FFCP PHASE1:Hg19::chr21:33708271..33708306,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=9875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17344 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-332bp_to_ENST00000492603_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_URB1_5end | |||
|id=chr21:33708271..33708306,- | |||
|ontology_enrichment_celltype=CL:0000148!6.35e-08!10;CL:0000541!6.35e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.66e-19;10!CL:0000147;1.40e-13;14!CL:0000710;1.86e-09;20!CL:0002566;6.98e-09;1!CL:0000075;5.92e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.25e-19,10;CL:0000541,4.25e-19,10;CL:0000147,1.31e-13,14;CL:0000710,1.78e-09,20;CL:0002566,7.27e-09,1;CL:0000075,5.74e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.22e-24;3!UBERON:0003057;4.22e-24;3!UBERON:0006601;3.10e-13;82!UBERON:0005425;1.60e-09;1!UBERON:0006222;6.98e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.15e-78!57;UBERON:0005068!1.15e-78!57;UBERON:0006241!1.15e-78!57;UBERON:0007135!1.15e-78!57;UBERON:0002780!6.24e-65!41;UBERON:0001890!6.24e-65!41;UBERON:0006240!6.24e-65!41;UBERON:0002616!1.52e-63!59;UBERON:0003080!3.26e-63!42;UBERON:0001017!1.42e-62!82;UBERON:0005743!4.58e-62!86;UBERON:0000073!7.98e-61!94;UBERON:0001016!7.98e-61!94;UBERON:0003075!9.08e-60!86;UBERON:0007284!9.08e-60!86;UBERON:0007023!5.62e-59!115;UBERON:0000955!2.43e-58!69;UBERON:0006238!2.43e-58!69;UBERON:0002346!1.27e-56!90;UBERON:0001893!4.82e-55!34;UBERON:0002020!6.47e-55!34;UBERON:0003528!6.47e-55!34;UBERON:0002791!2.59e-52!33;UBERON:0001869!2.70e-49!32;UBERON:0003056!6.50e-44!61;UBERON:0002619!5.24e-37!22;UBERON:0004121!3.72e-35!169;UBERON:0000924!4.58e-34!173;UBERON:0006601!4.58e-34!173;UBERON:0000033!8.95e-34!123;UBERON:0000956!3.52e-32!25;UBERON:0000203!3.52e-32!25;UBERON:0001950!7.99e-32!20;UBERON:0000153!1.03e-31!129;UBERON:0007811!1.03e-31!129;UBERON:0002308!6.95e-26!9;UBERON:0000125!6.95e-26!9;UBERON:0009663!3.94e-20!7;UBERON:0002420!5.66e-20!9;UBERON:0007245!5.66e-20!9;UBERON:0010009!5.66e-20!9;UBERON:0010011!5.66e-20!9;UBERON:0000454!5.66e-20!9;UBERON:0002298!2.74e-19!8;UBERON:0000025!4.85e-19!194;UBERON:0003076!4.30e-16!15;UBERON:0003057!4.30e-16!15;UBERON:0002021!1.54e-14!5;UBERON:0004111!4.61e-14!241;UBERON:0000483!3.18e-12!309;UBERON:0000200!5.18e-12!6;UBERON:0000119!5.41e-12!312;UBERON:0000369!1.11e-11!4;UBERON:0002435!1.11e-11!4;UBERON:0000204!1.11e-11!4;UBERON:0010082!1.11e-11!4;UBERON:0000477!1.19e-11!286;UBERON:0004732!1.98e-11!13;UBERON:0001894!5.19e-11!7;UBERON:0006222!5.19e-11!7;UBERON:0002240!1.09e-10!3;UBERON:0006331!1.55e-10!3;UBERON:0001896!1.81e-10!3;UBERON:0005290!1.81e-10!3;UBERON:0010096!1.81e-10!3;UBERON:0000988!2.05e-10!3;UBERON:0005174!2.22e-10!5;UBERON:0001137!2.22e-10!5;UBERON:0001872!3.93e-10!5;UBERON:0000064!7.07e-10!219;UBERON:0000349!7.09e-10!5;UBERON:0000475!9.61e-10!365;UBERON:0004733!3.56e-09!12;UBERON:0002028!3.56e-09!12;UBERON:0007277!3.56e-09!12;UBERON:0005383!4.72e-09!3;UBERON:0005382!4.72e-09!3;UBERON:0002771!7.03e-09!3;UBERON:0001871!9.73e-09!7;UBERON:0005162!6.90e-08!2;UBERON:0000122!6.90e-08!2;UBERON:0001897!1.15e-07!2;UBERON:0002148!1.85e-07!2;UBERON:0009662!1.85e-07!2;UBERON:0001954!3.55e-07!2;UBERON:0003022!3.55e-07!2;UBERON:0002421!3.55e-07!2;UBERON:0002600!3.55e-07!2;UBERON:0001875!4.13e-07!2;UBERON:0006514!4.13e-07!2;UBERON:0000062!6.54e-07!511;UBERON:0002360!8.24e-07!2;UBERON:0000094!8.24e-07!2;UBERON:0007645!8.24e-07!2;UBERON:0001905!9.00e-07!2;UBERON:0002757!9.00e-07!2;UBERON:0010134!9.00e-07!2;UBERON:0002784!9.00e-07!2;UBERON:0005408!9.00e-07!2;UBERON:0001899!9.00e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;4.24e-32;6!UBERON:0002240;4.22e-24;3!UBERON:0005174;4.22e-24;3!UBERON:0001137;4.22e-24;3!UBERON:0001896;6.49e-24;3!UBERON:0005290;6.49e-24;3!UBERON:0004732;3.69e-21;13!UBERON:0000073;1.82e-20;53!UBERON:0002616;1.82e-20;53!UBERON:0005162;3.04e-17;2!UBERON:0000122;3.04e-17;2!UBERON:0001897;8.54e-17;2!UBERON:0010225;8.54e-17;2!UBERON:0004733;5.14e-16;12!UBERON:0002028;5.14e-16;12!UBERON:0002780;1.78e-15;41!UBERON:0001890;1.78e-15;41!UBERON:0001017;1.52e-13;75!UBERON:0001016;3.07e-12;83!UBERON:0001893;8.17e-12;34!UBERON:0000988;2.93e-11;3!UBERON:0001894;1.41e-10;7!UBERON:0000941;1.60e-09;1!UBERON:0001785;1.60e-09;1!UBERON:0002464;1.60e-09;1!UBERON:0004904;1.60e-09;1!UBERON:0001021;1.60e-09;1!UBERON:0002336;1.88e-09;1!UBERON:0002038;1.88e-09;1!UBERON:0011215;1.88e-09;1!UBERON:0001018;1.88e-09;1!UBERON:0009661;1.88e-09;1!UBERON:0002950;1.88e-09;1!UBERON:0002473;1.88e-09;1!UBERON:0005340;1.88e-09;1!UBERON:0003544;1.88e-09;1!UBERON:0005970;1.88e-09;1!UBERON:0002316;1.88e-09;1!UBERON:0001020;1.88e-09;1!UBERON:0001891;1.88e-09;1!UBERON:0002437;1.88e-09;1!UBERON:0000955;2.39e-09;68!UBERON:0007190;6.98e-09;1!UBERON:0002784;7.57e-09;4!UBERON:0003528;2.10e-08;34!UBERON:0002020;2.10e-08;34!UBERON:0000125;2.15e-08;9!UBERON:0002308;2.15e-08;9!UBERON:0007023;7.06e-08;114!UBERON:0001869;2.12e-07;32!UBERON:0002791;5.54e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.46e-45,56;UBERON:0005068,2.46e-45,56;UBERON:0006241,2.46e-45,56;UBERON:0007135,2.46e-45,56;UBERON:0003075,1.11e-33,82;UBERON:0007284,1.11e-33,82;UBERON:0001017,1.73e-33,81;UBERON:0000073,1.98e-33,53;UBERON:0002616,1.98e-33,53;UBERON:0001016,2.75e-33,89;UBERON:0002298,3.39e-32,6;UBERON:0003076,3.74e-32,15;UBERON:0003057,3.74e-32,15;UBERON:0002346,5.65e-32,86;UBERON:0010371,6.84e-26,104;UBERON:0000955,3.97e-25,68;UBERON:0006238,3.97e-25,68;UBERON:0002240,3.09e-24,3;UBERON:0005174,3.09e-24,3;UBERON:0001137,3.09e-24,3;UBERON:0001896,1.08e-23,3;UBERON:0005290,1.08e-23,3;UBERON:0010096,1.08e-23,3;UBERON:0007023,1.93e-23,114;UBERON:0004732,3.26e-21,13;UBERON:0002780,3.51e-20,41;UBERON:0001890,3.51e-20,41;UBERON:0003080,3.51e-20,41;UBERON:0006240,3.51e-20,41;UBERON:0010314,1.08e-19,132;UBERON:0005162,2.81e-17,2;UBERON:0000122,2.81e-17,2;UBERON:0001897,1.00e-16,2;UBERON:0010225,1.00e-16,2;UBERON:0004733,4.61e-16,12;UBERON:0002028,4.61e-16,12;UBERON:0007277,4.61e-16,12;UBERON:0004121,7.18e-16,171;UBERON:0000924,7.18e-16,171;UBERON:0006601,7.18e-16,171;UBERON:0003056,9.41e-16,61;UBERON:0001893,6.25e-13,34;UBERON:0000988,1.74e-11,3;UBERON:0011216,2.76e-11,223;UBERON:0000025,5.67e-11,192;UBERON:0001894,1.63e-10,7;UBERON:0006222,1.63e-10,7;UBERON:0003528,5.91e-10,34;UBERON:0002020,5.91e-10,34;UBERON:0000941,1.60e-09,1;UBERON:0001785,1.60e-09,1;UBERON:0002464,1.60e-09,1;UBERON:0004904,1.60e-09,1;UBERON:0001021,1.60e-09,1;UBERON:0003902,1.60e-09,1;UBERON:0005425,1.60e-09,1;UBERON:0002336,1.74e-09,1;UBERON:0011215,1.74e-09,1;UBERON:0001018,1.74e-09,1;UBERON:0002473,1.74e-09,1;UBERON:0005340,1.74e-09,1;UBERON:0003544,1.74e-09,1;UBERON:0005970,1.74e-09,1;UBERON:0002316,1.74e-09,1;UBERON:0001020,1.74e-09,1;UBERON:0002437,1.74e-09,1;UBERON:0002038,2.04e-09,1;UBERON:0009661,2.04e-09,1;UBERON:0002950,2.04e-09,1;UBERON:0001891,2.04e-09,1;UBERON:0009616,2.04e-09,1;UBERON:0010286,2.04e-09,1;UBERON:0007190,6.72e-09,1;UBERON:0002784,8.19e-09,4;UBERON:0000125,1.85e-08,9;UBERON:0002308,1.85e-08,9;UBERON:0004111,4.35e-08,240;UBERON:0002791,7.76e-08,32;UBERON:0001869,9.40e-08,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46045156871989,0,1.17217447210047,0,1.85089486865982,2.70308752059526,2.28661146104463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84186457989859,0.802577647298789,1.40558667435203,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.77976992559591,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.904980694530854,2.90911723833918,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.488105059607853,0.3755727921195,1.14681839138014,2.21858103073705,2.6080489235381,0,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,1.41696576325585,0.798169295285756,0.615349092722265,0.252071696221718,0.484100767249525,0.807378228159255,8.56616521554926,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55336444622308,1.56215619722769,0.826747186004736,0.760989722326882,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0,0,1.97112225632812,0.986591603442736,0,0,0,0.314231179832004,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35570160537934,1.78227840196252,3.3812458206672,0,0,0,0,0,0,0,0,0,3.15347082933193,0,1.01987235286372,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.803892390468535,2.48750831837634,2.27552590896169,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@URB1 | |||
}} |
Revision as of 13:22, 21 January 2014
Short description: | p3@URB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_URB1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -332bp_to_ENST00000492603_5end |
EntrezGene: | URB1 |
HGNC: | 17344 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.25e-19 | 10 |
melanoblast | 4.25e-19 | 10 |
pigment cell | 1.31e-13 | 14 |
neurecto-epithelial cell | 1.78e-09 | 20 |
dark melanocyte | 7.27e-09 | 1 |
columnar/cuboidal epithelial cell | 5.74e-07 | 27 |