FFCP PHASE1:Mm9::chr11:78311195..78311232,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=237868|HGNC=|MCL_coexpression_id=392|UniProt=|association_with_transcript=-7bp_to_ENSMUST00000130955_5end|description=CAGE_peak_2_at_Sarm1_5end|id=chr11:78311195..78311232,-|ontology_enrichment_celltype=CL:0000540!1.42e-18!33;CL:0000047!1.42e-18!33;CL:0000031!1.42e-18!33;CL:0000404!1.42e-18!33;CL:0002319!3.89e-18!43;CL:0000221!4.40e-18!44;CL:0000133!4.40e-18!44;CL:0000117!3.81e-16!23;CL:0000337!3.81e-16!23;CL:0000393!6.31e-16!39;CL:0000211!6.31e-16!39;CL:0000055!2.82e-15!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.56e-24,33;CL:0000047,3.56e-24,33;CL:0000031,3.56e-24,33;CL:0000404,3.56e-24,33;CL:0000117,2.85e-23,23;CL:0000337,2.85e-23,23;CL:0002319,7.44e-22,43;CL:0000221,4.73e-21,44;CL:0000133,4.73e-21,44;CL:0000393,1.35e-18,39;CL:0000211,1.35e-18,39;CL:0002321,1.14e-08,70;CL:0002609,9.58e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.13e-34!73;UBERON:0005743!1.13e-34!73;UBERON:0000073!8.19e-34!75;UBERON:0001016!8.19e-34!75;UBERON:0004121!1.25e-31!102;UBERON:0000924!1.25e-31!102;UBERON:0006601!1.25e-31!102;UBERON:0002346!1.27e-31!71;UBERON:0003075!1.27e-31!71;UBERON:0007284!1.27e-31!71;UBERON:0001049!2.45e-26!52;UBERON:0005068!2.45e-26!52;UBERON:0006241!2.45e-26!52;UBERON:0007135!2.45e-26!52;UBERON:0000033!6.82e-26!63;UBERON:0000955!1.96e-24!50;UBERON:0006238!1.96e-24!50;UBERON:0002616!7.26e-24!49;UBERON:0003056!6.96e-23!49;UBERON:0002020!1.54e-20!34;UBERON:0003080!1.01e-19!40;UBERON:0002780!2.15e-19!39;UBERON:0001890!2.15e-19!39;UBERON:0006240!2.15e-19!39;UBERON:0002791!5.86e-17!29;UBERON:0003528!5.86e-17!29;UBERON:0001893!5.86e-17!29;UBERON:0007811!2.69e-15!86;UBERON:0000153!2.17e-13!94;UBERON:0000956!1.39e-12!21;UBERON:0001869!1.39e-12!21;UBERON:0000203!1.39e-12!21;UBERON:0002619!6.68e-10!17;UBERON:0003076!3.95e-07!12;UBERON:0003057!3.95e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.04e-44,73;UBERON:0001016,1.33e-42,75;UBERON:0002346,1.23e-41,64;UBERON:0003075,1.23e-41,64;UBERON:0007284,1.23e-41,64;UBERON:0004121,5.29e-39,95;UBERON:0000924,5.29e-39,95;UBERON:0006601,5.29e-39,95;UBERON:0000073,4.33e-37,54;UBERON:0001049,3.71e-35,52;UBERON:0005068,3.71e-35,52;UBERON:0006241,3.71e-35,52;UBERON:0007135,3.71e-35,52;UBERON:0010371,7.82e-34,73;UBERON:0003056,3.17e-30,49;UBERON:0002020,7.83e-30,34;UBERON:0000955,9.67e-30,47;UBERON:0006238,9.67e-30,47;UBERON:0002616,6.37e-29,46;UBERON:0003080,1.80e-26,40;UBERON:0002780,5.61e-26,39;UBERON:0001890,5.61e-26,39;UBERON:0006240,5.61e-26,39;UBERON:0003528,1.74e-24,29;UBERON:0002791,1.74e-24,29;UBERON:0001893,1.74e-24,29;UBERON:0010314,2.93e-24,92;UBERON:0000956,5.81e-18,21;UBERON:0001869,5.81e-18,21;UBERON:0000203,5.81e-18,21;UBERON:0002619,5.70e-14,17;UBERON:0002021,6.08e-09,10;UBERON:0000411,6.08e-09,10;UBERON:0001950,6.08e-09,10;UBERON:0003076,8.10e-09,12;UBERON:0003057,8.10e-09,12;UBERON:0002420,1.31e-07,8;UBERON:0007245,1.31e-07,8;UBERON:0010009,1.31e-07,8;UBERON:0010011,1.31e-07,8;UBERON:0000454,1.31e-07,8;UBERON:0000025,3.61e-07,114;UBERON:0002240,4.19e-07,6;UBERON:0005174,4.19e-07,6;UBERON:0001137,4.19e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.903863264091034,1.12630977721333,1.40438715793196,0.34243593645101,0.239316476986009,0.856003649656029,0.34968160967599,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0.42438965179803,0.850432901510698,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.912392380975631,0.734187008646726,0.782391344348039,2.8343270329458,1.09843091367236,1.1665793944457,0.839918529752175,0,0.503347818173209,0.725362142011344,0.336093799142464,0.257259436035947,0,0,12.1389876515759,16.9277113367051,22.8179305262225,1.0165335962074,0,0.449949858640699,0,0.7104801149461,1.19840044207362,3.84218305321555,13.894408049336,20.2508907497536,13.6711224878398,9.71213346972932,10.8225585066291,16.9037302916637,12.172374819316,49.6378144769411,3.30347642998166,4.21368215681119,5.06901559745603,12.0016521834476,9.60620257825301,13.5437476344758,1.95428099300967,5.6276261003168,3.97275444219706,17.9723437138937,12.5287079103211,16.7759501242771,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.563373679106722,0,0,0,0.432982082022428,0,0,0,0,0.742210695324124,0.520455980298408,1.21786191324856,0.922461989024234,1.05505848386836,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0,0,0,3.80615036115011,5.86450779077674,0.255457055208591,0,0,0,1.64769703345305,1.37250180845588,10.0523481690292,4.86708096538374,3.06858548796397,1.66230435647648,1.78465389374533,0,0.124406970610093,0,2.94618598241064,0.130120442962704,0.459804208866946,3.24111833649629,2.56198190320716,2.72145996605311,4.22775276940004,5.24729657534481,9.05461797586555,0.431135985865684,0.378212160335639,0.527853372491847,0,0,0,0.823128545631774,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,3.36463917702604,6.48299057989492,0,0.264450566663544,0.213288250535234,1.39342003116263,0.515469845288373,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,0.251335208800269,0,0.779856348476481,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,1.08781136763742,0,0,1.12385412991454,2.34423373184406,0.655739781506702,0.252470927204373,2.2085575359138,2.34263246577983,4.09304455692318,0.955875191810208,0.891194696329576,2.26461224631066,2.83367491172426,5.55286130031493,1.97643888973262,3.53453448063988,0.425820255624806,0,0.325773918707152,0.989820737835213,2.65490276679926,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0.680879211507576,1.8006109403131,1.55230420539305,1.50035924522115,1.24138163549592,2.31879462882692,1.48094118541909,0.913394847343798,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0,3.15223013417866,0.341741761595705,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0.949007980743406,0.203319467126849,0.540026704109006,0.627264888043406,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.269141569828427,0.167884616364078,0.386379188064381,0,0.183151624267265,0,1.00314420807073,3.95326289831947,4.60325236507177,2.86447756719698,9.79563139359019,4.11049511862385,3.0215755895588,4.72515750162264,2.70192721934532,3.62513927187364,4.65984280576638,1.14166082342594,1.19707462020309,1.70733605754134,2.43106717068294,1.46729213839588,2.20612210140017,0.666740183404846,1.23621034343337,0.962757628775446,1.76888048234658,1.52087579934144,1.13175804831646,0.468207537349412,1.15245274328765,1.32101578597911,1.42888107384922,0.579421629724277,0.578727661391115,1.64834360321323,0.735994600671987,1.37147700954166,1.06485483695602,2.14592570952589,0.872078499793971,1.12931256498397,0.846146078916765,0.73171189149109,1.57841826862706,0.950628796921032,3.36685362994643,1.54225523561426,1.57607171800902,2.04615521584845,0.929621047115796,1.15743966588685,1.99848462350357,2.10538447600868,1.07435527024149,0.765153328275374,0.661774257358546,0|short_description=p2@Sarm1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:237868 | |||
|HGNC= | |||
|MCL_coexpression_id=392 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENSMUST00000130955_5end | |||
|cluster_id=chr11:78311195..78311232,- | |||
|description=CAGE_peak_2_at_Sarm1_5end | |||
|id=chr11:78311195..78311232,- | |||
|ontology_enrichment_celltype=CL:0000540!1.42e-18!33;CL:0000047!1.42e-18!33;CL:0000031!1.42e-18!33;CL:0000404!1.42e-18!33;CL:0002319!3.89e-18!43;CL:0000221!4.40e-18!44;CL:0000133!4.40e-18!44;CL:0000117!3.81e-16!23;CL:0000337!3.81e-16!23;CL:0000393!6.31e-16!39;CL:0000211!6.31e-16!39;CL:0000055!2.82e-15!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.56e-24,33;CL:0000047,3.56e-24,33;CL:0000031,3.56e-24,33;CL:0000404,3.56e-24,33;CL:0000117,2.85e-23,23;CL:0000337,2.85e-23,23;CL:0002319,7.44e-22,43;CL:0000221,4.73e-21,44;CL:0000133,4.73e-21,44;CL:0000393,1.35e-18,39;CL:0000211,1.35e-18,39;CL:0002321,1.14e-08,70;CL:0002609,9.58e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-34!73;UBERON:0005743!1.13e-34!73;UBERON:0000073!8.19e-34!75;UBERON:0001016!8.19e-34!75;UBERON:0004121!1.25e-31!102;UBERON:0000924!1.25e-31!102;UBERON:0006601!1.25e-31!102;UBERON:0002346!1.27e-31!71;UBERON:0003075!1.27e-31!71;UBERON:0007284!1.27e-31!71;UBERON:0001049!2.45e-26!52;UBERON:0005068!2.45e-26!52;UBERON:0006241!2.45e-26!52;UBERON:0007135!2.45e-26!52;UBERON:0000033!6.82e-26!63;UBERON:0000955!1.96e-24!50;UBERON:0006238!1.96e-24!50;UBERON:0002616!7.26e-24!49;UBERON:0003056!6.96e-23!49;UBERON:0002020!1.54e-20!34;UBERON:0003080!1.01e-19!40;UBERON:0002780!2.15e-19!39;UBERON:0001890!2.15e-19!39;UBERON:0006240!2.15e-19!39;UBERON:0002791!5.86e-17!29;UBERON:0003528!5.86e-17!29;UBERON:0001893!5.86e-17!29;UBERON:0007811!2.69e-15!86;UBERON:0000153!2.17e-13!94;UBERON:0000956!1.39e-12!21;UBERON:0001869!1.39e-12!21;UBERON:0000203!1.39e-12!21;UBERON:0002619!6.68e-10!17;UBERON:0003076!3.95e-07!12;UBERON:0003057!3.95e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.04e-44,73;UBERON:0001016,1.33e-42,75;UBERON:0002346,1.23e-41,64;UBERON:0003075,1.23e-41,64;UBERON:0007284,1.23e-41,64;UBERON:0004121,5.29e-39,95;UBERON:0000924,5.29e-39,95;UBERON:0006601,5.29e-39,95;UBERON:0000073,4.33e-37,54;UBERON:0001049,3.71e-35,52;UBERON:0005068,3.71e-35,52;UBERON:0006241,3.71e-35,52;UBERON:0007135,3.71e-35,52;UBERON:0010371,7.82e-34,73;UBERON:0003056,3.17e-30,49;UBERON:0002020,7.83e-30,34;UBERON:0000955,9.67e-30,47;UBERON:0006238,9.67e-30,47;UBERON:0002616,6.37e-29,46;UBERON:0003080,1.80e-26,40;UBERON:0002780,5.61e-26,39;UBERON:0001890,5.61e-26,39;UBERON:0006240,5.61e-26,39;UBERON:0003528,1.74e-24,29;UBERON:0002791,1.74e-24,29;UBERON:0001893,1.74e-24,29;UBERON:0010314,2.93e-24,92;UBERON:0000956,5.81e-18,21;UBERON:0001869,5.81e-18,21;UBERON:0000203,5.81e-18,21;UBERON:0002619,5.70e-14,17;UBERON:0002021,6.08e-09,10;UBERON:0000411,6.08e-09,10;UBERON:0001950,6.08e-09,10;UBERON:0003076,8.10e-09,12;UBERON:0003057,8.10e-09,12;UBERON:0002420,1.31e-07,8;UBERON:0007245,1.31e-07,8;UBERON:0010009,1.31e-07,8;UBERON:0010011,1.31e-07,8;UBERON:0000454,1.31e-07,8;UBERON:0000025,3.61e-07,114;UBERON:0002240,4.19e-07,6;UBERON:0005174,4.19e-07,6;UBERON:0001137,4.19e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.903863264091034,1.12630977721333,1.40438715793196,0.34243593645101,0.239316476986009,0.856003649656029,0.34968160967599,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0.42438965179803,0.850432901510698,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.912392380975631,0.734187008646726,0.782391344348039,2.8343270329458,1.09843091367236,1.1665793944457,0.839918529752175,0,0.503347818173209,0.725362142011344,0.336093799142464,0.257259436035947,0,0,12.1389876515759,16.9277113367051,22.8179305262225,1.0165335962074,0,0.449949858640699,0,0.7104801149461,1.19840044207362,3.84218305321555,13.894408049336,20.2508907497536,13.6711224878398,9.71213346972932,10.8225585066291,16.9037302916637,12.172374819316,49.6378144769411,3.30347642998166,4.21368215681119,5.06901559745603,12.0016521834476,9.60620257825301,13.5437476344758,1.95428099300967,5.6276261003168,3.97275444219706,17.9723437138937,12.5287079103211,16.7759501242771,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.563373679106722,0,0,0,0.432982082022428,0,0,0,0,0.742210695324124,0.520455980298408,1.21786191324856,0.922461989024234,1.05505848386836,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0,0,0,3.80615036115011,5.86450779077674,0.255457055208591,0,0,0,1.64769703345305,1.37250180845588,10.0523481690292,4.86708096538374,3.06858548796397,1.66230435647648,1.78465389374533,0,0.124406970610093,0,2.94618598241064,0.130120442962704,0.459804208866946,3.24111833649629,2.56198190320716,2.72145996605311,4.22775276940004,5.24729657534481,9.05461797586555,0.431135985865684,0.378212160335639,0.527853372491847,0,0,0,0.823128545631774,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,3.36463917702604,6.48299057989492,0,0.264450566663544,0.213288250535234,1.39342003116263,0.515469845288373,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,0.251335208800269,0,0.779856348476481,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,1.08781136763742,0,0,1.12385412991454,2.34423373184406,0.655739781506702,0.252470927204373,2.2085575359138,2.34263246577983,4.09304455692318,0.955875191810208,0.891194696329576,2.26461224631066,2.83367491172426,5.55286130031493,1.97643888973262,3.53453448063988,0.425820255624806,0,0.325773918707152,0.989820737835213,2.65490276679926,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0,0,1.03135543248187,0.680879211507576,1.8006109403131,1.55230420539305,1.50035924522115,1.24138163549592,2.31879462882692,1.48094118541909,0.913394847343798,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0,3.15223013417866,0.341741761595705,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0.949007980743406,0.203319467126849,0.540026704109006,0.627264888043406,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.269141569828427,0.167884616364078,0.386379188064381,0,0.183151624267265,0,1.00314420807073,3.95326289831947,4.60325236507177,2.86447756719698,9.79563139359019,4.11049511862385,3.0215755895588,4.72515750162264,2.70192721934532,3.62513927187364,4.65984280576638,1.14166082342594,1.19707462020309,1.70733605754134,2.43106717068294,1.46729213839588,2.20612210140017,0.666740183404846,1.23621034343337,0.962757628775446,1.76888048234658,1.52087579934144,1.13175804831646,0.468207537349412,1.15245274328765,1.32101578597911,1.42888107384922,0.579421629724277,0.578727661391115,1.64834360321323,0.735994600671987,1.37147700954166,1.06485483695602,2.14592570952589,0.872078499793971,1.12931256498397,0.846146078916765,0.73171189149109,1.57841826862706,0.950628796921032,3.36685362994643,1.54225523561426,1.57607171800902,2.04615521584845,0.929621047115796,1.15743966588685,1.99848462350357,2.10538447600868,1.07435527024149,0.765153328275374,0.661774257358546,0 | |||
|short_description=p2@Sarm1 | |||
}} |
Revision as of 01:52, 4 August 2015
Short description: | p2@Sarm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sarm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | -7bp_to_ENSMUST00000130955_5end |
EntrezGene: | 237868 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.56e-24 | 33 |
neuronal stem cell | 3.56e-24 | 33 |
neuroblast | 3.56e-24 | 33 |
electrically signaling cell | 3.56e-24 | 33 |
CNS neuron (sensu Vertebrata) | 2.85e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.85e-23 | 23 |
neural cell | 7.44e-22 | 43 |
ectodermal cell | 4.73e-21 | 44 |
neurectodermal cell | 4.73e-21 | 44 |
electrically responsive cell | 1.35e-18 | 39 |
electrically active cell | 1.35e-18 | 39 |
embryonic cell | 1.14e-08 | 70 |
neuron of cerebral cortex | 9.58e-08 | 6 |