FFCP PHASE1:Mm9::chr10:79761829..79761871,+: Difference between revisions
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{{FFCP|EntrezGene=23805|HGNC=|MCL_coexpression_id=13|UniProt=D3YYQ9|association_with_transcript=0bp_to_ENSMUST00000154212_5end|description=CAGE_peak_2_at_Apc2_5end|id=chr10:79761829..79761871,+|ontology_enrichment_celltype=CL:0000221!1.11e-17!44;CL:0000133!1.11e-17!44;CL:0002319!1.28e-17!43;CL:0000540!1.54e-17!33;CL:0000047!1.54e-17!33;CL:0000031!1.54e-17!33;CL:0000404!1.54e-17!33;CL:0000117!8.21e-16!23;CL:0000337!8.21e-16!23;CL:0000055!1.70e-12!50;CL:0000393!2.09e-12!39;CL:0000211!2.09e-12!39|ontology_enrichment_celltype_v019_2=CL:0000540,1.10e-21,33;CL:0000047,1.10e-21,33;CL:0000031,1.10e-21,33;CL:0000404,1.10e-21,33;CL:0000117,1.65e-19,23;CL:0000337,1.65e-19,23;CL:0000221,3.98e-19,44;CL:0000133,3.98e-19,44;CL:0002319,5.03e-19,43;CL:0000393,3.38e-16,39;CL:0000211,3.38e-16,39;CL:0002321,7.24e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.22e-34!73;UBERON:0005743!6.22e-34!73;UBERON:0000073!1.16e-33!75;UBERON:0001016!1.16e-33!75;UBERON:0004121!6.02e-30!102;UBERON:0000924!6.02e-30!102;UBERON:0006601!6.02e-30!102;UBERON:0002346!1.13e-29!71;UBERON:0003075!1.13e-29!71;UBERON:0007284!1.13e-29!71;UBERON:0001049!1.92e-25!52;UBERON:0005068!1.92e-25!52;UBERON:0006241!1.92e-25!52;UBERON:0007135!1.92e-25!52;UBERON:0000033!5.31e-25!63;UBERON:0000955!1.99e-23!50;UBERON:0006238!1.99e-23!50;UBERON:0002616!6.73e-23!49;UBERON:0003056!2.47e-21!49;UBERON:0002020!1.03e-20!34;UBERON:0003080!1.04e-18!40;UBERON:0002780!4.71e-18!39;UBERON:0001890!4.71e-18!39;UBERON:0006240!4.71e-18!39;UBERON:0002791!3.19e-17!29;UBERON:0003528!3.19e-17!29;UBERON:0001893!3.19e-17!29;UBERON:0000956!2.86e-12!21;UBERON:0001869!2.86e-12!21;UBERON:0000203!2.86e-12!21;UBERON:0007811!1.02e-11!86;UBERON:0000153!5.23e-10!94;UBERON:0002619!9.06e-10!17;UBERON:0003076!2.72e-07!12;UBERON:0003057!2.72e-07!12;UBERON:0002021!4.16e-07!10;UBERON:0000411!4.16e-07!10;UBERON:0001950!4.16e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-38,73;UBERON:0001016,1.21e-37,75;UBERON:0004121,2.26e-34,95;UBERON:0000924,2.26e-34,95;UBERON:0006601,2.26e-34,95;UBERON:0002346,5.41e-34,64;UBERON:0003075,5.41e-34,64;UBERON:0007284,5.41e-34,64;UBERON:0000073,3.80e-30,54;UBERON:0001049,9.24e-29,52;UBERON:0005068,9.24e-29,52;UBERON:0006241,9.24e-29,52;UBERON:0007135,9.24e-29,52;UBERON:0010371,1.92e-28,73;UBERON:0000955,3.13e-24,47;UBERON:0006238,3.13e-24,47;UBERON:0002020,6.32e-24,34;UBERON:0003056,8.89e-24,49;UBERON:0002616,1.38e-23,46;UBERON:0010314,6.91e-22,92;UBERON:0003080,1.97e-20,40;UBERON:0002780,1.25e-19,39;UBERON:0001890,1.25e-19,39;UBERON:0006240,1.25e-19,39;UBERON:0003528,1.41e-19,29;UBERON:0002791,1.41e-19,29;UBERON:0001893,1.41e-19,29;UBERON:0000956,2.06e-13,21;UBERON:0001869,2.06e-13,21;UBERON:0000203,2.06e-13,21;UBERON:0002619,2.51e-10,17;UBERON:0003076,8.81e-09,12;UBERON:0003057,8.81e-09,12;UBERON:0002021,1.50e-08,10;UBERON:0000411,1.50e-08,10;UBERON:0001950,1.50e-08,10;UBERON:0002420,2.07e-07,8;UBERON:0007245,2.07e-07,8;UBERON:0010009,2.07e-07,8;UBERON:0010011,2.07e-07,8;UBERON:0000454,2.07e-07,8|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,5.27268398936633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,2.18025156380447,0.878744730937887,0.58328969722285,0.979904951377538,4.31257693094915,0,0,0,0.257259436035947,0,0,52.6022798234954,55.5440528235635,58.9463205260747,0,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,36.2913643079672,43.4719121428044,35.5449184683836,43.1332986449743,43.2902340265163,34.9098777762619,42.6512346031152,51.4762520501612,23.1243350098716,20.42997409363,19.5080297235429,55.6560134221418,51.599030991759,47.4031167206652,17.3093459380856,16.3201156909187,18.7941844765476,30.3467443037878,37.5861237309632,50.3278503728312,0.302904773332736,1.13357340160178,0,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0,1.69012103732017,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,2.77576522825817,2.43572382649713,2.7673859670727,2.26083960828934,2.23418543557839,0.251333182659351,0,0.289198713839823,0,0,0,0,0,28.3997373101201,32.2547928492721,0,0,0,0,34.4518470631092,29.7375391832107,60.1884346620621,25.0307021076878,31.708716708961,20.5710164113964,24.1739481970959,0.101839363850316,0,0,3.15662783829711,2.99277018814219,5.74755261083682,5.22180176435513,5.72678307775717,7.75616090325138,7.94305065766069,7.40243624021858,6.72628763921441,3.01795190105979,1.70195472151037,1.23165786914764,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.787056926989615,0.462801338662135,0.697601834251224,0.536546802799238,0.934122738937356,0.822799249567402,0.492502392237286,1.29710095273369,0.438599962275997,0.658650345873152,0.939444931322602,25.6553737248235,44.4547925478509,0,0.264450566663544,0.853153002140936,1.85789337488351,1.41754207454303,1.4117846723634,1.77902435075896,0.760902504450237,0,1.4822905925161,0.754005626400808,0.397912944082302,1.16978452271472,0,0,0.59742381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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:23805 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YYQ9 | |||
|association_with_transcript=0bp_to_ENSMUST00000154212_5end | |||
|cluster_id=chr10:79761829..79761871,+ | |||
|description=CAGE_peak_2_at_Apc2_5end | |||
|id=chr10:79761829..79761871,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.11e-17!44;CL:0000133!1.11e-17!44;CL:0002319!1.28e-17!43;CL:0000540!1.54e-17!33;CL:0000047!1.54e-17!33;CL:0000031!1.54e-17!33;CL:0000404!1.54e-17!33;CL:0000117!8.21e-16!23;CL:0000337!8.21e-16!23;CL:0000055!1.70e-12!50;CL:0000393!2.09e-12!39;CL:0000211!2.09e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.10e-21,33;CL:0000047,1.10e-21,33;CL:0000031,1.10e-21,33;CL:0000404,1.10e-21,33;CL:0000117,1.65e-19,23;CL:0000337,1.65e-19,23;CL:0000221,3.98e-19,44;CL:0000133,3.98e-19,44;CL:0002319,5.03e-19,43;CL:0000393,3.38e-16,39;CL:0000211,3.38e-16,39;CL:0002321,7.24e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.22e-34!73;UBERON:0005743!6.22e-34!73;UBERON:0000073!1.16e-33!75;UBERON:0001016!1.16e-33!75;UBERON:0004121!6.02e-30!102;UBERON:0000924!6.02e-30!102;UBERON:0006601!6.02e-30!102;UBERON:0002346!1.13e-29!71;UBERON:0003075!1.13e-29!71;UBERON:0007284!1.13e-29!71;UBERON:0001049!1.92e-25!52;UBERON:0005068!1.92e-25!52;UBERON:0006241!1.92e-25!52;UBERON:0007135!1.92e-25!52;UBERON:0000033!5.31e-25!63;UBERON:0000955!1.99e-23!50;UBERON:0006238!1.99e-23!50;UBERON:0002616!6.73e-23!49;UBERON:0003056!2.47e-21!49;UBERON:0002020!1.03e-20!34;UBERON:0003080!1.04e-18!40;UBERON:0002780!4.71e-18!39;UBERON:0001890!4.71e-18!39;UBERON:0006240!4.71e-18!39;UBERON:0002791!3.19e-17!29;UBERON:0003528!3.19e-17!29;UBERON:0001893!3.19e-17!29;UBERON:0000956!2.86e-12!21;UBERON:0001869!2.86e-12!21;UBERON:0000203!2.86e-12!21;UBERON:0007811!1.02e-11!86;UBERON:0000153!5.23e-10!94;UBERON:0002619!9.06e-10!17;UBERON:0003076!2.72e-07!12;UBERON:0003057!2.72e-07!12;UBERON:0002021!4.16e-07!10;UBERON:0000411!4.16e-07!10;UBERON:0001950!4.16e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-38,73;UBERON:0001016,1.21e-37,75;UBERON:0004121,2.26e-34,95;UBERON:0000924,2.26e-34,95;UBERON:0006601,2.26e-34,95;UBERON:0002346,5.41e-34,64;UBERON:0003075,5.41e-34,64;UBERON:0007284,5.41e-34,64;UBERON:0000073,3.80e-30,54;UBERON:0001049,9.24e-29,52;UBERON:0005068,9.24e-29,52;UBERON:0006241,9.24e-29,52;UBERON:0007135,9.24e-29,52;UBERON:0010371,1.92e-28,73;UBERON:0000955,3.13e-24,47;UBERON:0006238,3.13e-24,47;UBERON:0002020,6.32e-24,34;UBERON:0003056,8.89e-24,49;UBERON:0002616,1.38e-23,46;UBERON:0010314,6.91e-22,92;UBERON:0003080,1.97e-20,40;UBERON:0002780,1.25e-19,39;UBERON:0001890,1.25e-19,39;UBERON:0006240,1.25e-19,39;UBERON:0003528,1.41e-19,29;UBERON:0002791,1.41e-19,29;UBERON:0001893,1.41e-19,29;UBERON:0000956,2.06e-13,21;UBERON:0001869,2.06e-13,21;UBERON:0000203,2.06e-13,21;UBERON:0002619,2.51e-10,17;UBERON:0003076,8.81e-09,12;UBERON:0003057,8.81e-09,12;UBERON:0002021,1.50e-08,10;UBERON:0000411,1.50e-08,10;UBERON:0001950,1.50e-08,10;UBERON:0002420,2.07e-07,8;UBERON:0007245,2.07e-07,8;UBERON:0010009,2.07e-07,8;UBERON:0010011,2.07e-07,8;UBERON:0000454,2.07e-07,8 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,5.27268398936633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,2.18025156380447,0.878744730937887,0.58328969722285,0.979904951377538,4.31257693094915,0,0,0,0.257259436035947,0,0,52.6022798234954,55.5440528235635,58.9463205260747,0,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,36.2913643079672,43.4719121428044,35.5449184683836,43.1332986449743,43.2902340265163,34.9098777762619,42.6512346031152,51.4762520501612,23.1243350098716,20.42997409363,19.5080297235429,55.6560134221418,51.599030991759,47.4031167206652,17.3093459380856,16.3201156909187,18.7941844765476,30.3467443037878,37.5861237309632,50.3278503728312,0.302904773332736,1.13357340160178,0,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0,1.69012103732017,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,2.77576522825817,2.43572382649713,2.7673859670727,2.26083960828934,2.23418543557839,0.251333182659351,0,0.289198713839823,0,0,0,0,0,28.3997373101201,32.2547928492721,0,0,0,0,34.4518470631092,29.7375391832107,60.1884346620621,25.0307021076878,31.708716708961,20.5710164113964,24.1739481970959,0.101839363850316,0,0,3.15662783829711,2.99277018814219,5.74755261083682,5.22180176435513,5.72678307775717,7.75616090325138,7.94305065766069,7.40243624021858,6.72628763921441,3.01795190105979,1.70195472151037,1.23165786914764,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.787056926989615,0.462801338662135,0.697601834251224,0.536546802799238,0.934122738937356,0.822799249567402,0.492502392237286,1.29710095273369,0.438599962275997,0.658650345873152,0.939444931322602,25.6553737248235,44.4547925478509,0,0.264450566663544,0.853153002140936,1.85789337488351,1.41754207454303,1.4117846723634,1.77902435075896,0.760902504450237,0,1.4822905925161,0.754005626400808,0.397912944082302,1.16978452271472,0,0,0.597423819763102,0.189667900953082,0.913988100877831,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0,0.502518772325447,0.238043640886014,0.195133647857799,0.630540576424764,0.221464689648775,0.637819074629948,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0,0,22.9587343682543,21.332526959781,0,0.252470927204373,5.67914794949262,7.41833614163613,10.7711698866399,6.21318874676635,4.23317480756549,4.24614796183249,3.23848561339915,4.38383786866968,5.92931666919785,17.3513510867776,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0.340439605753788,2.70091641046965,3.49268446213437,1.07168517515796,0.532020700926821,1.42695054081656,2.63278432963394,5.78483403317739,0,0,0.661585194164886,0,0,0.0603129249281559,0,0,0.291480836629851,23.1781627513137,0,0.412773735926445,0,0,0,0,0,0,0,0,0.949007980743406,1.42323626988794,0.972048067396211,0.627264888043406,0.655087691238533,0.809186078308924,0.661227645802687,0.785267825952089,0.388844919875379,0,0.56369293868419,0,0,0.388902376688095,0.516639293910924,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0.576060012515731,0,0.405450430580328,0,0,0.358053391334963,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0,0,0,38.9678771405776,32.6830917920096,34.9466263198032,28.1839219043648,32.1988784292202,27.1941803060292,30.3760125104313,30.1715206160228,23.1102628581944,20.192652158321,5.29315472679301,15.5619700626402,11.0976843740187,6.07766792670735,6.91723436672342,8.27295788025063,5.55616819504038,4.73880631649457,8.66481865897901,7.07552192938633,8.87177549615839,7.9223063382152,5.05664140337365,6.85069130732101,6.83482080571798,7.1444053692461,8.22778714208474,7.90927803901191,7.00546031365621,5.5935589651071,4.80016953339582,7.63145966485151,6.67621331852499,7.41266724824875,6.7758753899038,7.61531471025089,6.21955107767427,4.99832451731901,7.87663860305998,6.73370725989286,7.59264115994714,6.59980031916275,7.7753898202241,5.42278944150881,6.36591816237767,21.9833308585392,6.55008503647143,5.58664740525576,1.91288332068843,3.30887128679273,0.927471342481686 | |||
|short_description=p2@Apc2 | |||
}} |
Revision as of 19:40, 4 August 2015
Short description: | p2@Apc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Apc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000154212_5end |
EntrezGene: | 23805 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.10e-21 | 33 |
neuronal stem cell | 1.10e-21 | 33 |
neuroblast | 1.10e-21 | 33 |
electrically signaling cell | 1.10e-21 | 33 |
CNS neuron (sensu Vertebrata) | 1.65e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-19 | 23 |
ectodermal cell | 3.98e-19 | 44 |
neurectodermal cell | 3.98e-19 | 44 |
neural cell | 5.03e-19 | 43 |
electrically responsive cell | 3.38e-16 | 39 |
electrically active cell | 3.38e-16 | 39 |
embryonic cell | 7.24e-07 | 70 |