FFCP PHASE1:Mm9::chr8:88224895..88224924,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=443|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:88224895..88224924,+|id=chr8:88224895..88224924,+|ontology_enrichment_celltype=CL:0000221!3.09e-15!44;CL:0000133!3.09e-15!44;CL:0002319!1.13e-14!43;CL:0000540!7.97e-13!33;CL:0000047!7.97e-13!33;CL:0000031!7.97e-13!33;CL:0000404!7.97e-13!33;CL:0000055!1.23e-11!50;CL:0000393!2.43e-10!39;CL:0000211!2.43e-10!39;CL:0000117!8.30e-08!23;CL:0000337!8.30e-08!23|ontology_enrichment_celltype_v019_2=CL:0000221,1.79e-23,44;CL:0000133,1.79e-23,44;CL:0002319,1.66e-22,43;CL:0000540,1.14e-19,33;CL:0000047,1.14e-19,33;CL:0000031,1.14e-19,33;CL:0000404,1.14e-19,33;CL:0000393,3.09e-15,39;CL:0000211,3.09e-15,39;CL:0000117,4.26e-11,23;CL:0000337,4.26e-11,23;CL:0002321,1.34e-10,70;CL:0000107,1.31e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.87e-32!73;UBERON:0005743!7.87e-32!73;UBERON:0000073!2.32e-31!75;UBERON:0001016!2.32e-31!75;UBERON:0004121!3.84e-28!102;UBERON:0000924!3.84e-28!102;UBERON:0006601!3.84e-28!102;UBERON:0002346!3.40e-26!71;UBERON:0003075!3.40e-26!71;UBERON:0007284!3.40e-26!71;UBERON:0001049!2.10e-23!52;UBERON:0005068!2.10e-23!52;UBERON:0006241!2.10e-23!52;UBERON:0007135!2.10e-23!52;UBERON:0000033!5.31e-21!63;UBERON:0000955!3.98e-20!50;UBERON:0006238!3.98e-20!50;UBERON:0002616!1.56e-19!49;UBERON:0003056!7.27e-17!49;UBERON:0003080!4.07e-16!40;UBERON:0002780!1.08e-15!39;UBERON:0001890!1.08e-15!39;UBERON:0006240!1.08e-15!39;UBERON:0002020!3.30e-15!34;UBERON:0000153!2.65e-14!94;UBERON:0007811!3.16e-13!86;UBERON:0002791!2.80e-12!29;UBERON:0003528!2.80e-12!29;UBERON:0001893!2.80e-12!29;UBERON:0000956!1.29e-08!21;UBERON:0001869!1.29e-08!21;UBERON:0000203!1.29e-08!21;UBERON:0003076!4.73e-08!12;UBERON:0003057!4.73e-08!12;UBERON:0002619!1.42e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.71e-49,73;UBERON:0001016,1.91e-47,75;UBERON:0004121,3.35e-39,95;UBERON:0000924,3.35e-39,95;UBERON:0006601,3.35e-39,95;UBERON:0001049,2.83e-33,52;UBERON:0005068,2.83e-33,52;UBERON:0006241,2.83e-33,52;UBERON:0007135,2.83e-33,52;UBERON:0002346,2.93e-33,64;UBERON:0003075,2.93e-33,64;UBERON:0007284,2.93e-33,64;UBERON:0000073,5.11e-33,54;UBERON:0010371,4.55e-30,73;UBERON:0000955,6.04e-28,47;UBERON:0006238,6.04e-28,47;UBERON:0002616,5.95e-27,46;UBERON:0010314,1.79e-23,92;UBERON:0002020,7.47e-22,34;UBERON:0003080,3.96e-21,40;UBERON:0002780,2.04e-20,39;UBERON:0001890,2.04e-20,39;UBERON:0006240,2.04e-20,39;UBERON:0003056,4.99e-19,49;UBERON:0003528,6.53e-17,29;UBERON:0002791,6.53e-17,29;UBERON:0001893,6.53e-17,29;UBERON:0003076,6.39e-13,12;UBERON:0003057,6.39e-13,12;UBERON:0000956,9.22e-12,21;UBERON:0001869,9.22e-12,21;UBERON:0000203,9.22e-12,21;UBERON:0002619,7.80e-11,17;UBERON:0002410,1.31e-09,9;UBERON:0002021,2.99e-09,10;UBERON:0000411,2.99e-09,10;UBERON:0001950,2.99e-09,10;UBERON:0011216,5.29e-08,194;UBERON:0000025,9.86e-08,114;UBERON:0004111,1.35e-07,122;UBERON:0000010,2.01e-07,11;UBERON:0002240,2.46e-07,6;UBERON:0005174,2.46e-07,6;UBERON:0001137,2.46e-07,6;UBERON:0004733,4.21e-07,6;UBERON:0004732,4.21e-07,6;UBERON:0002028,4.21e-07,6;UBERON:0007277,4.21e-07,6|phase1_expression=1.44133962394315,0,0.454999239389536,0.30246421130683,0,0,0,0.258246646883153,0.140788722151667,0,0.34243593645101,0.239316476986009,0.171200729931206,0,0,0.404950534779652,0,0.315462165358238,0,0,0.340173160604279,1.29078236561151,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0.837063261473815,0,0,0,0,0.485510353031154,0,0.202753862439029,0.183546752161682,3.12956537739216,1.96222640742402,2.85592037554813,1.74986909166855,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,1.61853168687678,2.64495489636016,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,2.99600110518405,6.91592949578798,0.725827286159344,1.08004750665353,1.05162480675691,1.99955689082663,2.20868540951614,0.734944795289724,1.24599112323707,0,0,1.78762273319263,1.53606533256243,1.71452174049252,2.56165402086747,2.08365348222704,0.837548997004143,2.25105044012672,2.13917546887534,2.65165726926301,2.56269025438385,2.60959224155421,0.302904773332736,0.453429360640713,0,0,0,0,0,0,0,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0.253359865475099,0,0,0,1.48442139064825,1.21439728736295,0.304465478312141,0,1.20578112442098,0.940709657085638,0.879666139307728,0,0.433798070759735,0.884610551949874,0.161766849947409,0,0,0,2.92780797011547,3.35114730901528,0.255457055208591,0.11981512450592,0,0.127070227073065,1.49790639404823,2.74500361691176,1.38219787324151,2.25971616249959,1.79000820131231,2.49345653471472,1.46017136760982,0.305518091550949,0.248813941220186,0,1.47309299120532,0.390361328888111,0.919608417733892,1.80062129805349,0.60281927134286,0.136072998302656,0.512454881139399,0.843315521037559,1.29351685369508,0.646703978798527,0.945530400839096,1.58356011747554,0.876782929710299,1.39023624612799,1.0447564995665,0.411564272815887,0.59710280045548,0,0,0.284163499395593,0.621377317606506,0.469052119962192,0.540186184383045,0.710234206755631,0.393528463494808,0,0.697601834251224,0,0.233530684734339,0.329119699826961,0,0.162137619091711,0.438599962275997,0,0.268412837520744,2.3131894342054,1.02904612379284,0,0,0.853153002140936,1.39342003116263,0.515469845288373,0.201683524623343,0.444756087689741,0.760902504450237,0,0,0,0,0,0,0,0.199141273254367,0.758671603812327,0.456994050438915,1.1270773567308,0.407302655690628,0.581857461502877,0.280543279561274,0.569128834118316,0.442830443938806,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0.502518772325447,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,1.28440471990234,1.87538698547525,0,0,1.26203287766503,2.34263246577983,1.93881057959519,1.67278158566786,1.78238939265915,2.26461224631066,2.83367491172426,3.50707029493574,3.16230222357219,2.24924921495265,0.425820255624806,0.890328018336276,0.325773918707152,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,4.08527526904546,1.26042765821917,0.517434735131018,0.643011105094777,1.95074257006501,1.78368817602071,2.30368628842969,0.608929898229199,0.23467170806371,0.21183207086382,0,0.32977250588296,0,0.301564624640779,0.119372344003136,0,0,2.22510362412612,0,0.82554747185289,0.370389054739423,0.188368457004691,0,0.228778173206523,0.339956859987711,0.839708713941948,0.276399947608848,0,0.316335993581135,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.897099276263873,1.32366792365678,0.972255941720238,0.774958940866387,1.18269287843545,0.58678619322877,1.0416350787516,1.15345278868282,0.966336483304024,0.576060012515731,0.948033361884535,0.202725215290164,0.410843828659309,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.403865799792591,0.304827226619999,0.907435666231565,0.0974578807397524,0.769694733122636,0.467507608726276,0.453460767230423,0,0,0,0.772758376128762,0.375364950902364,0.549454872801795,0,0,4.51801474093653,1.84130094602871,4.01026859407578,2.57779773515531,2.05524755931193,0.755393897389701,2.70009000092722,1.80128481289688,4.07828168085784,2.07104124700728,0.31136204275253,1.19707462020309,0.682934423016537,0.729320151204882,0.209613162627982,0.919217542250071,0.222246727801615,1.23621034343337,0.64183841918363,1.26348605881899,1.77435509923168,0.943131706930381,1.591905626988,0.960377286073039,0.459483751644906,0.952587382566147,0.579421629724277,0.77163688185482,0.824171801606613,1.47198920134397,0.685738504770831,0.70990322463735,0,1.16277133305863,0.564656282491984,0.169229215783353,0.914639864363863,0.789209134313529,0.679020569229309,0,1.06771516311757,0.29551344712669,0.409231043169689,0.77468420592983,0.385813221962283,0,0,1.07435527024149,0.382576664137687,0,0|short_description=p@chr8:88224895..88224924,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=443 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:88224895..88224924,+ | |||
|description=CAGE_peak_at_chr8:88224895..88224924,+ | |||
|id=chr8:88224895..88224924,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.09e-15!44;CL:0000133!3.09e-15!44;CL:0002319!1.13e-14!43;CL:0000540!7.97e-13!33;CL:0000047!7.97e-13!33;CL:0000031!7.97e-13!33;CL:0000404!7.97e-13!33;CL:0000055!1.23e-11!50;CL:0000393!2.43e-10!39;CL:0000211!2.43e-10!39;CL:0000117!8.30e-08!23;CL:0000337!8.30e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.79e-23,44;CL:0000133,1.79e-23,44;CL:0002319,1.66e-22,43;CL:0000540,1.14e-19,33;CL:0000047,1.14e-19,33;CL:0000031,1.14e-19,33;CL:0000404,1.14e-19,33;CL:0000393,3.09e-15,39;CL:0000211,3.09e-15,39;CL:0000117,4.26e-11,23;CL:0000337,4.26e-11,23;CL:0002321,1.34e-10,70;CL:0000107,1.31e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.87e-32!73;UBERON:0005743!7.87e-32!73;UBERON:0000073!2.32e-31!75;UBERON:0001016!2.32e-31!75;UBERON:0004121!3.84e-28!102;UBERON:0000924!3.84e-28!102;UBERON:0006601!3.84e-28!102;UBERON:0002346!3.40e-26!71;UBERON:0003075!3.40e-26!71;UBERON:0007284!3.40e-26!71;UBERON:0001049!2.10e-23!52;UBERON:0005068!2.10e-23!52;UBERON:0006241!2.10e-23!52;UBERON:0007135!2.10e-23!52;UBERON:0000033!5.31e-21!63;UBERON:0000955!3.98e-20!50;UBERON:0006238!3.98e-20!50;UBERON:0002616!1.56e-19!49;UBERON:0003056!7.27e-17!49;UBERON:0003080!4.07e-16!40;UBERON:0002780!1.08e-15!39;UBERON:0001890!1.08e-15!39;UBERON:0006240!1.08e-15!39;UBERON:0002020!3.30e-15!34;UBERON:0000153!2.65e-14!94;UBERON:0007811!3.16e-13!86;UBERON:0002791!2.80e-12!29;UBERON:0003528!2.80e-12!29;UBERON:0001893!2.80e-12!29;UBERON:0000956!1.29e-08!21;UBERON:0001869!1.29e-08!21;UBERON:0000203!1.29e-08!21;UBERON:0003076!4.73e-08!12;UBERON:0003057!4.73e-08!12;UBERON:0002619!1.42e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.71e-49,73;UBERON:0001016,1.91e-47,75;UBERON:0004121,3.35e-39,95;UBERON:0000924,3.35e-39,95;UBERON:0006601,3.35e-39,95;UBERON:0001049,2.83e-33,52;UBERON:0005068,2.83e-33,52;UBERON:0006241,2.83e-33,52;UBERON:0007135,2.83e-33,52;UBERON:0002346,2.93e-33,64;UBERON:0003075,2.93e-33,64;UBERON:0007284,2.93e-33,64;UBERON:0000073,5.11e-33,54;UBERON:0010371,4.55e-30,73;UBERON:0000955,6.04e-28,47;UBERON:0006238,6.04e-28,47;UBERON:0002616,5.95e-27,46;UBERON:0010314,1.79e-23,92;UBERON:0002020,7.47e-22,34;UBERON:0003080,3.96e-21,40;UBERON:0002780,2.04e-20,39;UBERON:0001890,2.04e-20,39;UBERON:0006240,2.04e-20,39;UBERON:0003056,4.99e-19,49;UBERON:0003528,6.53e-17,29;UBERON:0002791,6.53e-17,29;UBERON:0001893,6.53e-17,29;UBERON:0003076,6.39e-13,12;UBERON:0003057,6.39e-13,12;UBERON:0000956,9.22e-12,21;UBERON:0001869,9.22e-12,21;UBERON:0000203,9.22e-12,21;UBERON:0002619,7.80e-11,17;UBERON:0002410,1.31e-09,9;UBERON:0002021,2.99e-09,10;UBERON:0000411,2.99e-09,10;UBERON:0001950,2.99e-09,10;UBERON:0011216,5.29e-08,194;UBERON:0000025,9.86e-08,114;UBERON:0004111,1.35e-07,122;UBERON:0000010,2.01e-07,11;UBERON:0002240,2.46e-07,6;UBERON:0005174,2.46e-07,6;UBERON:0001137,2.46e-07,6;UBERON:0004733,4.21e-07,6;UBERON:0004732,4.21e-07,6;UBERON:0002028,4.21e-07,6;UBERON:0007277,4.21e-07,6 | |||
|phase1_expression=1.44133962394315,0,0.454999239389536,0.30246421130683,0,0,0,0.258246646883153,0.140788722151667,0,0.34243593645101,0.239316476986009,0.171200729931206,0,0,0.404950534779652,0,0.315462165358238,0,0,0.340173160604279,1.29078236561151,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0.837063261473815,0,0,0,0,0.485510353031154,0,0.202753862439029,0.183546752161682,3.12956537739216,1.96222640742402,2.85592037554813,1.74986909166855,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,1.61853168687678,2.64495489636016,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,2.99600110518405,6.91592949578798,0.725827286159344,1.08004750665353,1.05162480675691,1.99955689082663,2.20868540951614,0.734944795289724,1.24599112323707,0,0,1.78762273319263,1.53606533256243,1.71452174049252,2.56165402086747,2.08365348222704,0.837548997004143,2.25105044012672,2.13917546887534,2.65165726926301,2.56269025438385,2.60959224155421,0.302904773332736,0.453429360640713,0,0,0,0,0,0,0,0,0,0,2.25349471642689,0,0,0,0.216491041011214,0.253359865475099,0,0,0,1.48442139064825,1.21439728736295,0.304465478312141,0,1.20578112442098,0.940709657085638,0.879666139307728,0,0.433798070759735,0.884610551949874,0.161766849947409,0,0,0,2.92780797011547,3.35114730901528,0.255457055208591,0.11981512450592,0,0.127070227073065,1.49790639404823,2.74500361691176,1.38219787324151,2.25971616249959,1.79000820131231,2.49345653471472,1.46017136760982,0.305518091550949,0.248813941220186,0,1.47309299120532,0.390361328888111,0.919608417733892,1.80062129805349,0.60281927134286,0.136072998302656,0.512454881139399,0.843315521037559,1.29351685369508,0.646703978798527,0.945530400839096,1.58356011747554,0.876782929710299,1.39023624612799,1.0447564995665,0.411564272815887,0.59710280045548,0,0,0.284163499395593,0.621377317606506,0.469052119962192,0.540186184383045,0.710234206755631,0.393528463494808,0,0.697601834251224,0,0.233530684734339,0.329119699826961,0,0.162137619091711,0.438599962275997,0,0.268412837520744,2.3131894342054,1.02904612379284,0,0,0.853153002140936,1.39342003116263,0.515469845288373,0.201683524623343,0.444756087689741,0.760902504450237,0,0,0,0,0,0,0,0.199141273254367,0.758671603812327,0.456994050438915,1.1270773567308,0.407302655690628,0.581857461502877,0.280543279561274,0.569128834118316,0.442830443938806,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0.502518772325447,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,1.28440471990234,1.87538698547525,0,0,1.26203287766503,2.34263246577983,1.93881057959519,1.67278158566786,1.78238939265915,2.26461224631066,2.83367491172426,3.50707029493574,3.16230222357219,2.24924921495265,0.425820255624806,0.890328018336276,0.325773918707152,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,4.08527526904546,1.26042765821917,0.517434735131018,0.643011105094777,1.95074257006501,1.78368817602071,2.30368628842969,0.608929898229199,0.23467170806371,0.21183207086382,0,0.32977250588296,0,0.301564624640779,0.119372344003136,0,0,2.22510362412612,0,0.82554747185289,0.370389054739423,0.188368457004691,0,0.228778173206523,0.339956859987711,0.839708713941948,0.276399947608848,0,0.316335993581135,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.897099276263873,1.32366792365678,0.972255941720238,0.774958940866387,1.18269287843545,0.58678619322877,1.0416350787516,1.15345278868282,0.966336483304024,0.576060012515731,0.948033361884535,0.202725215290164,0.410843828659309,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.403865799792591,0.304827226619999,0.907435666231565,0.0974578807397524,0.769694733122636,0.467507608726276,0.453460767230423,0,0,0,0.772758376128762,0.375364950902364,0.549454872801795,0,0,4.51801474093653,1.84130094602871,4.01026859407578,2.57779773515531,2.05524755931193,0.755393897389701,2.70009000092722,1.80128481289688,4.07828168085784,2.07104124700728,0.31136204275253,1.19707462020309,0.682934423016537,0.729320151204882,0.209613162627982,0.919217542250071,0.222246727801615,1.23621034343337,0.64183841918363,1.26348605881899,1.77435509923168,0.943131706930381,1.591905626988,0.960377286073039,0.459483751644906,0.952587382566147,0.579421629724277,0.77163688185482,0.824171801606613,1.47198920134397,0.685738504770831,0.70990322463735,0,1.16277133305863,0.564656282491984,0.169229215783353,0.914639864363863,0.789209134313529,0.679020569229309,0,1.06771516311757,0.29551344712669,0.409231043169689,0.77468420592983,0.385813221962283,0,0,1.07435527024149,0.382576664137687,0,0 | |||
|short_description=p@chr8:88224895..88224924,+ | |||
}} |
Latest revision as of 07:07, 4 August 2015
Short description: | p@chr8:88224895..88224924, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:88224895..88224924, + |
Coexpression cluster: | MCL_coexpression_mm9:443 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.79e-23 | 44 |
neurectodermal cell | 1.79e-23 | 44 |
neural cell | 1.66e-22 | 43 |
neuron | 1.14e-19 | 33 |
neuronal stem cell | 1.14e-19 | 33 |
neuroblast | 1.14e-19 | 33 |
electrically signaling cell | 1.14e-19 | 33 |
electrically responsive cell | 3.09e-15 | 39 |
electrically active cell | 3.09e-15 | 39 |
CNS neuron (sensu Vertebrata) | 4.26e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.26e-11 | 23 |
embryonic cell | 1.34e-10 | 70 |
autonomic neuron | 1.31e-09 | 9 |