FFCP PHASE1:Hg19::chr7:93515962..93515978,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93515962..93515978,- | |||
|id=chr7:93515962..93515978,- | |||
|ontology_enrichment_celltype=CL:0000680!2.03e-21!57;CL:0000056!2.03e-21!57;CL:0000355!2.03e-21!57;CL:0000192!9.71e-21!42;CL:0000514!9.71e-21!42;CL:0000187!3.17e-20!54;CL:0000359!4.40e-20!32;CL:0000183!9.28e-19!59;CL:0000393!4.17e-17!60;CL:0000211!4.17e-17!60;CL:0000222!9.06e-14!119;CL:0000055!2.04e-13!180;CL:0002494!2.68e-09!16;CL:0002595!1.25e-08!5;CL:0000220!4.07e-07!246;CL:0002321!6.17e-07!248;CL:0002539!9.30e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.23e-30;32!CL:0002595;6.73e-22;5!CL:0000192;2.96e-16;43!CL:0002592;1.77e-14;3!CL:0000187;1.96e-10;55!CL:0002593;5.19e-10;2!CL:0002494;2.45e-09;16!CL:0000393;1.14e-08;61!CL:0000211;1.14e-08;61!CL:0002539;4.21e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.69e-31,32;CL:0000192,2.67e-22,43;CL:0000514,2.67e-22,43;CL:0002595,6.21e-22,5;CL:0000187,7.98e-19,55;CL:0000680,1.22e-17,58;CL:0000056,1.22e-17,58;CL:0000355,1.22e-17,58;CL:0000393,1.42e-16,61;CL:0000211,1.42e-16,61;CL:0002592,1.78e-14,3;CL:0002593,5.81e-10,2;CL:0002494,2.97e-09,16;CL:0000222,1.89e-08,121;CL:0002539,4.57e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.96e-16;43!CL:0000355;6.35e-10;58!UBERON:0005795;5.53e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!2.91e-11!14;DOID:0060072!4.89e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0060072;4.79e-17;4!DOID:2394;2.95e-14;14!DOID:0060084;2.23e-13;3!DOID:127;2.23e-13;3!DOID:120;4.76e-09;27!DOID:193;2.46e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,2.35e-17,4;DOID:2394,2.62e-14,14;DOID:0060084,1.77e-13,3;DOID:127,1.77e-13,3;DOID:120,4.53e-09,27;DOID:193,2.35e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.63e-21!70;UBERON:0000486!2.20e-20!82;UBERON:0001134!3.03e-19!61;UBERON:0002036!3.03e-19!61;UBERON:0003082!3.03e-19!61;UBERON:0001637!3.57e-19!42;UBERON:0003509!3.57e-19!42;UBERON:0004572!3.57e-19!42;UBERON:0000914!5.52e-19!83;UBERON:0002329!5.52e-19!83;UBERON:0003077!5.52e-19!83;UBERON:0003059!5.52e-19!83;UBERON:0007282!5.52e-19!83;UBERON:0009618!5.52e-19!83;UBERON:0007285!5.52e-19!83;UBERON:0004872!1.07e-18!84;UBERON:0002385!2.88e-18!63;UBERON:0001015!2.88e-18!63;UBERON:0000383!2.88e-18!63;UBERON:0001981!1.83e-17!60;UBERON:0007500!1.83e-17!60;UBERON:0004537!1.83e-17!60;UBERON:0006965!1.83e-17!60;UBERON:0000490!3.10e-17!138;UBERON:0004573!4.33e-17!33;UBERON:0004571!4.33e-17!33;UBERON:0002049!1.10e-16!79;UBERON:0007798!1.10e-16!79;UBERON:0000055!4.75e-16!69;UBERON:0004535!2.71e-15!110;UBERON:0001009!1.64e-14!113;UBERON:0005256!1.40e-13!143;UBERON:0003914!2.70e-12!118;UBERON:0002100!1.23e-11!216;UBERON:0000483!6.37e-11!309;UBERON:0000119!1.33e-10!312;UBERON:0000992!9.92e-10!13;UBERON:0000926!4.51e-09!448;UBERON:0004120!4.51e-09!448;UBERON:0006603!4.51e-09!448;UBERON:0003104!5.80e-09!238;UBERON:0009142!5.80e-09!238;UBERON:0003834!1.25e-08!5;UBERON:0001533!1.25e-08!5;UBERON:0001135!1.03e-07!15;UBERON:0000948!2.13e-07!24;UBERON:0005498!2.13e-07!24;UBERON:0004140!2.13e-07!24;UBERON:0009881!2.13e-07!24;UBERON:0004141!2.13e-07!24;UBERON:0003084!2.13e-07!24;UBERON:0007005!2.13e-07!24;UBERON:0004139!2.13e-07!24;UBERON:0004291!2.13e-07!24;UBERON:0002119!3.80e-07!4;UBERON:0004531!3.80e-07!4;UBERON:0003513!7.83e-07!8;UBERON:0004237!9.30e-07!10;UBERON:0004695!9.30e-07!10;UBERON:0002111!9.30e-07!10;UBERON:0004178!9.30e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.37e-22;33!UBERON:0004571;1.37e-22;33!UBERON:0003834;6.73e-22;5!UBERON:0001533;6.73e-22;5!UBERON:0001637;4.30e-18;42!UBERON:0003509;4.30e-18;42!UBERON:0004572;4.30e-18;42!UBERON:0003513;1.44e-15;7!UBERON:0003498;1.77e-14;3!UBERON:0005985;1.77e-14;3!UBERON:0001621;1.77e-14;3!UBERON:0000992;1.42e-11;13!UBERON:0002119;6.55e-11;4!UBERON:0007500;1.17e-10;56!UBERON:0001981;1.17e-10;56!UBERON:0004537;1.17e-10;56!UBERON:0002456;5.19e-10;2!UBERON:0000055;6.03e-10;65!UBERON:0002118;4.25e-08;5!UBERON:0003134;4.87e-08;33!UBERON:0002049;8.24e-08;75!UBERON:0007798;8.24e-08;75!UBERON:0000474;1.68e-07;37!UBERON:0003914;2.97e-07;74!UBERON:0004237;4.21e-07;10!UBERON:0004695;4.21e-07;10!UBERON:0002111;4.21e-07;10!UBERON:0004178;4.21e-07;10!UBERON:0000991;6.56e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.85e-26,33;UBERON:0004571,2.85e-26,33;UBERON:0001637,7.26e-26,42;UBERON:0003509,7.26e-26,42;UBERON:0004572,7.26e-26,42;UBERON:0007500,5.89e-22,59;UBERON:0001981,5.89e-22,59;UBERON:0004537,5.89e-22,59;UBERON:0006965,5.89e-22,59;UBERON:0003834,6.21e-22,5;UBERON:0001533,6.21e-22,5;UBERON:0004872,6.92e-22,83;UBERON:0000055,1.94e-18,68;UBERON:0001134,3.06e-16,62;UBERON:0002036,3.06e-16,62;UBERON:0003082,3.06e-16,62;UBERON:0002385,1.31e-15,64;UBERON:0001015,1.31e-15,64;UBERON:0000383,1.31e-15,64;UBERON:0003513,1.36e-15,7;UBERON:0002049,1.72e-15,78;UBERON:0007798,1.72e-15,78;UBERON:0002329,1.78e-15,71;UBERON:0003059,1.78e-15,71;UBERON:0007282,1.78e-15,71;UBERON:0004290,1.78e-15,71;UBERON:0009618,1.78e-15,71;UBERON:0003077,3.36e-15,72;UBERON:0007285,3.36e-15,72;UBERON:0007524,6.20e-15,73;UBERON:0001621,1.78e-14,3;UBERON:0004535,8.45e-14,109;UBERON:0007503,1.05e-13,78;UBERON:0001009,2.73e-13,112;UBERON:0000486,1.26e-12,83;UBERON:0003914,1.68e-12,117;UBERON:0000992,1.50e-11,13;UBERON:0002119,6.79e-11,4;UBERON:0002456,5.81e-10,2;UBERON:0003134,8.69e-10,37;UBERON:0000474,8.69e-10,37;UBERON:0000926,1.49e-09,315;UBERON:0004120,1.49e-09,315;UBERON:0006603,1.49e-09,315;UBERON:0003498,7.51e-09,5;UBERON:0005985,7.51e-09,5;UBERON:0003100,1.20e-08,41;UBERON:0002118,4.42e-08,5;UBERON:0003081,4.80e-08,203;UBERON:0000490,7.16e-08,148;UBERON:0005256,2.68e-07,122;UBERON:0003133,4.09e-07,48;UBERON:0004237,4.57e-07,10;UBERON:0004695,4.57e-07,10;UBERON:0002111,4.57e-07,10;UBERON:0004178,4.57e-07,10;UBERON:0000991,6.75e-07,21;UBERON:0009196,6.75e-07,21;UBERON:0009117,6.75e-07,21;UBERON:0005564,6.75e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0.123766352960047,0,2.01697543935533,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,4.56163263431108,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0,0.286836620748814,1.06400514659507,0,1.06748995729705,0,0.311211035399766,0.67355336034844,0.980771418680752,0.454072282934794,0,0,0.936480230490962,1.71141546463335,0.597794722207204,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0.600952235626387,0.567160915800105,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0.845302752556,0.531876233169741,0,0,1.41849132023278,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.482561763430822,0,0.616838775210622,0,0.164254312027618,2.59627214591811,0.232420756919918,0,0.200506470303285,0.0920809889358963,0.229628896329213,0.728364672026868,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0,0.382838137483752,0,0,0,2.0911118104818,0.924100740528266,2.12922412126809,2.60979897622522,5.00375391580584,0.429374660225974,0,0.632758849437452,0.762520775695299,0,0,0,1.56989728039846,0.179872457583315,0.274537029736055,0.471249609382746,4.04364963146632,4.75530963519025,8.42516912477962,0,7.06769119930725,2.11300293513511,0,0.989838023675989,0,1.65409603063837,3.98063385144732,3.5076070820301,0,0,1.82619339266434,0.30982349809975,2.25356482025793,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,1.08890984861323,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,1.55832187032068,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40728582029699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,1.9871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.35857467866569,0,0,0,0,2.17199840701485,1.72844298240254,2.28611152076586,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,1.10961172300523,0.189403005275089,0,0,0.228840068396924,0,0.777186002913902,4.43565449968902,4.46030948058367,0.899606224327209,3.10525913752519,18.2470731449976,1.86089200190596,0,0.450772826991655,0,3.25496586563729,1.09109195521536,1.8259794697223,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,2.57236873471653,0,0,0,0,0,0.111231401892069,0,0,0,0,1.94334832096759,0,0.0714765441766563,0,0.464965701472501,0,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0,1.76447435857846,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0.106727345877715,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:93515962..93515978,- | |||
}} |
Revision as of 17:53, 22 January 2014
Short description: | p@chr7:93515962..93515978, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93515962..93515978, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.69e-31 | 32 |
smooth muscle cell | 2.67e-22 | 43 |
smooth muscle myoblast | 2.67e-22 | 43 |
smooth muscle cell of the subclavian artery | 6.21e-22 | 5 |
muscle cell | 7.98e-19 | 55 |
muscle precursor cell | 1.22e-17 | 58 |
myoblast | 1.22e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-17 | 58 |
electrically responsive cell | 1.42e-16 | 61 |
electrically active cell | 1.42e-16 | 61 |
smooth muscle cell of the coronary artery | 1.78e-14 | 3 |
smooth muscle cell of the internal thoracic artery | 5.81e-10 | 2 |
cardiocyte | 2.97e-09 | 16 |
mesodermal cell | 1.89e-08 | 121 |
aortic smooth muscle cell | 4.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 2.35e-17 | 4 |
ovarian cancer | 2.62e-14 | 14 |
cell type benign neoplasm | 1.77e-13 | 3 |
leiomyoma | 1.77e-13 | 3 |
female reproductive organ cancer | 4.53e-09 | 27 |
reproductive organ cancer | 2.35e-08 | 29 |