERON:0000956!1.11e-07!21;UBERON:0001869!1.11e-07!21;UBERON:0000203!1.11e-07!21;UBERON:0002619!1.35e-07!17;UBERON:0003076!1.42e-07!12;UBERON:0003057!1.42e-07!12;UBERON:0000153!5.34e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.08e-35,54;UBERON:0001016,3.32e-32,75;UBERON:0001049,2.58e-31,52;UBERON:0005068,2.58e-31,52;UBERON:0006241,2.58e-31,52;UBERON:0007135,2.58e-31,52;UBERON:0001017,4.21e-31,73;UBERON:0000955,2.84e-27,47;UBERON:0006238,2.84e-27,47;UBERON:0002346,1.63e-26,64;UBERON:0003075,1.63e-26,64;UBERON:0007284,1.63e-26,64;UBERON:0004121,6.24e-26,95;UBERON:0000924,6.24e-26,95;UBERON:0006601,6.24e-26,95;UBERON:0002616,1.42e-25,46;UBERON:0002021,4.16e-25,10;UBERON:0000411,4.16e-25,10;UBERON:0001950,4.16e-25,10;UBERON:0002020,3.79e-23,34;UBERON:0010371,1.64e-22,73;UBERON:0003080,1.19e-19,40;UBERON:0003528,1.21e-19,29;UBERON:0002791,1.21e-19,29;UBERON:0001893,1.21e-19,29;UBERON:0002780,5.07e-18,39;UBERON:0001890,5.07e-18,39;UBERON:0006240,5.07e-18,39;UBERON:0003056,3.89e-17,49;UBERON:0002619,1.15e-16,17;UBERON:0010314,1.27e-16,92;UBERON:0000956,1.70e-15,21;UBERON:0001869,1.70e-15,21;UBERON:0000203,1.70e-15,21;UBERON:0003076,1.37e-12,12;UBERON:0003057,1.37e-12,12;UBERON:0000025,4.21e-11,114;UBERON:0002950,6.20e-11,4;UBERON:0001891,6.20e-11,4;UBERON:0009616,6.20e-11,4;UBERON:0010286,6.20e-11,4;UBERON:0004111,5.45e-10,122;UBERON:0004684,1.29e-09,3;UBERON:0002275,1.29e-09,3;UBERON:0002038,9.35e-09,3;UBERON:0009663,9.35e-09,3;UBERON:0009661,9.35e-09,3;UBERON:0000125,9.35e-09,3;UBERON:0002308,9.35e-09,3;UBERON:0011216,2.00e-08,194;UBERON:0004733,2.25e-07,6;UBERON:0004732,2.25e-07,6;UBERON:0002028,2.25e-07,6;UBERON:0007277,2.25e-07,6;UBERON:0002240,9.74e-07,6;UBERON:0005174,9.74e-07,6;UBERON:0001137,9.74e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0.856952953211411,1.54607978666129,0,0,0,14.3150645299205,27.3250903502302,33.9470438496298,0,0.0914876436024097,0.52091337055676,6.97957497503452,2.8138130501584,19.0997809721013,2.65165726926301,1.13897344639282,0,0.37863096666592,1.36028808192214,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,2.04946557908083,5.65506108396329,0,0,0,0,3.44518470631092,2.74500361691176,0,1.56441888173049,5.11430914660661,9.55825004973976,18.8199865158599,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0,1.05144974282064,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,6.42202359951168,34.2258124849233,0,0,0.631016438832513,0,0.646270193198397,0.238968797952552,1.11399337041197,0.283076530788832,0.404810701674894,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,13.3506217447567,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.469428954583016,0.39061315453185,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5540442228096,7.82552902062201,10.8850147553485,10.6548973053086,8.22099023724771,3.0215755895588,4.05013500139084,4.05289082901798,3.62513927187364,3.10656187051092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843|short_description=p@chrX:133371908..133371920,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:133371908..133371920,+ | |||
|id=chrX:133371908..133371920,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.28e-08!33;CL:0000047!2.28e-08!33;CL:0000031!2.28e-08!33;CL:0000404!2.28e-08!33;CL:0000221!3.12e-08!44;CL:0000133!3.12e-08!44;CL:0002319!1.20e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.29e-09,3;CL:0002614,9.35e-09,3;CL:0000117,7.37e-08,23;CL:0000337,7.37e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.02e-22!75;UBERON:0001016!5.02e-22!75;UBERON:0001017!2.13e-20!73;UBERON:0005743!2.13e-20!73;UBERON:0004121!3.33e-20!102;UBERON:0000924!3.33e-20!102;UBERON:0006601!3.33e-20!102;UBERON:0002346!3.16e-16!71;UBERON:0003075!3.16e-16!71;UBERON:0007284!3.16e-16!71;UBERON:0000955!3.33e-16!50;UBERON:0006238!3.33e-16!50;UBERON:0001049!4.29e-16!52;UBERON:0005068!4.29e-16!52;UBERON:0006241!4.29e-16!52;UBERON:0007135!4.29e-16!52;UBERON:0000033!1.23e-15!63;UBERON:0002616!2.32e-15!49;UBERON:0002020!4.92e-14!34;UBERON:0002021!1.04e-12!10;UBERON:0000411!1.04e-12!10;UBERON:0001950!1.04e-12!10;UBERON:0002791!2.63e-11!29;UBERON:0003528!2.63e-11!29;UBERON:0001893!2.63e-11!29;UBERON:0003056!3.32e-10!49;UBERON:0003080!5.61e-10!40;UBERON:0002780!3.28e-09!39;UBERON:0001890!3.28e-09!39;UBERON:0006240!3.28e-09!39;UBERON:0007811!1.45e-08!86;UBERON:0002298!2.07e-08!6;UBERON:0000956!1.11e-07!21;UBERON:0001869!1.11e-07!21;UBERON:0000203!1.11e-07!21;UBERON:0002619!1.35e-07!17;UBERON:0003076!1.42e-07!12;UBERON:0003057!1.42e-07!12;UBERON:0000153!5.34e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.08e-35,54;UBERON:0001016,3.32e-32,75;UBERON:0001049,2.58e-31,52;UBERON:0005068,2.58e-31,52;UBERON:0006241,2.58e-31,52;UBERON:0007135,2.58e-31,52;UBERON:0001017,4.21e-31,73;UBERON:0000955,2.84e-27,47;UBERON:0006238,2.84e-27,47;UBERON:0002346,1.63e-26,64;UBERON:0003075,1.63e-26,64;UBERON:0007284,1.63e-26,64;UBERON:0004121,6.24e-26,95;UBERON:0000924,6.24e-26,95;UBERON:0006601,6.24e-26,95;UBERON:0002616,1.42e-25,46;UBERON:0002021,4.16e-25,10;UBERON:0000411,4.16e-25,10;UBERON:0001950,4.16e-25,10;UBERON:0002020,3.79e-23,34;UBERON:0010371,1.64e-22,73;UBERON:0003080,1.19e-19,40;UBERON:0003528,1.21e-19,29;UBERON:0002791,1.21e-19,29;UBERON:0001893,1.21e-19,29;UBERON:0002780,5.07e-18,39;UBERON:0001890,5.07e-18,39;UBERON:0006240,5.07e-18,39;UBERON:0003056,3.89e-17,49;UBERON:0002619,1.15e-16,17;UBERON:0010314,1.27e-16,92;UBERON:0000956,1.70e-15,21;UBERON:0001869,1.70e-15,21;UBERON:0000203,1.70e-15,21;UBERON:0003076,1.37e-12,12;UBERON:0003057,1.37e-12,12;UBERON:0000025,4.21e-11,114;UBERON:0002950,6.20e-11,4;UBERON:0001891,6.20e-11,4;UBERON:0009616,6.20e-11,4;UBERON:0010286,6.20e-11,4;UBERON:0004111,5.45e-10,122;UBERON:0004684,1.29e-09,3;UBERON:0002275,1.29e-09,3;UBERON:0002038,9.35e-09,3;UBERON:0009663,9.35e-09,3;UBERON:0009661,9.35e-09,3;UBERON:0000125,9.35e-09,3;UBERON:0002308,9.35e-09,3;UBERON:0011216,2.00e-08,194;UBERON:0004733,2.25e-07,6;UBERON:0004732,2.25e-07,6;UBERON:0002028,2.25e-07,6;UBERON:0007277,2.25e-07,6;UBERON:0002240,9.74e-07,6;UBERON:0005174,9.74e-07,6;UBERON:0001137,9.74e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0.856952953211411,1.54607978666129,0,0,0,14.3150645299205,27.3250903502302,33.9470438496298,0,0.0914876436024097,0.52091337055676,6.97957497503452,2.8138130501584,19.0997809721013,2.65165726926301,1.13897344639282,0,0.37863096666592,1.36028808192214,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,2.04946557908083,5.65506108396329,0,0,0,0,3.44518470631092,2.74500361691176,0,1.56441888173049,5.11430914660661,9.55825004973976,18.8199865158599,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0,1.05144974282064,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,6.42202359951168,34.2258124849233,0,0,0.631016438832513,0,0.646270193198397,0.238968797952552,1.11399337041197,0.283076530788832,0.404810701674894,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,13.3506217447567,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.469428954583016,0.39061315453185,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5540442228096,7.82552902062201,10.8850147553485,10.6548973053086,8.22099023724771,3.0215755895588,4.05013500139084,4.05289082901798,3.62513927187364,3.10656187051092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p@chrX:133371908..133371920,+ | |||
}} |
Revision as of 19:21, 14 September 2013
Short description: | p@chrX:133371908..133371920, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133371908..133371920, + |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.29e-09 | 3 |
neuron of the substantia nigra | 9.35e-09 | 3 |
CNS neuron (sensu Vertebrata) | 7.37e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.37e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.