FFCP PHASE1:Mm9::chr2:132607185..132607196,+: Difference between revisions
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{{FFCP|EntrezGene=12653|HGNC=|MCL_coexpression_id=278|UniProt=P16014,E9Q957,Q3TY66|association_with_transcript=171bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end|description=CAGE_peak_5_at_Chgb_5end|id=chr2:132607185..132607196,+|ontology_enrichment_celltype=CL:0000117!5.04e-14!23;CL:0000337!5.04e-14!23;CL:0000540!1.36e-12!33;CL:0000047!1.36e-12!33;CL:0000031!1.36e-12!33;CL:0000404!1.36e-12!33;CL:0000393!4.82e-09!39;CL:0000211!4.82e-09!39;CL:0000221!5.28e-08!44;CL:0000133!5.28e-08!44;CL:0002319!8.66e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,9.05e-15,23;CL:0000337,9.05e-15,23;CL:0000540,8.44e-09,33;CL:0000047,8.44e-09,33;CL:0000031,8.44e-09,33;CL:0000404,8.44e-09,33;CL:0000393,9.55e-07,39;CL:0000211,9.55e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.18e-34!71;UBERON:0003075!5.18e-34!71;UBERON:0007284!5.18e-34!71;UBERON:0004121!3.20e-30!102;UBERON:0000924!3.20e-30!102;UBERON:0006601!3.20e-30!102;UBERON:0001017!2.51e-29!73;UBERON:0005743!2.51e-29!73;UBERON:0000073!1.19e-28!75;UBERON:0001016!1.19e-28!75;UBERON:0001049!1.80e-28!52;UBERON:0005068!1.80e-28!52;UBERON:0006241!1.80e-28!52;UBERON:0007135!1.80e-28!52;UBERON:0000033!1.38e-27!63;UBERON:0000955!5.35e-27!50;UBERON:0006238!5.35e-27!50;UBERON:0002616!2.19e-26!49;UBERON:0003056!9.62e-24!49;UBERON:0003080!1.95e-22!40;UBERON:0002780!1.39e-21!39;UBERON:0001890!1.39e-21!39;UBERON:0006240!1.39e-21!39;UBERON:0002020!1.37e-19!34;UBERON:0002791!2.94e-16!29;UBERON:0003528!2.94e-16!29;UBERON:0001893!2.94e-16!29;UBERON:0007811!2.57e-14!86;UBERON:0000153!2.09e-11!94;UBERON:0000956!4.53e-11!21;UBERON:0001869!4.53e-11!21;UBERON:0000203!4.53e-11!21;UBERON:0002021!7.03e-10!10;UBERON:0000411!7.03e-10!10;UBERON:0001950!7.03e-10!10;UBERON:0002619!1.04e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.88e-38,54;UBERON:0001049,5.19e-36,52;UBERON:0005068,5.19e-36,52;UBERON:0006241,5.19e-36,52;UBERON:0007135,5.19e-36,52;UBERON:0002346,7.49e-35,64;UBERON:0003075,7.49e-35,64;UBERON:0007284,7.49e-35,64;UBERON:0001017,3.69e-33,73;UBERON:0001016,6.59e-32,75;UBERON:0010314,3.56e-30,92;UBERON:0000955,4.99e-30,47;UBERON:0006238,4.99e-30,47;UBERON:0002616,4.40e-29,46;UBERON:0010371,6.42e-29,73;UBERON:0004121,1.89e-28,95;UBERON:0000924,1.89e-28,95;UBERON:0006601,1.89e-28,95;UBERON:0003056,1.26e-26,49;UBERON:0003080,1.60e-25,40;UBERON:0002020,1.62e-24,34;UBERON:0002780,3.08e-24,39;UBERON:0001890,3.08e-24,39;UBERON:0006240,3.08e-24,39;UBERON:0003528,2.89e-19,29;UBERON:0002791,2.89e-19,29;UBERON:0001893,2.89e-19,29;UBERON:0002021,2.43e-15,10;UBERON:0000411,2.43e-15,10;UBERON:0001950,2.43e-15,10;UBERON:0002619,1.13e-12,17;UBERON:0000956,2.71e-11,21;UBERON:0001869,2.71e-11,21;UBERON:0000203,2.71e-11,21;UBERON:0003076,1.29e-10,12;UBERON:0003057,1.29e-10,12;UBERON:0000025,4.80e-10,114;UBERON:0002420,8.83e-10,8;UBERON:0007245,8.83e-10,8;UBERON:0010009,8.83e-10,8;UBERON:0010011,8.83e-10,8;UBERON:0000454,8.83e-10,8;UBERON:0002369,2.90e-09,7;UBERON:0006858,2.90e-09,7;UBERON:0004111,1.11e-08,122;UBERON:0002240,6.63e-08,6;UBERON:0005174,6.63e-08,6;UBERON:0001137,6.63e-08,6|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0.319984845586813,0,0,0,0,0.760093677825496,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,5.81890077199236,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0.841299845405528,5.42736870367227,5.30084498283872,1.46988959057945,0.670918297127655,0.919218786610021,4.40463523997555,9.57655035638908,11.6740965274745,5.27545150920775,4.84884511092771,5.73004707612436,9.21303896704557,7.87867654044352,7.79271063661732,5.00868595305235,8.11518580554887,4.47358669980721,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,14.8442139064825,2.94925055502431,7.00270600117925,4.15107895060905,6.63179618431539,8.23120949949934,9.42499434972566,0,0,0,0,0,0,1.86391761218122,11.4184510834503,16.3368431314495,0,0,0,0,11.3840885947665,6.40500843946077,1.50785222535437,10.081810571152,12.5300574091862,9.97382613885888,10.2211995732687,0,0,0,1.26265113531884,0,0,0.180062129805349,0.753524089178575,1.76894897793452,1.2811372028485,2.34254311399322,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,1.44066457330998,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15138362930414,12.5416504653657,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,2.57057053137446,0,0,0,0,0,0.242780636154981,0.302323556964751,0.754420319023592,0.885905678642318,1.22974059177571,0.516856586336442,1.09060118843252,0.356497378384721,0,0,0,41.5336319019621,0.18006109403131,0.388076051348264,0.643011105094777,2.30542303734956,4.10248280484762,3.78462747384878,4.87143918583359,0,0,0.441056796109924,0,0,0,0,0,0.291480836629851,10.7546675166096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,16.1113832777512,13.7494923225455,15.8104927756193,14.3867329151835,9.82012066606611,10.8003600037089,13.5096360967266,14.9536994964788,8.28416498802912,0,0,1.19513524027894,0.486213434136588,0.209613162627982,0.551530525350042,0.888986911206461,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.561849044819294,0.704276676453562,0.689225627467359,0.952587382566147,0.579421629724277,0,0.824171801606613,1.17759136107518,0,0.887379030796687,1.1921809497366,0.290692833264657,0.188218760830661,0.507687647350059,0.914639864363863,0.789209134313529,1.08643291076689,0.561142271657738,0.474540072496697,0.394017929502254,0.818462086339379,0.77468420592983,0,1.24905288968973,0.701794825336225,0.429742108096597,0.382576664137687,0,0|short_description=p5@Chgb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12653 | |||
|HGNC= | |||
|MCL_coexpression_id=278 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P16014,uniprot:E9Q957,uniprot:Q3TY66 | |||
|association_with_transcript=171bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end | |||
|cluster_id=chr2:132607185..132607196,+ | |||
|description=CAGE_peak_5_at_Chgb_5end | |||
|id=chr2:132607185..132607196,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.04e-14!23;CL:0000337!5.04e-14!23;CL:0000540!1.36e-12!33;CL:0000047!1.36e-12!33;CL:0000031!1.36e-12!33;CL:0000404!1.36e-12!33;CL:0000393!4.82e-09!39;CL:0000211!4.82e-09!39;CL:0000221!5.28e-08!44;CL:0000133!5.28e-08!44;CL:0002319!8.66e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.05e-15,23;CL:0000337,9.05e-15,23;CL:0000540,8.44e-09,33;CL:0000047,8.44e-09,33;CL:0000031,8.44e-09,33;CL:0000404,8.44e-09,33;CL:0000393,9.55e-07,39;CL:0000211,9.55e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.18e-34!71;UBERON:0003075!5.18e-34!71;UBERON:0007284!5.18e-34!71;UBERON:0004121!3.20e-30!102;UBERON:0000924!3.20e-30!102;UBERON:0006601!3.20e-30!102;UBERON:0001017!2.51e-29!73;UBERON:0005743!2.51e-29!73;UBERON:0000073!1.19e-28!75;UBERON:0001016!1.19e-28!75;UBERON:0001049!1.80e-28!52;UBERON:0005068!1.80e-28!52;UBERON:0006241!1.80e-28!52;UBERON:0007135!1.80e-28!52;UBERON:0000033!1.38e-27!63;UBERON:0000955!5.35e-27!50;UBERON:0006238!5.35e-27!50;UBERON:0002616!2.19e-26!49;UBERON:0003056!9.62e-24!49;UBERON:0003080!1.95e-22!40;UBERON:0002780!1.39e-21!39;UBERON:0001890!1.39e-21!39;UBERON:0006240!1.39e-21!39;UBERON:0002020!1.37e-19!34;UBERON:0002791!2.94e-16!29;UBERON:0003528!2.94e-16!29;UBERON:0001893!2.94e-16!29;UBERON:0007811!2.57e-14!86;UBERON:0000153!2.09e-11!94;UBERON:0000956!4.53e-11!21;UBERON:0001869!4.53e-11!21;UBERON:0000203!4.53e-11!21;UBERON:0002021!7.03e-10!10;UBERON:0000411!7.03e-10!10;UBERON:0001950!7.03e-10!10;UBERON:0002619!1.04e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.88e-38,54;UBERON:0001049,5.19e-36,52;UBERON:0005068,5.19e-36,52;UBERON:0006241,5.19e-36,52;UBERON:0007135,5.19e-36,52;UBERON:0002346,7.49e-35,64;UBERON:0003075,7.49e-35,64;UBERON:0007284,7.49e-35,64;UBERON:0001017,3.69e-33,73;UBERON:0001016,6.59e-32,75;UBERON:0010314,3.56e-30,92;UBERON:0000955,4.99e-30,47;UBERON:0006238,4.99e-30,47;UBERON:0002616,4.40e-29,46;UBERON:0010371,6.42e-29,73;UBERON:0004121,1.89e-28,95;UBERON:0000924,1.89e-28,95;UBERON:0006601,1.89e-28,95;UBERON:0003056,1.26e-26,49;UBERON:0003080,1.60e-25,40;UBERON:0002020,1.62e-24,34;UBERON:0002780,3.08e-24,39;UBERON:0001890,3.08e-24,39;UBERON:0006240,3.08e-24,39;UBERON:0003528,2.89e-19,29;UBERON:0002791,2.89e-19,29;UBERON:0001893,2.89e-19,29;UBERON:0002021,2.43e-15,10;UBERON:0000411,2.43e-15,10;UBERON:0001950,2.43e-15,10;UBERON:0002619,1.13e-12,17;UBERON:0000956,2.71e-11,21;UBERON:0001869,2.71e-11,21;UBERON:0000203,2.71e-11,21;UBERON:0003076,1.29e-10,12;UBERON:0003057,1.29e-10,12;UBERON:0000025,4.80e-10,114;UBERON:0002420,8.83e-10,8;UBERON:0007245,8.83e-10,8;UBERON:0010009,8.83e-10,8;UBERON:0010011,8.83e-10,8;UBERON:0000454,8.83e-10,8;UBERON:0002369,2.90e-09,7;UBERON:0006858,2.90e-09,7;UBERON:0004111,1.11e-08,122;UBERON:0002240,6.63e-08,6;UBERON:0005174,6.63e-08,6;UBERON:0001137,6.63e-08,6 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0.319984845586813,0,0,0,0,0.760093677825496,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,5.81890077199236,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.270011876663381,0.841299845405528,5.42736870367227,5.30084498283872,1.46988959057945,0.670918297127655,0.919218786610021,4.40463523997555,9.57655035638908,11.6740965274745,5.27545150920775,4.84884511092771,5.73004707612436,9.21303896704557,7.87867654044352,7.79271063661732,5.00868595305235,8.11518580554887,4.47358669980721,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,14.8442139064825,2.94925055502431,7.00270600117925,4.15107895060905,6.63179618431539,8.23120949949934,9.42499434972566,0,0,0,0,0,0,1.86391761218122,11.4184510834503,16.3368431314495,0,0,0,0,11.3840885947665,6.40500843946077,1.50785222535437,10.081810571152,12.5300574091862,9.97382613885888,10.2211995732687,0,0,0,1.26265113531884,0,0,0.180062129805349,0.753524089178575,1.76894897793452,1.2811372028485,2.34254311399322,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,1.44066457330998,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15138362930414,12.5416504653657,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,2.57057053137446,0,0,0,0,0,0.242780636154981,0.302323556964751,0.754420319023592,0.885905678642318,1.22974059177571,0.516856586336442,1.09060118843252,0.356497378384721,0,0,0,41.5336319019621,0.18006109403131,0.388076051348264,0.643011105094777,2.30542303734956,4.10248280484762,3.78462747384878,4.87143918583359,0,0,0.441056796109924,0,0,0,0,0,0.291480836629851,10.7546675166096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,16.1113832777512,13.7494923225455,15.8104927756193,14.3867329151835,9.82012066606611,10.8003600037089,13.5096360967266,14.9536994964788,8.28416498802912,0,0,1.19513524027894,0.486213434136588,0.209613162627982,0.551530525350042,0.888986911206461,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.561849044819294,0.704276676453562,0.689225627467359,0.952587382566147,0.579421629724277,0,0.824171801606613,1.17759136107518,0,0.887379030796687,1.1921809497366,0.290692833264657,0.188218760830661,0.507687647350059,0.914639864363863,0.789209134313529,1.08643291076689,0.561142271657738,0.474540072496697,0.394017929502254,0.818462086339379,0.77468420592983,0,1.24905288968973,0.701794825336225,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p5@Chgb | |||
}} |
Revision as of 02:49, 4 August 2015
Short description: | p5@Chgb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Chgb_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | 171bp_to_ENSMUST00000028826, ENSMUST00000168530, NM_007694, uc008mnf.1_5end |
EntrezGene: | 12653 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.05e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.05e-15 | 23 |
neuron | 8.44e-09 | 33 |
neuronal stem cell | 8.44e-09 | 33 |
neuroblast | 8.44e-09 | 33 |
electrically signaling cell | 8.44e-09 | 33 |
electrically responsive cell | 9.55e-07 | 39 |
electrically active cell | 9.55e-07 | 39 |