FFCP PHASE1:Mm9::chr5:23182252..23182307,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20817|HGNC=|MCL_coexpression_id=1|UniProt=Q6P5E1|association_with_transcript=0bp_to_ENSMUST00000171854,uc008wqf.1_5end|description=CAGE_peak_3_at_Srpk2_5end|id=chr5:23182252..23182307,-|ontology_enrichment_celltype=CL:0000117!4.23e-09!23;CL:0000337!4.23e-09!23;CL:0000393!5.26e-08!39;CL:0000211!5.26e-08!39;CL:0000540!1.46e-07!33;CL:0000047!1.46e-07!33;CL:0000031!1.46e-07!33;CL:0000404!1.46e-07!33;CL:0000055!9.71e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.16e-11,23;CL:0000337,4.16e-11,23;CL:0000540,8.76e-07,33;CL:0000047,8.76e-07,33;CL:0000031,8.76e-07,33;CL:0000404,8.76e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.22e-20!73;UBERON:0005743!1.22e-20!73;UBERON:0000073!5.59e-20!75;UBERON:0001016!5.59e-20!75;UBERON:0001049!1.47e-19!52;UBERON:0005068!1.47e-19!52;UBERON:0006241!1.47e-19!52;UBERON:0007135!1.47e-19!52;UBERON:0000033!1.23e-18!63;UBERON:0004121!1.36e-18!102;UBERON:0000924!1.36e-18!102;UBERON:0006601!1.36e-18!102;UBERON:0000955!1.55e-18!50;UBERON:0006238!1.55e-18!50;UBERON:0002616!6.08e-18!49;UBERON:0002346!2.58e-17!71;UBERON:0003075!2.58e-17!71;UBERON:0007284!2.58e-17!71;UBERON:0002020!3.28e-15!34;UBERON:0003080!8.31e-14!40;UBERON:0003056!9.58e-14!49;UBERON:0002780!4.05e-13!39;UBERON:0001890!4.05e-13!39;UBERON:0006240!4.05e-13!39;UBERON:0002791!2.39e-12!29;UBERON:0003528!2.39e-12!29;UBERON:0001893!2.39e-12!29;UBERON:0007811!1.31e-08!86;UBERON:0000956!6.86e-08!21;UBERON:0001869!6.86e-08!21;UBERON:0000203!6.86e-08!21;UBERON:0002619!7.06e-08!17;UBERON:0000153!2.27e-07!94;UBERON:0002021!4.11e-07!10;UBERON:0000411!4.11e-07!10;UBERON:0001950!4.11e-07!10;UBERON:0000468!9.30e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.44e-26,54;UBERON:0001049,4.77e-24,52;UBERON:0005068,4.77e-24,52;UBERON:0006241,4.77e-24,52;UBERON:0007135,4.77e-24,52;UBERON:0001017,4.00e-23,73;UBERON:0002346,1.09e-22,64;UBERON:0003075,1.09e-22,64;UBERON:0007284,1.09e-22,64;UBERON:0001016,5.00e-22,75;UBERON:0002020,3.57e-20,34;UBERON:0000955,1.33e-19,47;UBERON:0006238,1.33e-19,47;UBERON:0010371,6.32e-19,73;UBERON:0002616,8.89e-19,46;UBERON:0004121,2.34e-18,95;UBERON:0000924,2.34e-18,95;UBERON:0006601,2.34e-18,95;UBERON:0003528,6.65e-16,29;UBERON:0002791,6.65e-16,29;UBERON:0001893,6.65e-16,29;UBERON:0003056,6.97e-16,49;UBERON:0003080,3.22e-15,40;UBERON:0010314,1.69e-14,92;UBERON:0002780,2.86e-14,39;UBERON:0001890,2.86e-14,39;UBERON:0006240,2.86e-14,39;UBERON:0002619,5.66e-11,17;UBERON:0002021,4.78e-10,10;UBERON:0000411,4.78e-10,10;UBERON:0001950,4.78e-10,10;UBERON:0003076,6.10e-10,12;UBERON:0003057,6.10e-10,12;UBERON:0000956,2.34e-09,21;UBERON:0001869,2.34e-09,21;UBERON:0000203,2.34e-09,21;UBERON:0002420,2.38e-08,8;UBERON:0007245,2.38e-08,8;UBERON:0010009,2.38e-08,8;UBERON:0010011,2.38e-08,8;UBERON:0000454,2.38e-08,8;UBERON:0002240,9.75e-07,6;UBERON:0005174,9.75e-07,6;UBERON:0001137,9.75e-07,6|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,1.52065396829272,0.550640256485045,0,1.74420125104357,2.19686182734472,1.36100929351998,0.699932108126813,0,0,0,0,0.257259436035947,0.573066879877513,1.03134418455488,1.41621522601718,2.11596391708813,3.80298842103708,0,0,0.449949858640699,0,0,1.19840044207362,0,0.207379224616955,0.540023753326763,0.841299845405528,5.42736870367227,7.28866185140325,0.61245399607477,1.34183659425531,0,12.1127469099328,15.9609172606485,16.2822925251618,3.29715719325485,5.03182039813253,2.6045668527838,18.1468949350898,11.2552522006336,14.8214300343506,9.42811473515737,7.83044244395066,4.65998614563251,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.561777680527007,0.511290967734173,0.259786004602869,0,0.422530259330042,1.28326477414318,0,7.11066703153331,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0,0.230615497256059,0.904335843315735,1.29347577849275,0.502666365318702,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,9.07620470735796,8.16842156572475,0,0,0,0,20.8208988772704,8.6925114535539,6.03140890141749,7.99591872884472,6.64860189058859,18.90871205492,11.1946471516753,0.712875546952214,0.124406970610093,0,1.05220927943237,0,0,0.540186389416048,1.05493372485001,1.2246569847239,1.2811372028485,1.12442069471675,4.13925393182425,0,0.378212160335639,0,0.876782929710299,0,0.696504333044333,0.61734640922383,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,1.07309360559848,1.63471479314037,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,6.72927835405207,8.54108282748061,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0.379335801906163,0.342745537829186,1.1270773567308,0.814605311381257,0.387904974335251,0.841629838683823,1.26473074248515,0.442830443938806,0.941992367048249,0.493588655687202,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0.780534591431195,0.472905432318573,1.10732344824387,0.637819074629948,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.551873492609465,18.3027672586083,17.9333880486071,1.14754461763673,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,7.06906896127976,1.70328102249922,0.35613120733451,1.30309567482861,0.329940245945071,0,0,0.604647113929502,0,0,0.307435147943927,1.29214146584111,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,1.41872186913819,0.535106452806212,1.15184314421485,0.913394847343798,0,0,0.441056796109924,0.49465875882444,0.645857706783622,0.180938774784468,0.358117032009409,0.164140899745061,0,17.9862542950194,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.836353184057875,0.436725127492355,0.269728692769641,1.32245529160537,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,0.598066184175915,0.66183396182839,0.583353565032143,1.42075805825504,2.02747350588934,3.40335992072686,4.6873578543822,6.08184197669123,2.65742532908607,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0.221985953374065,0.0897138566094757,0,0.772758376128762,0.750729901804728,0.549454872801795,0.214368379079066,0,9.60078132449013,7.36520378411483,13.1765968091061,2.57779773515531,8.90607275701835,12.0863023582352,4.72515750162264,4.05289082901798,8.60970577069989,6.21312374102184,0.415149390336707,0.798049746802062,0.341467211508268,1.21553358534147,1.25767897576789,1.83843508450014,2.00022055021454,0,1.28367683836726,2.02157769411038,2.28131369901216,2.26351609663291,1.03005658216871,0.89635213366817,1.03383844120104,0.952587382566147,1.27472758539341,1.54327376370964,0.412085900803307,0.735994600671987,1.37147700954166,1.4198064492747,1.66905332963125,1.0174249164263,1.41164070622996,1.18460451048347,1.64635175585495,1.57841826862706,0.814824683075171,1.12228454331548,0.830445126869219,1.77308068276014,2.86461730218783,1.23949472948773,1.35034627686799,2.74791635731741,0.935726433781634,1.07435527024149,0.57386499620653,0.882365676478062,0.695603506861264|short_description=p3@Srpk2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20817 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6P5E1 | |||
|association_with_transcript=0bp_to_ENSMUST00000171854,uc008wqf.1_5end | |||
|cluster_id=chr5:23182252..23182307,- | |||
|description=CAGE_peak_3_at_Srpk2_5end | |||
|id=chr5:23182252..23182307,- | |||
|ontology_enrichment_celltype=CL:0000117!4.23e-09!23;CL:0000337!4.23e-09!23;CL:0000393!5.26e-08!39;CL:0000211!5.26e-08!39;CL:0000540!1.46e-07!33;CL:0000047!1.46e-07!33;CL:0000031!1.46e-07!33;CL:0000404!1.46e-07!33;CL:0000055!9.71e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.16e-11,23;CL:0000337,4.16e-11,23;CL:0000540,8.76e-07,33;CL:0000047,8.76e-07,33;CL:0000031,8.76e-07,33;CL:0000404,8.76e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.22e-20!73;UBERON:0005743!1.22e-20!73;UBERON:0000073!5.59e-20!75;UBERON:0001016!5.59e-20!75;UBERON:0001049!1.47e-19!52;UBERON:0005068!1.47e-19!52;UBERON:0006241!1.47e-19!52;UBERON:0007135!1.47e-19!52;UBERON:0000033!1.23e-18!63;UBERON:0004121!1.36e-18!102;UBERON:0000924!1.36e-18!102;UBERON:0006601!1.36e-18!102;UBERON:0000955!1.55e-18!50;UBERON:0006238!1.55e-18!50;UBERON:0002616!6.08e-18!49;UBERON:0002346!2.58e-17!71;UBERON:0003075!2.58e-17!71;UBERON:0007284!2.58e-17!71;UBERON:0002020!3.28e-15!34;UBERON:0003080!8.31e-14!40;UBERON:0003056!9.58e-14!49;UBERON:0002780!4.05e-13!39;UBERON:0001890!4.05e-13!39;UBERON:0006240!4.05e-13!39;UBERON:0002791!2.39e-12!29;UBERON:0003528!2.39e-12!29;UBERON:0001893!2.39e-12!29;UBERON:0007811!1.31e-08!86;UBERON:0000956!6.86e-08!21;UBERON:0001869!6.86e-08!21;UBERON:0000203!6.86e-08!21;UBERON:0002619!7.06e-08!17;UBERON:0000153!2.27e-07!94;UBERON:0002021!4.11e-07!10;UBERON:0000411!4.11e-07!10;UBERON:0001950!4.11e-07!10;UBERON:0000468!9.30e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.44e-26,54;UBERON:0001049,4.77e-24,52;UBERON:0005068,4.77e-24,52;UBERON:0006241,4.77e-24,52;UBERON:0007135,4.77e-24,52;UBERON:0001017,4.00e-23,73;UBERON:0002346,1.09e-22,64;UBERON:0003075,1.09e-22,64;UBERON:0007284,1.09e-22,64;UBERON:0001016,5.00e-22,75;UBERON:0002020,3.57e-20,34;UBERON:0000955,1.33e-19,47;UBERON:0006238,1.33e-19,47;UBERON:0010371,6.32e-19,73;UBERON:0002616,8.89e-19,46;UBERON:0004121,2.34e-18,95;UBERON:0000924,2.34e-18,95;UBERON:0006601,2.34e-18,95;UBERON:0003528,6.65e-16,29;UBERON:0002791,6.65e-16,29;UBERON:0001893,6.65e-16,29;UBERON:0003056,6.97e-16,49;UBERON:0003080,3.22e-15,40;UBERON:0010314,1.69e-14,92;UBERON:0002780,2.86e-14,39;UBERON:0001890,2.86e-14,39;UBERON:0006240,2.86e-14,39;UBERON:0002619,5.66e-11,17;UBERON:0002021,4.78e-10,10;UBERON:0000411,4.78e-10,10;UBERON:0001950,4.78e-10,10;UBERON:0003076,6.10e-10,12;UBERON:0003057,6.10e-10,12;UBERON:0000956,2.34e-09,21;UBERON:0001869,2.34e-09,21;UBERON:0000203,2.34e-09,21;UBERON:0002420,2.38e-08,8;UBERON:0007245,2.38e-08,8;UBERON:0010009,2.38e-08,8;UBERON:0010011,2.38e-08,8;UBERON:0000454,2.38e-08,8;UBERON:0002240,9.75e-07,6;UBERON:0005174,9.75e-07,6;UBERON:0001137,9.75e-07,6 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,1.52065396829272,0.550640256485045,0,1.74420125104357,2.19686182734472,1.36100929351998,0.699932108126813,0,0,0,0,0.257259436035947,0.573066879877513,1.03134418455488,1.41621522601718,2.11596391708813,3.80298842103708,0,0,0.449949858640699,0,0,1.19840044207362,0,0.207379224616955,0.540023753326763,0.841299845405528,5.42736870367227,7.28866185140325,0.61245399607477,1.34183659425531,0,12.1127469099328,15.9609172606485,16.2822925251618,3.29715719325485,5.03182039813253,2.6045668527838,18.1468949350898,11.2552522006336,14.8214300343506,9.42811473515737,7.83044244395066,4.65998614563251,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.561777680527007,0.511290967734173,0.259786004602869,0,0.422530259330042,1.28326477414318,0,7.11066703153331,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0,0.230615497256059,0.904335843315735,1.29347577849275,0.502666365318702,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,9.07620470735796,8.16842156572475,0,0,0,0,20.8208988772704,8.6925114535539,6.03140890141749,7.99591872884472,6.64860189058859,18.90871205492,11.1946471516753,0.712875546952214,0.124406970610093,0,1.05220927943237,0,0,0.540186389416048,1.05493372485001,1.2246569847239,1.2811372028485,1.12442069471675,4.13925393182425,0,0.378212160335639,0,0.876782929710299,0,0.696504333044333,0.61734640922383,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.720248245844059,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,1.07309360559848,1.63471479314037,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,6.72927835405207,8.54108282748061,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0.379335801906163,0.342745537829186,1.1270773567308,0.814605311381257,0.387904974335251,0.841629838683823,1.26473074248515,0.442830443938806,0.941992367048249,0.493588655687202,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0.780534591431195,0.472905432318573,1.10732344824387,0.637819074629948,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.551873492609465,18.3027672586083,17.9333880486071,1.14754461763673,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,7.06906896127976,1.70328102249922,0.35613120733451,1.30309567482861,0.329940245945071,0,0,0.604647113929502,0,0,0.307435147943927,1.29214146584111,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,1.41872186913819,0.535106452806212,1.15184314421485,0.913394847343798,0,0,0.441056796109924,0.49465875882444,0.645857706783622,0.180938774784468,0.358117032009409,0.164140899745061,0,17.9862542950194,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.836353184057875,0.436725127492355,0.269728692769641,1.32245529160537,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,0.598066184175915,0.66183396182839,0.583353565032143,1.42075805825504,2.02747350588934,3.40335992072686,4.6873578543822,6.08184197669123,2.65742532908607,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0.221985953374065,0.0897138566094757,0,0.772758376128762,0.750729901804728,0.549454872801795,0.214368379079066,0,9.60078132449013,7.36520378411483,13.1765968091061,2.57779773515531,8.90607275701835,12.0863023582352,4.72515750162264,4.05289082901798,8.60970577069989,6.21312374102184,0.415149390336707,0.798049746802062,0.341467211508268,1.21553358534147,1.25767897576789,1.83843508450014,2.00022055021454,0,1.28367683836726,2.02157769411038,2.28131369901216,2.26351609663291,1.03005658216871,0.89635213366817,1.03383844120104,0.952587382566147,1.27472758539341,1.54327376370964,0.412085900803307,0.735994600671987,1.37147700954166,1.4198064492747,1.66905332963125,1.0174249164263,1.41164070622996,1.18460451048347,1.64635175585495,1.57841826862706,0.814824683075171,1.12228454331548,0.830445126869219,1.77308068276014,2.86461730218783,1.23949472948773,1.35034627686799,2.74791635731741,0.935726433781634,1.07435527024149,0.57386499620653,0.882365676478062,0.695603506861264 | |||
|short_description=p3@Srpk2 | |||
}} |
Revision as of 04:50, 4 August 2015
Short description: | p3@Srpk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Srpk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000171854, uc008wqf.1_5end |
EntrezGene: | 20817 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.16e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.16e-11 | 23 |
neuron | 8.76e-07 | 33 |
neuronal stem cell | 8.76e-07 | 33 |
neuroblast | 8.76e-07 | 33 |
electrically signaling cell | 8.76e-07 | 33 |