FFCP PHASE1:Hg19::chr6:118228657..118228715,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21483 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T1Q4 | |||
|association_with_transcript=0bp_to_ENST00000360388,NM_001029858,uc003pxx.3_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SLC35F1_5end | |||
|id=chr6:118228657..118228715,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.17e-09!8;CL:0002319!1.15e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.09e-10;3!CL:0000047;1.45e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.17e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.97e-16;82!UBERON:0010122;1.10e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.14e-66!86;UBERON:0001017!3.09e-66!82;UBERON:0000073!1.88e-64!94;UBERON:0001016!1.88e-64!94;UBERON:0001049!5.39e-62!57;UBERON:0005068!5.39e-62!57;UBERON:0006241!5.39e-62!57;UBERON:0007135!5.39e-62!57;UBERON:0007023!7.76e-53!115;UBERON:0000955!6.73e-52!69;UBERON:0006238!6.73e-52!69;UBERON:0002616!1.24e-51!59;UBERON:0003075!6.64e-51!86;UBERON:0007284!6.64e-51!86;UBERON:0002346!1.49e-49!90;UBERON:0001893!1.69e-49!34;UBERON:0002020!2.30e-49!34;UBERON:0003528!2.30e-49!34;UBERON:0002791!7.44e-48!33;UBERON:0001869!4.92e-47!32;UBERON:0002780!6.91e-47!41;UBERON:0001890!6.91e-47!41;UBERON:0006240!6.91e-47!41;UBERON:0003080!1.81e-45!42;UBERON:0000956!5.73e-37!25;UBERON:0000203!5.73e-37!25;UBERON:0003056!5.44e-36!61;UBERON:0004121!6.47e-36!169;UBERON:0000924!1.08e-35!173;UBERON:0006601!1.08e-35!173;UBERON:0002619!1.16e-32!22;UBERON:0000033!5.30e-32!123;UBERON:0000153!6.72e-32!129;UBERON:0007811!6.72e-32!129;UBERON:0001950!4.79e-30!20;UBERON:0003076!5.94e-17!15;UBERON:0003057!5.94e-17!15;UBERON:0004732!1.99e-14!13;UBERON:0000025!4.96e-14!194;UBERON:0002420!9.18e-14!9;UBERON:0007245!9.18e-14!9;UBERON:0010009!9.18e-14!9;UBERON:0010011!9.18e-14!9;UBERON:0000454!9.18e-14!9;UBERON:0002308!1.32e-13!9;UBERON:0000125!1.32e-13!9;UBERON:0004733!3.31e-13!12;UBERON:0002028!3.31e-13!12;UBERON:0007277!3.31e-13!12;UBERON:0000064!5.92e-13!219;UBERON:0004111!5.43e-11!241;UBERON:0009663!5.70e-11!7;UBERON:0000200!6.61e-11!6;UBERON:0001871!3.42e-10!7;UBERON:0002680!1.83e-09!9;UBERON:0001895!1.83e-09!9;UBERON:0010092!1.83e-09!9;UBERON:0002021!2.21e-09!5;UBERON:0001872!2.82e-09!5;UBERON:0000477!3.94e-09!286;UBERON:0002298!4.11e-09!8;UBERON:0000349!1.67e-08!5;UBERON:0000922!2.14e-08!612;UBERON:0000475!6.82e-08!365;UBERON:0000481!1.87e-07!347;UBERON:0000369!2.34e-07!4;UBERON:0002435!2.34e-07!4;UBERON:0000204!2.34e-07!4;UBERON:0010082!2.34e-07!4;UBERON:0000483!2.78e-07!309;UBERON:0000119!4.76e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.31e-84;32!UBERON:0003528;6.36e-82;34!UBERON:0002020;6.36e-82;34!UBERON:0002791;3.40e-79;32!UBERON:0000956;1.41e-77;25!UBERON:0000203;1.41e-77;25!UBERON:0001893;1.66e-76;34!UBERON:0002619;2.49e-68;22!UBERON:0001950;1.06e-62;20!UBERON:0002780;8.27e-58;41!UBERON:0001890;8.27e-58;41!UBERON:0000073;4.66e-49;53!UBERON:0002616;4.66e-49;53!UBERON:0001017;4.57e-38;75!UBERON:0000955;5.35e-38;68!UBERON:0001016;3.05e-30;83!UBERON:0000200;2.85e-21;6!UBERON:0002298;2.80e-18;6!UBERON:0002021;4.37e-18;5!UBERON:0001872;5.75e-18;5!UBERON:0002420;2.24e-17;9!UBERON:0007245;2.24e-17;9!UBERON:0010009;2.24e-17;9!UBERON:0010011;2.24e-17;9!UBERON:0000454;2.24e-17;9!UBERON:0001871;2.71e-17;6!UBERON:0000125;3.89e-17;9!UBERON:0002308;3.89e-17;9!UBERON:0000349;2.86e-16;5!UBERON:0004732;5.19e-14;13!UBERON:0000369;6.53e-14;4!UBERON:0002435;6.53e-14;4!UBERON:0000204;6.53e-14;4!UBERON:0007023;1.40e-12;114!UBERON:0009663;7.28e-12;7!UBERON:0004733;8.24e-12;12!UBERON:0002028;8.24e-12;12!UBERON:0001870;2.19e-11;3!UBERON:0011216;3.33e-11;132!UBERON:0005383;9.71e-11;3!UBERON:0005382;9.71e-11;3!UBERON:0000988;3.77e-10;3!UBERON:0001896;7.61e-10;3!UBERON:0005290;7.61e-10;3!UBERON:0002771;3.43e-08;2!UBERON:0002702;4.69e-08;2!UBERON:0001873;1.10e-07;2!UBERON:0001876;1.32e-07;2!UBERON:0010314;2.06e-07;132!UBERON:0002148;2.71e-07;2!UBERON:0006331;2.71e-07;2!UBERON:0009662;2.71e-07;2!UBERON:0001954;3.57e-07;2!UBERON:0003022;3.57e-07;2!UBERON:0002421;3.57e-07;2!UBERON:0002600;3.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.74e-94,56;UBERON:0005068,1.74e-94,56;UBERON:0006241,1.74e-94,56;UBERON:0007135,1.74e-94,56;UBERON:0001869,2.15e-93,32;UBERON:0003528,8.41e-93,34;UBERON:0002020,8.41e-93,34;UBERON:0000073,1.29e-90,53;UBERON:0002616,1.29e-90,53;UBERON:0001017,1.40e-90,81;UBERON:0001893,1.43e-87,34;UBERON:0001016,2.01e-87,89;UBERON:0002791,6.22e-87,32;UBERON:0002780,5.55e-81,41;UBERON:0001890,5.55e-81,41;UBERON:0003080,5.55e-81,41;UBERON:0006240,5.55e-81,41;UBERON:0000955,1.90e-79,68;UBERON:0006238,1.90e-79,68;UBERON:0000956,1.43e-77,25;UBERON:0000203,1.43e-77,25;UBERON:0002619,2.35e-68,22;UBERON:0003075,6.23e-68,82;UBERON:0007284,6.23e-68,82;UBERON:0002346,2.62e-64,86;UBERON:0001950,9.19e-63,20;UBERON:0003056,1.11e-58,61;UBERON:0010371,2.03e-51,104;UBERON:0004121,1.68e-42,171;UBERON:0000924,1.68e-42,171;UBERON:0006601,1.68e-42,171;UBERON:0010314,1.66e-40,132;UBERON:0007023,2.73e-39,114;UBERON:0011216,4.70e-36,223;UBERON:0000025,9.98e-22,192;UBERON:0000200,2.40e-21,6;UBERON:0002298,2.72e-18,6;UBERON:0002021,4.08e-18,5;UBERON:0001872,6.83e-18,5;UBERON:0002420,2.61e-17,9;UBERON:0007245,2.61e-17,9;UBERON:0010009,2.61e-17,9;UBERON:0010011,2.61e-17,9;UBERON:0000454,2.61e-17,9;UBERON:0001871,2.68e-17,6;UBERON:0000125,4.76e-17,9;UBERON:0002308,4.76e-17,9;UBERON:0000349,2.96e-16,5;UBERON:0004111,2.53e-15,240;UBERON:0003076,2.61e-15,15;UBERON:0003057,2.61e-15,15;UBERON:0004732,5.29e-14,13;UBERON:0000369,7.72e-14,4;UBERON:0002435,7.72e-14,4;UBERON:0000204,7.72e-14,4;UBERON:0010082,7.72e-14,4;UBERON:0004733,8.03e-12,12;UBERON:0002028,8.03e-12,12;UBERON:0007277,8.03e-12,12;UBERON:0009663,8.76e-12,7;UBERON:0001870,1.82e-11,3;UBERON:0000483,2.52e-11,306;UBERON:0000119,4.09e-11,309;UBERON:0005383,1.13e-10,3;UBERON:0005382,1.13e-10,3;UBERON:0000988,3.43e-10,3;UBERON:0001896,8.12e-10,3;UBERON:0005290,8.12e-10,3;UBERON:0010096,8.12e-10,3;UBERON:0000923,1.70e-09,560;UBERON:0010316,1.70e-09,560;UBERON:0005291,1.70e-09,560;UBERON:0006598,1.70e-09,560;UBERON:0010317,1.70e-09,560;UBERON:0002532,1.70e-09,560;UBERON:0002050,2.45e-09,564;UBERON:0000922,5.95e-09,592;UBERON:0005423,1.10e-08,581;UBERON:0002771,3.38e-08,2;UBERON:0002702,4.02e-08,2;UBERON:0001873,1.19e-07,2;UBERON:0010122,1.19e-07,2;UBERON:0001876,1.23e-07,2;UBERON:0002148,2.71e-07,2;UBERON:0006331,2.71e-07,2;UBERON:0009662,2.71e-07,2;UBERON:0001954,3.87e-07,2;UBERON:0003022,3.87e-07,2;UBERON:0002421,3.87e-07,2;UBERON:0002600,3.87e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0.626909442956176,4.29353980696585,2.6006140763848,5.14724822338691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97081688457631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0.381988425558278,0,0,0.205654985406647,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57370323600434,2.60279707715243,0,0.502548796003046,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,3.97659059106519,3.51673541026282,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,11.6319929531426,5.75162208603478,3.99227596002388,0,0,0,0,0,0,0.344743373241465,0.583209226766509,0.694499979733169,4.42870692906919,3.25610384288601,1.52581736317083,0.774054819518572,0.295547618953547,2.85201016300164,0,0,0.230850775511391,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0.208843899010911,0.808813595768125,0,1.87411556580271,0,0,0,0,0,3.36680037793539,0.31593289814244,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.80784592624426,0.137041924646751,0,8.99013302573478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.684526894459965,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,1.59045937961861,2.04305109167363,0.482259445395058,0.412618309791701,2.9080823662043,0,0,6.74320078904074,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,3.36135686540031,1.58679122091228,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,7.97461361970287,8.78589107294135,5.88397374320549,2.29363678276028,1.44207766997908,1.61450647647597,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22162962682788,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,1.15104934173287,0,0.786329709279482,0,0,0.425149840203366,0,0,0,0,0,0,0,6.10177638416365,9.91876034279095,4.62938191265739,8.61488729811171,12.6035848110859,7.12319700381444,7.2664040534333,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0.225630985047772,0,0,0,0,0,9.52279943119365,7.02970288752463,5.78723030203315,9.00504504753477,6.01672289920042,0.548257766857182,1.48863353516788,0,0,0,0.672567444437648,0,0,0,0,0,2.7867590520501,9.01086997811032,0,0,0.156986185701028,4.24212092773205,0,2.73947616152849,0,0,0.571812353413251,0.632054446930906,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0.109940516745429,0,0.0771741581079447,0.437119121007915,0,0,0,1.37415926980462,0.594092800654172,5.0718687310008,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0.716697915757256,0,7.07111497985513,7.41796173578642,0,0,0,0,0.630832124175395,0.437062287854782,0,0.101988829741982,0,0,0,0.151557396436479,0,0,1.13776295448085,0,0.476128862927481,0,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0,0,1.33064142618405,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |||
|short_description=p2@SLC35F1 | |||
}} |
Revision as of 13:35, 22 January 2014
Short description: | p2@SLC35F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC35F1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000360388, NM_001029858, uc003pxx.3_5end |
EntrezGene: | SLC35F1 |
HGNC: | 21483 |
UniProt: | Q5T1Q4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.17e-10 | 3 |