FFCP PHASE1:Hg19::chr11:66384906..66384916,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=10432 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14219 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=292bp_to_ENST00000461478_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_3_at_RBM14_5end | |||
|id=chr11:66384906..66384916,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.96e-31!42;CL:0000860!2.50e-28!45;CL:0000557!2.17e-25!71;CL:0002009!2.53e-23!65;CL:0000766!7.92e-22!76;CL:0002194!9.39e-22!63;CL:0000576!9.39e-22!63;CL:0000040!9.39e-22!63;CL:0000559!9.39e-22!63;CL:0000839!9.58e-22!70;CL:0002371!3.21e-14!591;CL:0000763!2.12e-13!112;CL:0000049!2.12e-13!112;CL:0000144!1.02e-11!625;CL:0002139!1.03e-09!24;CL:0000548!2.45e-09!679;CL:0000004!2.45e-09!679;CL:0000255!2.45e-09!679;CL:0000012!5.80e-09!682;CL:0000723!7.69e-09!436;CL:0000048!9.01e-09!430;CL:0000738!1.28e-08!140;CL:0002031!1.93e-08!124;CL:0000071!2.13e-08!18;CL:0002546!2.13e-08!18;CL:0000034!7.05e-08!444;CL:0002087!1.30e-07!119;CL:0000115!9.34e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-72;33!CL:0002057;1.73e-72;33!CL:0000473;3.50e-49;39!CL:0000234;3.50e-49;39!CL:0000576;1.06e-39;48!CL:0000766;2.28e-25;69!CL:0000071;1.98e-15;18!CL:0000763;1.99e-12;100!CL:0002139;5.47e-11;24!CL:1000413;6.05e-10;9!CL:0002087;3.87e-09;104!CL:0000115;2.55e-08;36!CL:0000738;1.15e-07;136!CL:0001014;2.80e-07;2!CL:0001016;2.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.36e-73,42;CL:0002057,1.36e-73,42;CL:0000473,3.86e-63,48;CL:0000234,3.86e-63,48;CL:0000557,2.64e-59,67;CL:0002009,3.71e-53,61;CL:0000766,5.01e-51,72;CL:0000839,1.73e-50,66;CL:0002194,1.61e-48,59;CL:0000576,1.61e-48,59;CL:0000040,1.61e-48,59;CL:0000559,1.61e-48,59;CL:0000763,1.09e-36,108;CL:0000049,1.09e-36,108;CL:0002031,1.08e-26,120;CL:0000738,1.12e-26,136;CL:0002087,8.32e-22,115;CL:0002032,5.92e-21,161;CL:0000837,5.92e-21,161;CL:0000037,8.93e-21,168;CL:0000988,3.76e-19,177;CL:0000071,1.03e-15,18;CL:0002546,1.03e-15,18;CL:0002139,3.41e-11,24;CL:1000413,4.57e-10,9;CL:0000115,1.59e-09,36;CL:0000134,1.85e-08,354;CL:0002320,4.55e-08,361;CL:0000048,1.91e-07,427;CL:0001014,2.81e-07,2;CL:0001016,2.81e-07,2;CL:0000723,3.62e-07,433;CL:0002078,4.54e-07,45;CL:0000034,8.24e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.18e-53;42!CL:0002546;1.98e-15;18!CL:0000049;1.03e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.21e-23!80;UBERON:0003081!1.11e-22!216;UBERON:0001474!3.10e-21!86;UBERON:0002193!1.27e-20!112;UBERON:0002390!8.26e-20!102;UBERON:0003061!8.26e-20!102;UBERON:0004765!1.07e-19!101;UBERON:0001434!1.07e-19!101;UBERON:0002204!2.07e-19!167;UBERON:0002405!1.12e-16!115;UBERON:0000926!1.53e-12!448;UBERON:0004120!1.53e-12!448;UBERON:0006603!1.53e-12!448;UBERON:0000055!1.27e-10!69;UBERON:0001981!1.71e-09!60;UBERON:0007500!1.71e-09!60;UBERON:0004537!1.71e-09!60;UBERON:0006965!1.71e-09!60;UBERON:0002049!1.73e-09!79;UBERON:0007798!1.73e-09!79;UBERON:0000467!2.24e-09!625;UBERON:0000480!2.98e-09!626;UBERON:0004535!3.67e-09!110;UBERON:0001009!5.74e-09!113;UBERON:0001986!2.13e-08!18;UBERON:0004638!2.13e-08!18;UBERON:0004852!2.13e-08!18;UBERON:0004872!7.35e-08!84;UBERON:0000468!4.11e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.98e-15;18!UBERON:0001986;1.98e-15;18!UBERON:0004852;1.98e-15;18!UBERON:0000487;3.38e-12;22!UBERON:0006914;1.86e-10;25!UBERON:0003915;6.05e-10;9!UBERON:0004700;6.05e-10;9!UBERON:0001917;6.05e-10;9!UBERON:0000490;1.85e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.71e-54,76;UBERON:0001474,3.60e-49,82;UBERON:0004765,2.71e-46,90;UBERON:0002405,2.40e-44,93;UBERON:0002390,1.36e-43,98;UBERON:0003061,1.36e-43,98;UBERON:0001434,1.49e-40,100;UBERON:0002193,1.52e-40,108;UBERON:0003081,2.08e-39,203;UBERON:0002204,3.69e-26,167;UBERON:0000926,3.28e-21,315;UBERON:0004120,3.28e-21,315;UBERON:0006603,3.28e-21,315;UBERON:0004638,1.03e-15,18;UBERON:0001986,1.03e-15,18;UBERON:0004852,1.03e-15,18;UBERON:0000487,2.01e-12,22;UBERON:0006914,1.18e-10,25;UBERON:0003915,4.57e-10,9;UBERON:0004700,4.57e-10,9;UBERON:0001917,4.57e-10,9;UBERON:0007500,9.46e-09,59;UBERON:0001981,9.46e-09,59;UBERON:0004537,9.46e-09,59;UBERON:0006965,9.46e-09,59;UBERON:0000055,4.10e-08,68;UBERON:0002384,1.55e-07,371;UBERON:0002050,9.21e-07,564 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0,0,0.786728553697808,1.53531759238885,2.32224184974114,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0.587200878669695,1.66198622559563,1.60435557976113,1.51907609501096,0,0,0,8.43309784921475,3.77875943688809,6.0646015296954,6.50801303335917,3.70051099219643,4.64559556342655,4.31538588483226,4.09857130446561,2.36482229888585,5.86067657252252,3.87290810150296,1.35426486594342,8.84738995850242,4.63940455098338,3.14612878223118,8.26426509401437,6.73950956859797,5.75403413219137,5.93732340336089,5.98390972864896,5.54092175692502,7.54544020434318,3.97169657283798,3.73693349397345,3.26623264833766,3.65038042894141,3.69221035998698,3.63239701580021,7.36555271975129,4.1140110367315,0.211255286311942,0.212604299965044,0.209658645508376,0.561643155732475,1.35159203557356,0.32145117339416,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0.361439152384566,1.00267582127178,0,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,1.72046919021225,0,1.13061588384802,1.67799774483962,1.37559020970034,1.25396979922086,0,0.71153252537342,0.33472061276467,2.01414658554573,0.760272105718513,1.22031028774085,0,1.62028389576352,0.446498641420399,0.22452937262617,0.563057402416611,1.53316637465883,1.89853131913626,1.64881569537367,0,0,0,0,0,0.397227542439656,0,0.709336764396714,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0.624320153660641,0.570471821544449,0.298897361103602,0,0,0,0.61246251376468,0,0,0,0,0,1.43723628363248,0,0,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0,0,0.423863802319124,0.300091096084402,0.412210116953756,0,0.18611685633159,0.506328996723799,0.194874010322397,0,0.0920498986422993,0,0.710019185033229,0.10075209822764,0,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.234817388471643,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0,0.148631162288728,1.87467667973554,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0.088048434013226,1.65862492432618,1.00883967391873,1.00993946741104,0.126995788584338,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,0,0.368738337083406,0,0.195801157462741,0.343143423810856,0.206768026122887,1.07857100409308,0.213455115606889,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0.464841513839837,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,1.13733384070897,0.850468526382578,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.765676274967505,0.2023155617111,1.39453664789186,0,0,0.616067160352178,0,0,0.55597265731176,0.715624433709956,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0.54907405947211,0,1.2130948894399,0,1.68503382495592,0,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0.876901770507525,0,0,0.811641507850816,0.92947049429925,0.563391205064483,0,0,1.07001315444375,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0,0,0.540031437238115,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0.851692475380653,0.687010689511529,0.614481528616916,0.447352215784832,0.500547425135725,0,0,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,1.24415835064723,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965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| |||
|short_description=p3@RBM14 | |||
}} |
Revision as of 08:52, 11 January 2014
Short description: | p3@RBM14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RBM14_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 292bp_to_ENST00000461478_5end |
EntrezGene: | RBM14 |
HGNC: | 14219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.71e-54 | 76 |
bone element | 3.60e-49 | 82 |
skeletal element | 2.71e-46 | 90 |
immune system | 2.40e-44 | 93 |
hematopoietic system | 1.36e-43 | 98 |
blood island | 1.36e-43 | 98 |
skeletal system | 1.49e-40 | 100 |
hemolymphoid system | 1.52e-40 | 108 |
lateral plate mesoderm | 2.08e-39 | 203 |
musculoskeletal system | 3.69e-26 | 167 |
mesoderm | 3.28e-21 | 315 |
mesoderm-derived structure | 3.28e-21 | 315 |
presumptive mesoderm | 3.28e-21 | 315 |
blood vessel endothelium | 1.03e-15 | 18 |
endothelium | 1.03e-15 | 18 |
cardiovascular system endothelium | 1.03e-15 | 18 |
simple squamous epithelium | 2.01e-12 | 22 |
squamous epithelium | 1.18e-10 | 25 |
endothelial tube | 4.57e-10 | 9 |
arterial system endothelium | 4.57e-10 | 9 |
endothelium of artery | 4.57e-10 | 9 |
epithelial tube open at both ends | 9.46e-09 | 59 |
blood vessel | 9.46e-09 | 59 |
blood vasculature | 9.46e-09 | 59 |
vascular cord | 9.46e-09 | 59 |
vessel | 4.10e-08 | 68 |
connective tissue | 1.55e-07 | 371 |
embryonic structure | 9.21e-07 | 564 |