FFCP PHASE1:Hg19::chr5:121413702..121413713,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6664 | |||
|TSSclassifier=strong | |||
|UniProt=B4DQF8 | |||
|association_with_transcript=240bp_to_ENST00000543620_5end | |||
|description=CAGE_peak_7_at_LOX_5end | |||
|id=chr5:121413702..121413713,- | |||
|ontology_enrichment_celltype=CL:0000055!4.41e-45!180;CL:0000057!1.11e-24!75;CL:0000680!2.98e-22!57;CL:0000056!2.98e-22!57;CL:0000355!2.98e-22!57;CL:0000187!1.53e-20!54;CL:0000192!4.89e-20!42;CL:0000514!4.89e-20!42;CL:0000222!5.16e-19!119;CL:0000183!6.64e-19!59;CL:0000393!1.55e-17!60;CL:0000211!1.55e-17!60;CL:0000359!6.93e-17!32;CL:0002620!2.84e-11!23;CL:0000048!3.26e-10!430;CL:0000723!1.82e-09!436;CL:0002334!8.88e-09!12;CL:0000144!1.90e-08!625;CL:0000034!2.74e-08!444;CL:0002371!1.09e-07!591;CL:0002494!1.34e-07!16;CL:0002539!2.56e-07!10;CL:0000220!5.95e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.66e-20;32!CL:0000192;1.27e-17;43!CL:0002620;1.51e-11;23!CL:0002334;8.54e-11;12!CL:0000187;3.34e-10;55!CL:0002539;7.24e-10;10!CL:0000048;1.55e-09;58!CL:0000134;2.02e-09;55!CL:0002494;7.85e-09;16!CL:0000723;2.32e-08;61!CL:0000393;2.80e-08;61!CL:0000211;2.80e-08;61!CL:0000057;3.52e-08;73!CL:0002320;1.22e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.22e-24,43;CL:0000514,1.22e-24,43;CL:0000057,2.00e-22,76;CL:0000680,3.16e-22,58;CL:0000056,3.16e-22,58;CL:0000355,3.16e-22,58;CL:0000359,1.95e-21,32;CL:0000048,4.16e-21,427;CL:0000723,3.60e-20,433;CL:0000187,5.82e-20,55;CL:0000034,5.74e-19,441;CL:0000393,1.23e-16,61;CL:0000211,1.23e-16,61;CL:0000222,3.01e-13,121;CL:0002620,1.48e-11,23;CL:0002334,6.98e-11,12;CL:0002539,5.71e-10,10;CL:0002494,1.17e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.27e-17;43!CL:0000355;4.19e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!3.00e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.51e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.17e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.94e-22!70;UBERON:0000914!2.66e-22!83;UBERON:0002329!2.66e-22!83;UBERON:0003077!2.66e-22!83;UBERON:0003059!2.66e-22!83;UBERON:0007282!2.66e-22!83;UBERON:0009618!2.66e-22!83;UBERON:0007285!2.66e-22!83;UBERON:0001134!5.25e-22!61;UBERON:0002036!5.25e-22!61;UBERON:0003082!5.25e-22!61;UBERON:0002385!3.38e-21!63;UBERON:0001015!3.38e-21!63;UBERON:0000383!3.38e-21!63;UBERON:0000486!1.60e-18!82;UBERON:0004872!1.63e-18!84;UBERON:0002049!1.32e-17!79;UBERON:0007798!1.32e-17!79;UBERON:0001637!1.42e-16!42;UBERON:0003509!1.42e-16!42;UBERON:0004572!1.42e-16!42;UBERON:0000055!7.94e-16!69;UBERON:0001981!1.94e-15!60;UBERON:0007500!1.94e-15!60;UBERON:0004537!1.94e-15!60;UBERON:0006965!1.94e-15!60;UBERON:0004535!1.30e-14!110;UBERON:0005256!3.45e-14!143;UBERON:0001009!6.85e-14!113;UBERON:0004573!7.12e-14!33;UBERON:0004571!7.12e-14!33;UBERON:0000490!8.23e-13!138;UBERON:0002100!1.03e-11!216;UBERON:0003914!3.01e-11!118;UBERON:0000475!8.92e-09!365;UBERON:0000947!2.50e-08!21;UBERON:0010191!2.50e-08!21;UBERON:0000948!1.08e-07!24;UBERON:0005498!1.08e-07!24;UBERON:0004140!1.08e-07!24;UBERON:0009881!1.08e-07!24;UBERON:0004141!1.08e-07!24;UBERON:0003084!1.08e-07!24;UBERON:0007005!1.08e-07!24;UBERON:0004139!1.08e-07!24;UBERON:0004291!1.08e-07!24;UBERON:0004237!2.56e-07!10;UBERON:0004695!2.56e-07!10;UBERON:0002111!2.56e-07!10;UBERON:0004178!2.56e-07!10;UBERON:0001135!3.01e-07!15;UBERON:0002199!6.43e-07!45;UBERON:0002416!6.43e-07!45;UBERON:0000119!6.65e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.91e-14;33!UBERON:0004571;7.91e-14;33!UBERON:0001637;5.98e-11;42!UBERON:0003509;5.98e-11;42!UBERON:0004572;5.98e-11;42!UBERON:0004237;7.24e-10;10!UBERON:0004695;7.24e-10;10!UBERON:0002111;7.24e-10;10!UBERON:0004178;7.24e-10;10!UBERON:0001135;2.89e-09;15!UBERON:0000947;1.15e-08;21!UBERON:0010191;1.15e-08;21!UBERON:0004457;9.07e-08;9!UBERON:0000042;9.07e-08;9!UBERON:0003688;1.69e-07;6!UBERON:0002358;1.69e-07;6!UBERON:0003684;1.69e-07;6!UBERON:0001178;1.69e-07;6!UBERON:0002384;1.88e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.74e-22,62;UBERON:0002036,6.74e-22,62;UBERON:0003082,6.74e-22,62;UBERON:0002329,4.77e-21,71;UBERON:0003059,4.77e-21,71;UBERON:0007282,4.77e-21,71;UBERON:0004290,4.77e-21,71;UBERON:0009618,4.77e-21,71;UBERON:0007524,5.01e-21,73;UBERON:0002385,1.02e-20,64;UBERON:0001015,1.02e-20,64;UBERON:0000383,1.02e-20,64;UBERON:0003077,1.60e-20,72;UBERON:0007285,1.60e-20,72;UBERON:0000486,1.09e-17,83;UBERON:0007503,1.10e-17,78;UBERON:0001637,5.42e-16,42;UBERON:0003509,5.42e-16,42;UBERON:0004572,5.42e-16,42;UBERON:0004573,1.46e-15,33;UBERON:0004571,1.46e-15,33;UBERON:0004872,2.11e-12,83;UBERON:0005256,1.38e-11,122;UBERON:0007500,1.28e-10,59;UBERON:0001981,1.28e-10,59;UBERON:0004537,1.28e-10,59;UBERON:0006965,1.28e-10,59;UBERON:0002049,1.59e-10,78;UBERON:0007798,1.59e-10,78;UBERON:0004237,5.71e-10,10;UBERON:0004695,5.71e-10,10;UBERON:0002111,5.71e-10,10;UBERON:0004178,5.71e-10,10;UBERON:0004535,5.83e-10,109;UBERON:0000055,6.34e-10,68;UBERON:0001135,2.01e-09,15;UBERON:0001009,2.56e-09,112;UBERON:0000490,3.75e-09,148;UBERON:0000947,9.13e-09,21;UBERON:0010191,9.13e-09,21;UBERON:0002199,1.06e-08,46;UBERON:0002416,1.06e-08,46;UBERON:0003104,1.47e-08,160;UBERON:0009142,1.47e-08,160;UBERON:0002097,5.93e-08,41;UBERON:0002100,9.18e-08,199;UBERON:0000926,9.79e-08,315;UBERON:0004120,9.79e-08,315;UBERON:0006603,9.79e-08,315;UBERON:0003688,1.51e-07,6;UBERON:0002358,1.51e-07,6;UBERON:0003684,1.51e-07,6;UBERON:0001178,1.51e-07,6;UBERON:0002384,8.44e-07,371 | |||
|phase1_expression=12.1724514111273,8.99222200342129,7.61153782118244,12.0087958023756,4.91657203870017,10.4680622892044,0,1.89515962028049,0.261185628199839,0.737201809504527,0,0,0,0.247532705920093,1.32558950291166,6.05092631806598,7.8350288643117,8.03341099426111,3.90346239032406,0.369363174230364,1.63200552995402,1.88072832886853,1.14494394852423,1.36874425072884,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.68280343881454,3.45228916977532,3.61439152384566,3.50936537445123,7.09747942908036,0.795285947051099,4.86634870302636,0.283604451492204,0.221729397462564,1.84453049955565,0.196468613246569,0,0,0,0,0,0,0,0,0.79504962946682,1.72046919021225,0.347140501607594,0,0.838998872419812,0.275118041940067,0.626984899610432,2.06733407335463,2.13459757612026,4.68608857870538,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.535798369704479,0.44905874525234,0.563057402416611,0,0,0.549605231791222,0,0,0,14.4121865991642,9.49728837484348,130.423043101021,19.2180535901705,6.38403087957043,5.04609840128076,2.1349799145941,6.90669135568048,3.11211035399766,0.808264032418128,0.163461903113459,0.908144565869588,0,0.70296429550139,3.74592092196385,2.2818872861778,2.24173020827702,0.822041490506354,0.485618833104395,0.842704840213491,0.816616685019573,0.122834317311768,0.206651562351531,4.75201142912821,4.45080472701402,0.910161361938026,0.718618141816238,0.336672227908132,0,1.93944880838928,3.95079858792754,6.43624371177941,10.9673783001816,1.58805056424029,7.35497506324334,5.33893472046419,5.08636562782948,15.0045548042201,2.88547081867629,5.41045134095821,10.7947776672322,47.2573730275545,5.55390929418832,3.78650661366172,4.69454483075727,1.77810662500693,23.4306331060965,3.32481924151213,5.25637836162512,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,6.03678306441573,25.9876613401051,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,4.28919525746314,0,0,0.100528972411631,0,0.651616610620649,0,1.44331342025273,0.927443239800615,9.27528684462991,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.448524337381443,0.87192013766656,0.7333828582095,20.8127462370022,7.15312891703765,2.535908257668,5.58470044828228,5.2003718455683,1.02882949704857,0,0.799266537048298,2.14466990487221,1.62786481617433,0.823240336780769,1.30294473717494,2.48774364119782,0.791951872933429,8.44030255766841,8.71533458600294,9.39746117111336,0,0,0,12.4604924855623,1.14861935834114,0,69.0606832804353,2.4657158706046,7.34149949283572,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.981531933753119,1.00034104211935,0.271265023699736,2.28767947683888,5.17444067511769,2.36553622550902,3.86566669475954,13.5425744877474,11.3703752027992,3.10419213877515,7.3064815838898,7.19039757312642,4.17041349446798,0.195801157462741,0,0,0,0,0,0,0.604780586659361,20.0967324333209,12.4304198363331,15.7169652882521,34.8538485975507,17.9097537173346,35.7095704938809,16.325987308949,2.92998418225046,10.4761417934745,7.39144404124282,0.519254429183621,4.53220475993841,0.120859449591622,0.200506470303285,0,1.60740227430449,2.91345868810747,5.90059867317409,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0.984043937099117,0.650756789328606,0.103041011647722,0,0,0,0,30.5299466703903,0.096670718292122,0.462145851343933,0.307007349452259,0.137836572484531,0.859361958946189,0.290033387828457,0.681813019328807,0.712256285173899,0.165284915360978,0,0,0.10115778085555,6.97268323945929,205.572462480408,4.8792608911242,4.92853728281742,12.2430386972915,4.34966496037536,3.15051172476664,6.72686967687359,1.48863347743867,3.79655309662471,4.38449446024797,1.27948895655667,2.99557291623744,5.72765846266686,0.78494864019923,2.51821440616641,2.74537029736055,2.70968525395079,11.524401449679,9.5106192703805,2.10629228119491,0.48763373908959,6.09283724078211,1.05650146756755,2.72999822815972,7.35308246159306,4.52032466480971,6.61638412255349,3.3171948762061,11.8381739018516,2.89387767133344,1.9676842561399,5.68149055495571,2.478587984798,0.845086807596724,2.86822704408103,2.06322986127554,11.4134736474,0.709522128141196,9.28873595309722,3.95153871551882,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,1.55832187032068,0,0,0.398495976502139,0,0,0.102268682502155,0,32.348117116828,0,0,0,0.591860433821602,0,8.89095921157095,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,1.25481369850743,0.461701551022782,0.227884111694002,0,0,0,0.31900115973192,2.656330208654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| |||
|short_description=p7@LOX | |||
}} |
Revision as of 07:05, 22 January 2014
Short description: | p7@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LOX_5end |
Coexpression cluster: | NA |
Association with transcript: | 240bp_to_ENST00000543620_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | B4DQF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.22e-24 | 43 |
smooth muscle myoblast | 1.22e-24 | 43 |
fibroblast | 2.00e-22 | 76 |
muscle precursor cell | 3.16e-22 | 58 |
myoblast | 3.16e-22 | 58 |
multi-potent skeletal muscle stem cell | 3.16e-22 | 58 |
vascular associated smooth muscle cell | 1.95e-21 | 32 |
multi fate stem cell | 4.16e-21 | 427 |
somatic stem cell | 3.60e-20 | 433 |
muscle cell | 5.82e-20 | 55 |
stem cell | 5.74e-19 | 441 |
electrically responsive cell | 1.23e-16 | 61 |
electrically active cell | 1.23e-16 | 61 |
mesodermal cell | 3.01e-13 | 121 |
skin fibroblast | 1.48e-11 | 23 |
preadipocyte | 6.98e-11 | 12 |
aortic smooth muscle cell | 5.71e-10 | 10 |
cardiocyte | 1.17e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.17e-10 | 14 |