FFCP PHASE1:Mm9::chr14:31951544..31951561,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=935|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:31951544..31951561,+|id=chr14:31951544..31951561,+|ontology_enrichment_celltype=CL:0000117!1.27e-07!23;CL:0000337!1.27e-07!23|ontology_enrichment_celltype_v019_2=CL:0002610,6.22e-15,3;CL:0002614,2.18e-14,3;CL:0000117,7.29e-12,23;CL:0000337,7.29e-12,23;CL:0002611,7.03e-10,2;CL:0000540,6.03e-08,33;CL:0000047,6.03e-08,33;CL:0000031,6.03e-08,33;CL:0000404,6.03e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.41e-18!73;UBERON:0005743!1.41e-18!73;UBERON:0001049!2.96e-18!52;UBERON:0005068!2.96e-18!52;UBERON:0006241!2.96e-18!52;UBERON:0007135!2.96e-18!52;UBERON:0002616!1.26e-17!49;UBERON:0000073!1.44e-17!75;UBERON:0001016!1.44e-17!75;UBERON:0000955!5.68e-17!50;UBERON:0006238!5.68e-17!50;UBERON:0000033!2.70e-14!63;UBERON:0002020!7.24e-13!34;UBERON:0002346!2.13e-12!71;UBERON:0003075!2.13e-12!71;UBERON:0007284!2.13e-12!71;UBERON:0003080!6.36e-12!40;UBERON:0004121!1.21e-11!102;UBERON:0000924!1.21e-11!102;UBERON:0006601!1.21e-11!102;UBERON:0002780!3.02e-11!39;UBERON:0001890!3.02e-11!39;UBERON:0006240!3.02e-11!39;UBERON:0002791!1.24e-10!29;UBERON:0003528!1.24e-10!29;UBERON:0001893!1.24e-10!29;UBERON:0003056!4.79e-10!49;UBERON:0000025!1.25e-09!114;UBERON:0004111!1.08e-08!122;UBERON:0007811!1.90e-08!86;UBERON:0000153!5.58e-08!94;UBERON:0003076!1.73e-07!12;UBERON:0003057!1.73e-07!12;UBERON:0000956!3.95e-07!21;UBERON:0001869!3.95e-07!21;UBERON:0000203!3.95e-07!21;UBERON:0002298!6.93e-07!6;UBERON:0002021!7.91e-07!10;UBERON:0000411!7.91e-07!10;UBERON:0001950!7.91e-07!10;UBERON:0002619!8.30e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-21,54;UBERON:0003076,1.05e-17,12;UBERON:0003057,1.05e-17,12;UBERON:0001017,1.96e-17,73;UBERON:0001049,5.45e-17,52;UBERON:0005068,5.45e-17,52;UBERON:0006241,5.45e-17,52;UBERON:0007135,5.45e-17,52;UBERON:0001016,6.74e-17,75;UBERON:0004684,6.22e-15,3;UBERON:0002275,6.22e-15,3;UBERON:0002038,2.18e-14,3;UBERON:0009663,2.18e-14,3;UBERON:0009661,2.18e-14,3;UBERON:0000125,2.18e-14,3;UBERON:0002308,2.18e-14,3;UBERON:0002346,2.38e-13,64;UBERON:0003075,2.38e-13,64;UBERON:0007284,2.38e-13,64;UBERON:0004121,9.30e-13,95;UBERON:0000924,9.30e-13,95;UBERON:0006601,9.30e-13,95;UBERON:0004733,2.45e-12,6;UBERON:0004732,2.45e-12,6;UBERON:0002028,2.45e-12,6;UBERON:0007277,2.45e-12,6;UBERON:0002616,4.16e-12,46;UBERON:0000955,8.27e-12,47;UBERON:0006238,8.27e-12,47;UBERON:0010371,2.12e-11,73;UBERON:0002950,6.38e-11,4;UBERON:0001891,6.38e-11,4;UBERON:0009616,6.38e-11,4;UBERON:0010286,6.38e-11,4;UBERON:0001896,3.07e-10,2;UBERON:0002298,3.07e-10,2;UBERON:0005290,3.07e-10,2;UBERON:0010096,3.07e-10,2;UBERON:0002256,7.03e-10,2;UBERON:0002420,3.17e-09,8;UBERON:0007245,3.17e-09,8;UBERON:0010009,3.17e-09,8;UBERON:0010011,3.17e-09,8;UBERON:0000454,3.17e-09,8;UBERON:0000025,1.37e-08,114;UBERON:0010314,1.57e-08,92;UBERON:0004111,7.68e-08,122;UBERON:0002020,1.89e-07,34;UBERON:0002240,2.93e-07,6;UBERON:0005174,2.93e-07,6;UBERON:0001137,2.93e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.103689612308478,0.135005938331691,0,1.42825492201902,2.42955395046775,0,0.287536413054709,0,4.40463523997555,3.44755812830007,3.5329502648936,0.263772575460388,0.182975287204819,0,4.74611098302348,2.25105044012672,1.5279824777681,0.589257170947335,0.711858403995515,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,2.04946557908083,1.67557365450764,0,0.11981512450592,0,0,0.898743836428936,1.37250180845588,0.251308704225729,0.695297280769106,0.511430914660661,1.24672826735736,1.62241263067758,0,0,0,0,0.130120442962704,0,0,0.30140963567143,0,0,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0.568326998791185,0,0,0,0,0,0,0.465067889500816,0,0,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,4.6263788684108,0.823236899034275,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,0,0.325929952884052,0.339490171550376,0,0.335012514883631,0.238043640886014,0,0.788175720530955,0.221464689648775,0.318909537314974,0.655453258862952,1.03610989119537,1.01254341007058,0,0.54390568381871,0,0.275936746304732,2.40825884981688,2.81308047821288,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0.356737635204141,0,0,0,0,0,0,0,0,0.119372344003136,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0.920650473014354,0.572895513439397,1.20297227640581,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.290692833264657,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0|short_description=p@chr14:31951544..31951561,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=935 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:31951544..31951561,+ | |||
|description=CAGE_peak_at_chr14:31951544..31951561,+ | |||
|id=chr14:31951544..31951561,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.27e-07!23;CL:0000337!1.27e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.22e-15,3;CL:0002614,2.18e-14,3;CL:0000117,7.29e-12,23;CL:0000337,7.29e-12,23;CL:0002611,7.03e-10,2;CL:0000540,6.03e-08,33;CL:0000047,6.03e-08,33;CL:0000031,6.03e-08,33;CL:0000404,6.03e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.41e-18!73;UBERON:0005743!1.41e-18!73;UBERON:0001049!2.96e-18!52;UBERON:0005068!2.96e-18!52;UBERON:0006241!2.96e-18!52;UBERON:0007135!2.96e-18!52;UBERON:0002616!1.26e-17!49;UBERON:0000073!1.44e-17!75;UBERON:0001016!1.44e-17!75;UBERON:0000955!5.68e-17!50;UBERON:0006238!5.68e-17!50;UBERON:0000033!2.70e-14!63;UBERON:0002020!7.24e-13!34;UBERON:0002346!2.13e-12!71;UBERON:0003075!2.13e-12!71;UBERON:0007284!2.13e-12!71;UBERON:0003080!6.36e-12!40;UBERON:0004121!1.21e-11!102;UBERON:0000924!1.21e-11!102;UBERON:0006601!1.21e-11!102;UBERON:0002780!3.02e-11!39;UBERON:0001890!3.02e-11!39;UBERON:0006240!3.02e-11!39;UBERON:0002791!1.24e-10!29;UBERON:0003528!1.24e-10!29;UBERON:0001893!1.24e-10!29;UBERON:0003056!4.79e-10!49;UBERON:0000025!1.25e-09!114;UBERON:0004111!1.08e-08!122;UBERON:0007811!1.90e-08!86;UBERON:0000153!5.58e-08!94;UBERON:0003076!1.73e-07!12;UBERON:0003057!1.73e-07!12;UBERON:0000956!3.95e-07!21;UBERON:0001869!3.95e-07!21;UBERON:0000203!3.95e-07!21;UBERON:0002298!6.93e-07!6;UBERON:0002021!7.91e-07!10;UBERON:0000411!7.91e-07!10;UBERON:0001950!7.91e-07!10;UBERON:0002619!8.30e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-21,54;UBERON:0003076,1.05e-17,12;UBERON:0003057,1.05e-17,12;UBERON:0001017,1.96e-17,73;UBERON:0001049,5.45e-17,52;UBERON:0005068,5.45e-17,52;UBERON:0006241,5.45e-17,52;UBERON:0007135,5.45e-17,52;UBERON:0001016,6.74e-17,75;UBERON:0004684,6.22e-15,3;UBERON:0002275,6.22e-15,3;UBERON:0002038,2.18e-14,3;UBERON:0009663,2.18e-14,3;UBERON:0009661,2.18e-14,3;UBERON:0000125,2.18e-14,3;UBERON:0002308,2.18e-14,3;UBERON:0002346,2.38e-13,64;UBERON:0003075,2.38e-13,64;UBERON:0007284,2.38e-13,64;UBERON:0004121,9.30e-13,95;UBERON:0000924,9.30e-13,95;UBERON:0006601,9.30e-13,95;UBERON:0004733,2.45e-12,6;UBERON:0004732,2.45e-12,6;UBERON:0002028,2.45e-12,6;UBERON:0007277,2.45e-12,6;UBERON:0002616,4.16e-12,46;UBERON:0000955,8.27e-12,47;UBERON:0006238,8.27e-12,47;UBERON:0010371,2.12e-11,73;UBERON:0002950,6.38e-11,4;UBERON:0001891,6.38e-11,4;UBERON:0009616,6.38e-11,4;UBERON:0010286,6.38e-11,4;UBERON:0001896,3.07e-10,2;UBERON:0002298,3.07e-10,2;UBERON:0005290,3.07e-10,2;UBERON:0010096,3.07e-10,2;UBERON:0002256,7.03e-10,2;UBERON:0002420,3.17e-09,8;UBERON:0007245,3.17e-09,8;UBERON:0010009,3.17e-09,8;UBERON:0010011,3.17e-09,8;UBERON:0000454,3.17e-09,8;UBERON:0000025,1.37e-08,114;UBERON:0010314,1.57e-08,92;UBERON:0004111,7.68e-08,122;UBERON:0002020,1.89e-07,34;UBERON:0002240,2.93e-07,6;UBERON:0005174,2.93e-07,6;UBERON:0001137,2.93e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.103689612308478,0.135005938331691,0,1.42825492201902,2.42955395046775,0,0.287536413054709,0,4.40463523997555,3.44755812830007,3.5329502648936,0.263772575460388,0.182975287204819,0,4.74611098302348,2.25105044012672,1.5279824777681,0.589257170947335,0.711858403995515,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,2.04946557908083,1.67557365450764,0,0.11981512450592,0,0,0.898743836428936,1.37250180845588,0.251308704225729,0.695297280769106,0.511430914660661,1.24672826735736,1.62241263067758,0,0,0,0,0.130120442962704,0,0,0.30140963567143,0,0,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0.568326998791185,0,0,0,0,0,0,0.465067889500816,0,0,0,0,0,0.292399974850665,0.219550115291051,0.134206418760372,4.6263788684108,0.823236899034275,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,0,0.325929952884052,0.339490171550376,0,0.335012514883631,0.238043640886014,0,0.788175720530955,0.221464689648775,0.318909537314974,0.655453258862952,1.03610989119537,1.01254341007058,0,0.54390568381871,0,0.275936746304732,2.40825884981688,2.81308047821288,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0.356737635204141,0,0,0,0,0,0,0,0,0.119372344003136,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0.920650473014354,0.572895513439397,1.20297227640581,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.290692833264657,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p@chr14:31951544..31951561,+ | |||
}} |
Latest revision as of 05:50, 4 August 2015
Short description: | p@chr14:31951544..31951561, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:31951544..31951561, + |
Coexpression cluster: | MCL_coexpression_mm9:935 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.22e-15 | 3 |
neuron of the substantia nigra | 2.18e-14 | 3 |
CNS neuron (sensu Vertebrata) | 7.29e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.29e-12 | 23 |
neuron of the dorsal spinal cord | 7.03e-10 | 2 |
neuron | 6.03e-08 | 33 |
neuronal stem cell | 6.03e-08 | 33 |
neuroblast | 6.03e-08 | 33 |
electrically signaling cell | 6.03e-08 | 33 |