FFCP PHASE1:Hg19::chr7:108096822..108096889,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |||
|TSSclassifier=strong | |||
|UniProt=F8W775,Q92823,F8W774,C9JYY6,E9PF33,F5GYD3,B7Z670,E9PDA4,Q14BM2 | |||
|association_with_transcript=0bp_to_ENST00000379022,ENST00000379028,ENST00000379032,ENST00000413765,ENST00000445979,ENST00000537765,NM_001193582,NM_001193583,NM_001193584,NM_005010,uc003vfb.2,uc003vfc.2,uc003vfd.2,uc003vfe.2,uc011kmk.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_NRCAM_5end | |||
|id=chr7:108096822..108096889,- | |||
|ontology_enrichment_celltype=CL:0002139!1.36e-09!24;CL:0000071!4.08e-08!18;CL:0002546!4.08e-08!18;CL:0002321!6.63e-07!248;CL:0000220!7.66e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.76e-10;24!CL:0000071;1.15e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.57e-10,24;CL:0000071,1.04e-08,18;CL:0002546,1.04e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.15e-08;18!UBERON:0006601;2.70e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.19e-34!194;UBERON:0001049!1.30e-33!57;UBERON:0005068!1.30e-33!57;UBERON:0006241!1.30e-33!57;UBERON:0007135!1.30e-33!57;UBERON:0004111!2.05e-31!241;UBERON:0001017!3.52e-31!82;UBERON:0000073!4.11e-29!94;UBERON:0001016!4.11e-29!94;UBERON:0005743!8.14e-29!86;UBERON:0002616!2.22e-28!59;UBERON:0000955!2.04e-27!69;UBERON:0006238!2.04e-27!69;UBERON:0000483!1.31e-26!309;UBERON:0002780!1.57e-26!41;UBERON:0001890!1.57e-26!41;UBERON:0006240!1.57e-26!41;UBERON:0003080!1.70e-26!42;UBERON:0000119!1.58e-25!312;UBERON:0000477!2.25e-25!286;UBERON:0003075!3.52e-25!86;UBERON:0007284!3.52e-25!86;UBERON:0002346!4.33e-23!90;UBERON:0001893!5.50e-23!34;UBERON:0002020!6.64e-23!34;UBERON:0003528!6.64e-23!34;UBERON:0002791!2.81e-22!33;UBERON:0004121!2.88e-22!169;UBERON:0000033!5.33e-22!123;UBERON:0001869!5.96e-22!32;UBERON:0000153!3.91e-21!129;UBERON:0007811!3.91e-21!129;UBERON:0000924!4.60e-21!173;UBERON:0006601!4.60e-21!173;UBERON:0000475!1.14e-20!365;UBERON:0003056!1.34e-19!61;UBERON:0007023!2.48e-19!115;UBERON:0000956!7.60e-18!25;UBERON:0000203!7.60e-18!25;UBERON:0002619!7.35e-16!22;UBERON:0001950!1.67e-14!20;UBERON:0000468!2.23e-14!659;UBERON:0000467!1.99e-13!625;UBERON:0000481!2.34e-13!347;UBERON:0000480!3.69e-13!626;UBERON:0004872!4.56e-13!84;UBERON:0000922!5.86e-13!612;UBERON:0002050!4.95e-12!605;UBERON:0005423!4.95e-12!605;UBERON:0000064!5.68e-12!219;UBERON:0000923!9.18e-12!604;UBERON:0005291!9.18e-12!604;UBERON:0006598!9.18e-12!604;UBERON:0002532!9.18e-12!604;UBERON:0001981!2.52e-11!60;UBERON:0007500!2.52e-11!60;UBERON:0004537!2.52e-11!60;UBERON:0006965!2.52e-11!60;UBERON:0000055!4.87e-11!69;UBERON:0002049!3.22e-10!79;UBERON:0007798!3.22e-10!79;UBERON:0001637!1.04e-09!42;UBERON:0003509!1.04e-09!42;UBERON:0004572!1.04e-09!42;UBERON:0004535!7.51e-09!110;UBERON:0004573!2.65e-08!33;UBERON:0004571!2.65e-08!33;UBERON:0003076!2.96e-08!15;UBERON:0003057!2.96e-08!15;UBERON:0001009!3.08e-08!113;UBERON:0003914!3.16e-08!118;UBERON:0001986!4.08e-08!18;UBERON:0004638!4.08e-08!18;UBERON:0004852!4.08e-08!18;UBERON:0004732!6.37e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.96e-22;32!UBERON:0001893;1.12e-21;34!UBERON:0003528;1.54e-21;34!UBERON:0002020;1.54e-21;34!UBERON:0002791;1.65e-21;32!UBERON:0002780;7.60e-21;41!UBERON:0001890;7.60e-21;41!UBERON:0000073;5.53e-20;53!UBERON:0002616;5.53e-20;53!UBERON:0000956;2.41e-19;25!UBERON:0000203;2.41e-19;25!UBERON:0002619;3.55e-17;22!UBERON:0001950;1.07e-15;20!UBERON:0000955;2.73e-13;68!UBERON:0001017;6.41e-13;75!UBERON:0001016;2.90e-12;83!UBERON:0004638;1.15e-08;18!UBERON:0001986;1.15e-08;18!UBERON:0004852;1.15e-08;18!UBERON:0004573;3.31e-08;33!UBERON:0004571;3.31e-08;33!UBERON:0001637;3.97e-08;42!UBERON:0003509;3.97e-08;42!UBERON:0004572;3.97e-08;42!UBERON:0004732;2.26e-07;13!UBERON:0002420;3.37e-07;9!UBERON:0007245;3.37e-07;9!UBERON:0010009;3.37e-07;9!UBERON:0010011;3.37e-07;9!UBERON:0000454;3.37e-07;9!UBERON:0004733;4.08e-07;12!UBERON:0002028;4.08e-07;12!UBERON:0000125;5.68e-07;9!UBERON:0002308;5.68e-07;9!UBERON:0007023;6.96e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.61e-36,56;UBERON:0005068,1.61e-36,56;UBERON:0006241,1.61e-36,56;UBERON:0007135,1.61e-36,56;UBERON:0000073,1.16e-34,53;UBERON:0002616,1.16e-34,53;UBERON:0000025,4.09e-34,192;UBERON:0004111,4.11e-32,240;UBERON:0001016,2.04e-31,89;UBERON:0001017,2.22e-31,81;UBERON:0003075,1.40e-29,82;UBERON:0007284,1.40e-29,82;UBERON:0010371,4.56e-29,104;UBERON:0002780,8.71e-29,41;UBERON:0001890,8.71e-29,41;UBERON:0003080,8.71e-29,41;UBERON:0006240,8.71e-29,41;UBERON:0000955,1.60e-28,68;UBERON:0006238,1.60e-28,68;UBERON:0000483,6.56e-28,306;UBERON:0002346,3.87e-27,86;UBERON:0000119,7.83e-27,309;UBERON:0010314,5.32e-26,132;UBERON:0001893,6.40e-25,34;UBERON:0003528,7.86e-25,34;UBERON:0002020,7.86e-25,34;UBERON:0001869,8.61e-24,32;UBERON:0002791,1.59e-23,32;UBERON:0004121,5.91e-23,171;UBERON:0000924,5.91e-23,171;UBERON:0006601,5.91e-23,171;UBERON:0003056,1.46e-21,61;UBERON:0000956,2.59e-19,25;UBERON:0000203,2.59e-19,25;UBERON:0007023,1.85e-17,114;UBERON:0002619,3.79e-17,22;UBERON:0001950,1.14e-15,20;UBERON:0000922,4.76e-15,592;UBERON:0005423,1.31e-14,581;UBERON:0002050,1.14e-13,564;UBERON:0011216,1.66e-13,223;UBERON:0004872,1.68e-13,83;UBERON:0000923,3.45e-13,560;UBERON:0010316,3.45e-13,560;UBERON:0005291,3.45e-13,560;UBERON:0006598,3.45e-13,560;UBERON:0010317,3.45e-13,560;UBERON:0002532,3.45e-13,560;UBERON:0000055,7.47e-12,68;UBERON:0007500,9.09e-12,59;UBERON:0001981,9.09e-12,59;UBERON:0004537,9.09e-12,59;UBERON:0006965,9.09e-12,59;UBERON:0002049,1.64e-10,78;UBERON:0007798,1.64e-10,78;UBERON:0001637,6.76e-10,42;UBERON:0003509,6.76e-10,42;UBERON:0004572,6.76e-10,42;UBERON:0003076,7.38e-09,15;UBERON:0003057,7.38e-09,15;UBERON:0004638,1.04e-08,18;UBERON:0001986,1.04e-08,18;UBERON:0004852,1.04e-08,18;UBERON:0004573,1.18e-08,33;UBERON:0004571,1.18e-08,33;UBERON:0003914,4.28e-08,117;UBERON:0004535,5.51e-08,109;UBERON:0004732,2.08e-07,13;UBERON:0002420,3.41e-07,9;UBERON:0007245,3.41e-07,9;UBERON:0010009,3.41e-07,9;UBERON:0010011,3.41e-07,9;UBERON:0000454,3.41e-07,9;UBERON:0001009,3.61e-07,112;UBERON:0004733,3.76e-07,12;UBERON:0002028,3.76e-07,12;UBERON:0007277,3.76e-07,12;UBERON:0000125,5.75e-07,9;UBERON:0002308,5.75e-07,9 | |||
|phase1_expression=24.8899379600663,24.4074597235721,43.6958652697511,28.0205235388765,13.8557939272459,6.97870819280295,35.4619829435635,39.7983520258904,48.8417124733698,1.47440361900905,0.697801167972428,1.09220686065086,1.31883489114227,1.11389717664042,0.331397375727916,10.0848771967766,11.4511960324556,8.76372108464848,13.6621183661342,10.9577741688341,2.85600967741954,9.09018692286455,110.487091032588,139.338164724196,119.767678173442,0,0.328402357799783,0,0,0,0.464448369948228,0.919421224478927,0.90361775633475,0.739508020333575,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.502497330513487,1.0429658368404,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,1.14950487990897,0.661044872784862,0,1.1384259382189,1.76171156811282,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0,0,0,0,0,0,0,0,7.71090128442714,7.75868401460168,4.18142095219907,0,0.383220493601921,0,0,1.59282707162048,5.20866763085135,3.8018081777935,4.36667845325541,5.63141089079441,1.24930726552346,2.36777252044017,0,3.83052812126992,0,8.68946423296794,29.2568239576754,6.70700859703636,6.90457833955064,0,1.00267582127178,0.289693037921647,0,0,28.6440496007126,7.31707011626461,6.4119393555982,19.3194136359126,7.65020105414339,1.48313777113772,0.324547393654683,2.08955684759121,1.72845348674525,0,0,0,35.7772333260069,21.5058648776531,18.7455870868101,24.8735494446564,40.6914453123609,57.224552723534,36.5741191439419,10.8535038851118,11.028754143288,12.0499420595281,18.9329779041299,15.9657142200888,13.9115372802457,34.5603295525117,26.7346842800981,16.6097494608388,28.5152303235236,35.9230622741798,21.4643292452237,30.3765011061801,21.8010075277185,1.31780417436063,0,0.436094052142534,0,3.92554586160197,2.64818361626438,18.0707071071753,2.83734705758686,2.24271040056923,6.4049397437823,1.97334038733728,17.1166069469871,41.6255976695336,35.4712329756205,0.605429710579726,0,0.937285727335186,3.1216007683032,5.70471821544449,4.78235777765763,5.98915943083201,6.96053660782966,6.46073710830343,3.47062091133319,2.21101771161182,15.1888898328375,1.18800285728205,0.247266929278557,0,0,2.52504170931099,5.38009635449446,3.60183350129438,0,0,1.35214253015937,13.7252941623625,0,0.427114777637135,0.847727604638247,0,0.309157587715317,1.03056216018252,0.558350568994769,0,0.194874010322397,0.504867548488229,0.552299391853796,0.323292113637624,0,0,0,5.7978255948989,3.27295344709002,10.0381608386151,1.58565817968474,3.18071443971565,3.02104251460748,4.04278114559945,1.51392510525377,1.09493207722749,3.12899064659632,1.28648187638577,0,43.1862173069741,25.9876613401051,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,4.42893272774789,2.80483547606892,0.4115740113314,1.47008711385542,0,0,2.95394953340702,0,38.4953812639945,2.74508496477641,1.75600456653801,2.24803506515239,0.904760751704678,26.3877068701809,0.325808305310325,0,12.9898207822746,95.5266536994633,1.29149563659404,32.9155500895248,12.5006088395685,17.3131278533484,36.3494023061267,43.7827942668385,0,1.8720341211139,1.63494278517601,0.93733833986777,6.55130299975552,8.3647307373008,10.3887886335304,12.2066254175864,14.1851591291128,20.6918559916296,1.23267807618516,27.9892955980042,46.5507449536785,27.5208504869508,1.90493682876507,5.34783795781589,1.17217447210047,11.9750712215894,13.4704015441354,0.300343057843917,8.86061941154792,0,0,0.2933531432838,0.387815147273333,7.15312891703765,4.22651376278,0,0,0.257207374262142,0,0.266422179016099,0.714889968290738,0,0,4.56030658011229,0.355391948742546,0,1.50719688529793,1.74306691720059,0.099972991182057,0,0,0,0.239624855491583,0,0,12.1616297600767,2.87666851570537,15.2201818753911,0,1.18218456121156,0,0,130.858731474569,147.058034859113,43.3041735155509,44.7268428442711,35.086631340924,0,0,0,0.981531933753119,1.00034104211935,0.542530047399471,1.24782516918484,0.892144943985809,1.10391690523754,0.819989904948992,1.20378439891088,2.27407504055985,6.2083842775503,0,0.553107505625109,0.260650843404249,0.195801157462741,0.686286847621712,1.86091223510599,0.215714200818617,0.74709290462411,0.303127571446259,16.6435439510497,2.72151263996712,2.48107807818777,5.06424511850606,1.68396056659844,4.61300937320523,6.65219423786715,3.86049410744658,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,1.03850885836724,0,29.9731434987223,3.00759705454927,1.47329582297434,0,0,0,6.76799419361118,7.08541101360616,0,0,6.86085587803692,3.4120015221269,11.5663719588031,4.10240240594065,3.08454505380579,0,0,6.37190682612596,4.15538004464362,0.223874754722178,0.219259876645935,0,0,0,0.325378394664303,9.06760902499956,0,0,4.59412430396938,0,0,2.51343867559517,5.69979883324184,8.74970945938938,3.03240459465967,6.23037420235987,7.83090147136834,2.98293195956353,0.801288320820636,0.330569830721956,0.192190067365106,5.74257206225629,0.7081044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| |||
|short_description=p1@NRCAM | |||
}} |
Revision as of 18:47, 22 January 2014
Short description: | p1@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRCAM_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000379022, ENST00000379028, ENST00000379032, ENST00000413765, ENST00000445979, ENST00000537765, NM_001193582, NM_001193583, NM_001193584, NM_005010, uc003vfb.2, uc003vfc.2, uc003vfd.2, uc003vfe.2, uc011kmk.1_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | F8W775Q92823F8W774C9JYY6E9PF33F5GYD3B7Z670E9PDA4Q14BM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.57e-10 | 24 |
blood vessel endothelial cell | 1.04e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.04e-08 | 18 |