FFCP PHASE1:Mm9::chr12:16660375..16660389,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=491|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:16660375..16660389,+|id=chr12:16660375..16660389,+|ontology_enrichment_celltype=CL:0002319!1.85e-10!43;CL:0000221!4.43e-10!44;CL:0000133!4.43e-10!44;CL:0002453!1.34e-09!8;CL:0000055!3.86e-08!50;CL:0000333!2.38e-07!10;CL:0000095!2.38e-07!10;CL:0000243!2.38e-07!10;CL:0000123!2.38e-07!10;CL:0000125!2.38e-07!10;CL:0000030!2.38e-07!10;CL:0000339!2.38e-07!10;CL:0000117!3.87e-07!23;CL:0000337!3.87e-07!23;CL:0000128!4.23e-07!6;CL:0000126!4.23e-07!6;CL:0000127!4.23e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-12,23;CL:0000337,4.03e-12,23;CL:0002319,2.87e-11,43;CL:0000221,6.38e-11,44;CL:0000133,6.38e-11,44;CL:0002614,1.23e-08,3;CL:0002610,1.62e-08,3;CL:0000540,1.20e-07,33;CL:0000047,1.20e-07,33;CL:0000031,1.20e-07,33;CL:0000404,1.20e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.28e-30!73;UBERON:0005743!1.28e-30!73;UBERON:0000073!1.94e-29!75;UBERON:0001016!1.94e-29!75;UBERON:0001049!4.97e-23!52;UBERON:0005068!4.97e-23!52;UBERON:0006241!4.97e-23!52;UBERON:0007135!4.97e-23!52;UBERON:0000955!4.98e-23!50;UBERON:0006238!4.98e-23!50;UBERON:0002616!5.98e-22!49;UBERON:0004121!4.14e-20!102;UBERON:0000924!4.14e-20!102;UBERON:0006601!4.14e-20!102;UBERON:0000033!1.73e-18!63;UBERON:0002020!3.13e-17!34;UBERON:0002346!3.61e-16!71;UBERON:0003075!3.61e-16!71;UBERON:0007284!3.61e-16!71;UBERON:0002791!9.06e-14!29;UBERON:0003528!9.06e-14!29;UBERON:0001893!9.06e-14!29;UBERON:0002021!2.62e-13!10;UBERON:0000411!2.62e-13!10;UBERON:0001950!2.62e-13!10;UBERON:0003076!7.33e-13!12;UBERON:0003057!7.33e-13!12;UBERON:0003080!1.66e-12!40;UBERON:0002780!1.73e-11!39;UBERON:0001890!1.73e-11!39;UBERON:0006240!1.73e-11!39;UBERON:0002619!1.76e-11!17;UBERON:0003056!6.90e-11!49;UBERON:0007811!7.66e-11!86;UBERON:0000956!2.77e-10!21;UBERON:0001869!2.77e-10!21;UBERON:0000203!2.77e-10!21;UBERON:0000025!3.38e-10!114;UBERON:0002298!4.23e-10!6;UBERON:0000153!4.15e-09!94;UBERON:0004111!8.28e-09!122;UBERON:0004733!2.35e-08!6;UBERON:0004732!2.35e-08!6;UBERON:0002028!2.35e-08!6;UBERON:0007277!2.35e-08!6;UBERON:0002950!2.02e-07!4;UBERON:0001891!2.02e-07!4;UBERON:0009616!2.02e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-40,73;UBERON:0001016,5.01e-39,75;UBERON:0000073,8.65e-35,54;UBERON:0001049,8.39e-31,52;UBERON:0005068,8.39e-31,52;UBERON:0006241,8.39e-31,52;UBERON:0007135,8.39e-31,52;UBERON:0004121,3.84e-29,95;UBERON:0000924,3.84e-29,95;UBERON:0006601,3.84e-29,95;UBERON:0000955,6.06e-25,47;UBERON:0006238,6.06e-25,47;UBERON:0002346,9.80e-24,64;UBERON:0003075,9.80e-24,64;UBERON:0007284,9.80e-24,64;UBERON:0002616,2.02e-23,46;UBERON:0002020,3.66e-22,34;UBERON:0002021,3.64e-20,10;UBERON:0000411,3.64e-20,10;UBERON:0001950,3.64e-20,10;UBERON:0010371,5.83e-20,73;UBERON:0003528,9.60e-17,29;UBERON:0002791,9.60e-17,29;UBERON:0001893,9.60e-17,29;UBERON:0003080,1.17e-16,40;UBERON:0003076,1.43e-16,12;UBERON:0003057,1.43e-16,12;UBERON:0002780,3.94e-15,39;UBERON:0001890,3.94e-15,39;UBERON:0006240,3.94e-15,39;UBERON:0010314,2.01e-14,92;UBERON:0002619,1.64e-13,17;UBERON:0003056,9.67e-13,49;UBERON:0000956,1.08e-12,21;UBERON:0001869,1.08e-12,21;UBERON:0000203,1.08e-12,21;UBERON:0002950,7.59e-11,4;UBERON:0001891,7.59e-11,4;UBERON:0009616,7.59e-11,4;UBERON:0010286,7.59e-11,4;UBERON:0000025,2.49e-10,114;UBERON:0011216,4.10e-10,194;UBERON:0004111,3.26e-09,122;UBERON:0002240,4.55e-09,6;UBERON:0005174,4.55e-09,6;UBERON:0001137,4.55e-09,6;UBERON:0004733,5.14e-09,6;UBERON:0004732,5.14e-09,6;UBERON:0002028,5.14e-09,6;UBERON:0007277,5.14e-09,6;UBERON:0002038,1.23e-08,3;UBERON:0009663,1.23e-08,3;UBERON:0009661,1.23e-08,3;UBERON:0000125,1.23e-08,3;UBERON:0002308,1.23e-08,3;UBERON:0004684,1.62e-08,3;UBERON:0002275,1.62e-08,3;UBERON:0001948,4.67e-07,5;UBERON:0002315,4.67e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.79655344036982,0.219686182734472,0.388859798148567,3.21968769738334,1.43752564364972,0,0,0,0,0,0,0,1.05798195854407,1.26766280701236,0,0,0,0,0,11.085204089181,28.432154593795,0,0,0,16.2821061110168,13.2521124570968,0,0,0,47.3498288297371,33.1987079021488,34.1006503828861,0,0,0,43.273364845214,51.7741601229146,40.4915356608547,5.59794312399969,4.55589378557129,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,10.2473278954042,9.21565509979202,0,0,0,0,25.9137806170343,21.5025283324754,0.251308704225729,15.9918374576894,11.5071955798649,24.7267773025876,20.4423991465375,0,0,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.877199924551994,0,0.536825675041487,14.5100064509248,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=491 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:16660375..16660389,+ | |||
|description=CAGE_peak_at_chr12:16660375..16660389,+ | |||
|id=chr12:16660375..16660389,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.85e-10!43;CL:0000221!4.43e-10!44;CL:0000133!4.43e-10!44;CL:0002453!1.34e-09!8;CL:0000055!3.86e-08!50;CL:0000333!2.38e-07!10;CL:0000095!2.38e-07!10;CL:0000243!2.38e-07!10;CL:0000123!2.38e-07!10;CL:0000125!2.38e-07!10;CL:0000030!2.38e-07!10;CL:0000339!2.38e-07!10;CL:0000117!3.87e-07!23;CL:0000337!3.87e-07!23;CL:0000128!4.23e-07!6;CL:0000126!4.23e-07!6;CL:0000127!4.23e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-12,23;CL:0000337,4.03e-12,23;CL:0002319,2.87e-11,43;CL:0000221,6.38e-11,44;CL:0000133,6.38e-11,44;CL:0002614,1.23e-08,3;CL:0002610,1.62e-08,3;CL:0000540,1.20e-07,33;CL:0000047,1.20e-07,33;CL:0000031,1.20e-07,33;CL:0000404,1.20e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.28e-30!73;UBERON:0005743!1.28e-30!73;UBERON:0000073!1.94e-29!75;UBERON:0001016!1.94e-29!75;UBERON:0001049!4.97e-23!52;UBERON:0005068!4.97e-23!52;UBERON:0006241!4.97e-23!52;UBERON:0007135!4.97e-23!52;UBERON:0000955!4.98e-23!50;UBERON:0006238!4.98e-23!50;UBERON:0002616!5.98e-22!49;UBERON:0004121!4.14e-20!102;UBERON:0000924!4.14e-20!102;UBERON:0006601!4.14e-20!102;UBERON:0000033!1.73e-18!63;UBERON:0002020!3.13e-17!34;UBERON:0002346!3.61e-16!71;UBERON:0003075!3.61e-16!71;UBERON:0007284!3.61e-16!71;UBERON:0002791!9.06e-14!29;UBERON:0003528!9.06e-14!29;UBERON:0001893!9.06e-14!29;UBERON:0002021!2.62e-13!10;UBERON:0000411!2.62e-13!10;UBERON:0001950!2.62e-13!10;UBERON:0003076!7.33e-13!12;UBERON:0003057!7.33e-13!12;UBERON:0003080!1.66e-12!40;UBERON:0002780!1.73e-11!39;UBERON:0001890!1.73e-11!39;UBERON:0006240!1.73e-11!39;UBERON:0002619!1.76e-11!17;UBERON:0003056!6.90e-11!49;UBERON:0007811!7.66e-11!86;UBERON:0000956!2.77e-10!21;UBERON:0001869!2.77e-10!21;UBERON:0000203!2.77e-10!21;UBERON:0000025!3.38e-10!114;UBERON:0002298!4.23e-10!6;UBERON:0000153!4.15e-09!94;UBERON:0004111!8.28e-09!122;UBERON:0004733!2.35e-08!6;UBERON:0004732!2.35e-08!6;UBERON:0002028!2.35e-08!6;UBERON:0007277!2.35e-08!6;UBERON:0002950!2.02e-07!4;UBERON:0001891!2.02e-07!4;UBERON:0009616!2.02e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-40,73;UBERON:0001016,5.01e-39,75;UBERON:0000073,8.65e-35,54;UBERON:0001049,8.39e-31,52;UBERON:0005068,8.39e-31,52;UBERON:0006241,8.39e-31,52;UBERON:0007135,8.39e-31,52;UBERON:0004121,3.84e-29,95;UBERON:0000924,3.84e-29,95;UBERON:0006601,3.84e-29,95;UBERON:0000955,6.06e-25,47;UBERON:0006238,6.06e-25,47;UBERON:0002346,9.80e-24,64;UBERON:0003075,9.80e-24,64;UBERON:0007284,9.80e-24,64;UBERON:0002616,2.02e-23,46;UBERON:0002020,3.66e-22,34;UBERON:0002021,3.64e-20,10;UBERON:0000411,3.64e-20,10;UBERON:0001950,3.64e-20,10;UBERON:0010371,5.83e-20,73;UBERON:0003528,9.60e-17,29;UBERON:0002791,9.60e-17,29;UBERON:0001893,9.60e-17,29;UBERON:0003080,1.17e-16,40;UBERON:0003076,1.43e-16,12;UBERON:0003057,1.43e-16,12;UBERON:0002780,3.94e-15,39;UBERON:0001890,3.94e-15,39;UBERON:0006240,3.94e-15,39;UBERON:0010314,2.01e-14,92;UBERON:0002619,1.64e-13,17;UBERON:0003056,9.67e-13,49;UBERON:0000956,1.08e-12,21;UBERON:0001869,1.08e-12,21;UBERON:0000203,1.08e-12,21;UBERON:0002950,7.59e-11,4;UBERON:0001891,7.59e-11,4;UBERON:0009616,7.59e-11,4;UBERON:0010286,7.59e-11,4;UBERON:0000025,2.49e-10,114;UBERON:0011216,4.10e-10,194;UBERON:0004111,3.26e-09,122;UBERON:0002240,4.55e-09,6;UBERON:0005174,4.55e-09,6;UBERON:0001137,4.55e-09,6;UBERON:0004733,5.14e-09,6;UBERON:0004732,5.14e-09,6;UBERON:0002028,5.14e-09,6;UBERON:0007277,5.14e-09,6;UBERON:0002038,1.23e-08,3;UBERON:0009663,1.23e-08,3;UBERON:0009661,1.23e-08,3;UBERON:0000125,1.23e-08,3;UBERON:0002308,1.23e-08,3;UBERON:0004684,1.62e-08,3;UBERON:0002275,1.62e-08,3;UBERON:0001948,4.67e-07,5;UBERON:0002315,4.67e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.79655344036982,0.219686182734472,0.388859798148567,3.21968769738334,1.43752564364972,0,0,0,0,0,0,0,1.05798195854407,1.26766280701236,0,0,0,0,0,11.085204089181,28.432154593795,0,0,0,16.2821061110168,13.2521124570968,0,0,0,47.3498288297371,33.1987079021488,34.1006503828861,0,0,0,43.273364845214,51.7741601229146,40.4915356608547,5.59794312399969,4.55589378557129,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,10.2473278954042,9.21565509979202,0,0,0,0,25.9137806170343,21.5025283324754,0.251308704225729,15.9918374576894,11.5071955798649,24.7267773025876,20.4423991465375,0,0,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.877199924551994,0,0.536825675041487,14.5100064509248,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0,0,0,0,0,0,23.922037908181,19.6915633474901,0,0,0,0,0,0,0.222798674082394,0.566153061577665,0,0,0,11.2462460747632,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1781627513137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,9.66682996665071,11.4579102687879,12.2015759464018,15.0718154349541,18.1294535373528,9.45031500324528,13.0593148935024,12.6879874515577,12.9440077937955,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr12:16660375..16660389,+ | |||
}} |
Latest revision as of 21:17, 4 August 2015
Short description: | p@chr12:16660375..16660389, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:16660375..16660389, + |
Coexpression cluster: | MCL_coexpression_mm9:491 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.03e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-12 | 23 |
neural cell | 2.87e-11 | 43 |
ectodermal cell | 6.38e-11 | 44 |
neurectodermal cell | 6.38e-11 | 44 |
neuron of the substantia nigra | 1.23e-08 | 3 |
raphe nuclei neuron | 1.62e-08 | 3 |
neuron | 1.20e-07 | 33 |
neuronal stem cell | 1.20e-07 | 33 |
neuroblast | 1.20e-07 | 33 |
electrically signaling cell | 1.20e-07 | 33 |