FFCP PHASE1:Mm9::chr17:43938737..43938766,+: Difference between revisions
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{{FFCP|EntrezGene=53901|HGNC=|MCL_coexpression_id=405|UniProt=Q8VIP4,Q9JHG2,Q543P2|association_with_transcript=-33bp_to_ENSMUST00000044895,NM_207649,uc008cpo.1_5end|description=CAGE_peak_4_at_Rcan2_5end|id=chr17:43938737..43938766,+|ontology_enrichment_celltype=CL:0000117!1.80e-09!23;CL:0000337!1.80e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-12,23;CL:0000337,7.31e-12,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.04e-18!73;UBERON:0005743!1.04e-18!73;UBERON:0000073!6.87e-18!75;UBERON:0001016!6.87e-18!75;UBERON:0001049!3.06e-17!52;UBERON:0005068!3.06e-17!52;UBERON:0006241!3.06e-17!52;UBERON:0007135!3.06e-17!52;UBERON:0002346!1.01e-16!71;UBERON:0003075!1.01e-16!71;UBERON:0007284!1.01e-16!71;UBERON:0000955!1.20e-16!50;UBERON:0006238!1.20e-16!50;UBERON:0000033!1.85e-16!63;UBERON:0002616!4.03e-16!49;UBERON:0002020!3.81e-15!34;UBERON:0004121!5.11e-15!102;UBERON:0000924!5.11e-15!102;UBERON:0006601!5.11e-15!102;UBERON:0003056!2.54e-14!49;UBERON:0000025!3.10e-14!114;UBERON:0003080!2.90e-13!40;UBERON:0004111!8.69e-13!122;UBERON:0002791!1.07e-12!29;UBERON:0003528!1.07e-12!29;UBERON:0001893!1.07e-12!29;UBERON:0002780!1.21e-12!39;UBERON:0001890!1.21e-12!39;UBERON:0006240!1.21e-12!39;UBERON:0002619!1.69e-09!17;UBERON:0000956!2.45e-08!21;UBERON:0001869!2.45e-08!21;UBERON:0000203!2.45e-08!21;UBERON:0002021!4.90e-08!10;UBERON:0000411!4.90e-08!10;UBERON:0001950!4.90e-08!10;UBERON:0003103!6.64e-08!43;UBERON:0000468!1.50e-07!333;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.06e-25,92;UBERON:0000073,2.99e-24,54;UBERON:0001049,2.55e-22,52;UBERON:0005068,2.55e-22,52;UBERON:0006241,2.55e-22,52;UBERON:0007135,2.55e-22,52;UBERON:0001017,1.26e-20,73;UBERON:0002020,1.46e-19,34;UBERON:0001016,1.55e-19,75;UBERON:0002346,1.60e-19,64;UBERON:0003075,1.60e-19,64;UBERON:0007284,1.60e-19,64;UBERON:0000955,5.20e-19,47;UBERON:0006238,5.20e-19,47;UBERON:0002616,2.55e-18,46;UBERON:0003080,1.84e-16,40;UBERON:0003528,3.13e-16,29;UBERON:0002791,3.13e-16,29;UBERON:0001893,3.13e-16,29;UBERON:0004121,1.19e-15,95;UBERON:0000924,1.19e-15,95;UBERON:0006601,1.19e-15,95;UBERON:0002780,1.25e-15,39;UBERON:0001890,1.25e-15,39;UBERON:0006240,1.25e-15,39;UBERON:0003056,1.43e-15,49;UBERON:0010371,6.76e-15,73;UBERON:0000025,1.56e-14,114;UBERON:0004111,2.32e-13,122;UBERON:0002619,2.16e-12,17;UBERON:0002021,2.12e-10,10;UBERON:0000411,2.12e-10,10;UBERON:0001950,2.12e-10,10;UBERON:0000956,2.46e-10,21;UBERON:0001869,2.46e-10,21;UBERON:0000203,2.46e-10,21;UBERON:0007100,7.42e-10,18;UBERON:0000948,7.42e-10,18;UBERON:0005498,7.42e-10,18;UBERON:0004140,7.42e-10,18;UBERON:0009881,7.42e-10,18;UBERON:0004141,7.42e-10,18;UBERON:0003084,7.42e-10,18;UBERON:0007005,7.42e-10,18;UBERON:0004139,7.42e-10,18;UBERON:0004291,7.42e-10,18;UBERON:0003103,2.24e-08,43;UBERON:0004535,2.97e-08,23;UBERON:0001009,2.97e-08,23;UBERON:0002420,2.17e-07,8;UBERON:0007245,2.17e-07,8;UBERON:0010009,2.17e-07,8;UBERON:0010011,2.17e-07,8;UBERON:0000454,2.17e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,4.14247797122848,1.97717564461025,4.27745777963423,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,1.54701627683233,7.28339259094552,11.1088105647127,9.50747105259269,0,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0.311068836925433,0.135005938331691,0.420649922702764,5.14171771926846,3.53389665522582,1.46988959057945,1.72521847832825,1.83843757322004,9.91042928994498,10.3426743849002,8.1411462625809,12.5291973343684,11.0700048758916,9.89735404057844,4.18774498502071,4.50210088025344,7.94550888439413,5.30331453852602,6.83384067835694,7.26957838718672,0.151452386666368,0.302286240427142,1.15945795480671,0,0,0,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0,0.890652834388949,0.173485326766136,1.21786191324856,0.691846491768175,0.301445281105245,0.940709657085638,0.251333182659351,0,2.89198713839823,0.884610551949874,0.970601099684455,0.441683036920787,0,0,2.63502717310392,1.25668024088073,0.255457055208591,0,0,0,10.7849260371472,11.4375150704657,3.01570445070875,9.73416193076748,10.2286182932132,8.10373373782284,7.62533936418461,2.03678727700633,0.995255764880744,0.505445516867349,1.47309299120532,0.780722657776222,0.689706313300419,0.720248519221397,0.753524089178575,1.42876648217788,1.66547836370305,1.59292931751539,2.32833033665114,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,3.10688658803253,4.69052119962192,5.04173772090842,7.8125762743119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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53901 | |||
|HGNC= | |||
|MCL_coexpression_id=405 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VIP4,uniprot:Q9JHG2,uniprot:Q543P2 | |||
|association_with_transcript=-33bp_to_ENSMUST00000044895,NM_207649,uc008cpo.1_5end | |||
|cluster_id=chr17:43938737..43938766,+ | |||
|description=CAGE_peak_4_at_Rcan2_5end | |||
|id=chr17:43938737..43938766,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.80e-09!23;CL:0000337!1.80e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-12,23;CL:0000337,7.31e-12,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.04e-18!73;UBERON:0005743!1.04e-18!73;UBERON:0000073!6.87e-18!75;UBERON:0001016!6.87e-18!75;UBERON:0001049!3.06e-17!52;UBERON:0005068!3.06e-17!52;UBERON:0006241!3.06e-17!52;UBERON:0007135!3.06e-17!52;UBERON:0002346!1.01e-16!71;UBERON:0003075!1.01e-16!71;UBERON:0007284!1.01e-16!71;UBERON:0000955!1.20e-16!50;UBERON:0006238!1.20e-16!50;UBERON:0000033!1.85e-16!63;UBERON:0002616!4.03e-16!49;UBERON:0002020!3.81e-15!34;UBERON:0004121!5.11e-15!102;UBERON:0000924!5.11e-15!102;UBERON:0006601!5.11e-15!102;UBERON:0003056!2.54e-14!49;UBERON:0000025!3.10e-14!114;UBERON:0003080!2.90e-13!40;UBERON:0004111!8.69e-13!122;UBERON:0002791!1.07e-12!29;UBERON:0003528!1.07e-12!29;UBERON:0001893!1.07e-12!29;UBERON:0002780!1.21e-12!39;UBERON:0001890!1.21e-12!39;UBERON:0006240!1.21e-12!39;UBERON:0002619!1.69e-09!17;UBERON:0000956!2.45e-08!21;UBERON:0001869!2.45e-08!21;UBERON:0000203!2.45e-08!21;UBERON:0002021!4.90e-08!10;UBERON:0000411!4.90e-08!10;UBERON:0001950!4.90e-08!10;UBERON:0003103!6.64e-08!43;UBERON:0000468!1.50e-07!333;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.06e-25,92;UBERON:0000073,2.99e-24,54;UBERON:0001049,2.55e-22,52;UBERON:0005068,2.55e-22,52;UBERON:0006241,2.55e-22,52;UBERON:0007135,2.55e-22,52;UBERON:0001017,1.26e-20,73;UBERON:0002020,1.46e-19,34;UBERON:0001016,1.55e-19,75;UBERON:0002346,1.60e-19,64;UBERON:0003075,1.60e-19,64;UBERON:0007284,1.60e-19,64;UBERON:0000955,5.20e-19,47;UBERON:0006238,5.20e-19,47;UBERON:0002616,2.55e-18,46;UBERON:0003080,1.84e-16,40;UBERON:0003528,3.13e-16,29;UBERON:0002791,3.13e-16,29;UBERON:0001893,3.13e-16,29;UBERON:0004121,1.19e-15,95;UBERON:0000924,1.19e-15,95;UBERON:0006601,1.19e-15,95;UBERON:0002780,1.25e-15,39;UBERON:0001890,1.25e-15,39;UBERON:0006240,1.25e-15,39;UBERON:0003056,1.43e-15,49;UBERON:0010371,6.76e-15,73;UBERON:0000025,1.56e-14,114;UBERON:0004111,2.32e-13,122;UBERON:0002619,2.16e-12,17;UBERON:0002021,2.12e-10,10;UBERON:0000411,2.12e-10,10;UBERON:0001950,2.12e-10,10;UBERON:0000956,2.46e-10,21;UBERON:0001869,2.46e-10,21;UBERON:0000203,2.46e-10,21;UBERON:0007100,7.42e-10,18;UBERON:0000948,7.42e-10,18;UBERON:0005498,7.42e-10,18;UBERON:0004140,7.42e-10,18;UBERON:0009881,7.42e-10,18;UBERON:0004141,7.42e-10,18;UBERON:0003084,7.42e-10,18;UBERON:0007005,7.42e-10,18;UBERON:0004139,7.42e-10,18;UBERON:0004291,7.42e-10,18;UBERON:0003103,2.24e-08,43;UBERON:0004535,2.97e-08,23;UBERON:0001009,2.97e-08,23;UBERON:0002420,2.17e-07,8;UBERON:0007245,2.17e-07,8;UBERON:0010009,2.17e-07,8;UBERON:0010011,2.17e-07,8;UBERON:0000454,2.17e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,4.14247797122848,1.97717564461025,4.27745777963423,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,1.54701627683233,7.28339259094552,11.1088105647127,9.50747105259269,0,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0.311068836925433,0.135005938331691,0.420649922702764,5.14171771926846,3.53389665522582,1.46988959057945,1.72521847832825,1.83843757322004,9.91042928994498,10.3426743849002,8.1411462625809,12.5291973343684,11.0700048758916,9.89735404057844,4.18774498502071,4.50210088025344,7.94550888439413,5.30331453852602,6.83384067835694,7.26957838718672,0.151452386666368,0.302286240427142,1.15945795480671,0,0,0,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0,0.890652834388949,0.173485326766136,1.21786191324856,0.691846491768175,0.301445281105245,0.940709657085638,0.251333182659351,0,2.89198713839823,0.884610551949874,0.970601099684455,0.441683036920787,0,0,2.63502717310392,1.25668024088073,0.255457055208591,0,0,0,10.7849260371472,11.4375150704657,3.01570445070875,9.73416193076748,10.2286182932132,8.10373373782284,7.62533936418461,2.03678727700633,0.995255764880744,0.505445516867349,1.47309299120532,0.780722657776222,0.689706313300419,0.720248519221397,0.753524089178575,1.42876648217788,1.66547836370305,1.59292931751539,2.32833033665114,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,3.10688658803253,4.69052119962192,5.04173772090842,7.81257627431194,6.29645541591692,6.78775296704464,7.44108623201305,8.31647544338819,9.10769670463922,7.5697530960201,7.38753588355929,5.91802309684747,6.28659945928929,9.00155472693308,5.90508242545636,1.68231958851302,1.23485534855141,0,0.264450566663544,0.426576501070468,0.928946687441754,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.658795818896044,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0,0.379335801906163,0.456994050438915,1.1270773567308,1.4255592949172,1.35766741017338,0.771494018793504,1.96033265085198,0.442830443938806,0.627994911365499,0.493588655687202,0.296452627087149,0.667380422864376,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0.863088412352432,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0,0.369506380333209,0.568474235311454,1.14075483509418,0.848725428875941,0.469380496577004,0.502518772325447,0.476087281772027,0.390267295715598,0.788175720530955,0.664394068946325,0.956728611944923,0.983179888294428,0.518054945597687,0,0,0,0,0,5.13761887960934,5.62616095642575,0,0.757412781613119,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,6.74774764485795,0.709700426041343,0.890328018336276,1.46598263418218,1.48473110675282,1.32745138339963,1.69946445308487,2.72091201268276,1.13163047853539,0.590603785761546,1.22974059177571,0.516856586336442,1.45413491791002,0.712994756769443,0,0,1.03135543248187,0.680879211507576,1.08036656418786,0.258717367565509,0.428674070063185,1.24138163549592,3.21063871683727,1.64549020602121,0,0.469343416127421,0,0,0.49465875882444,0.645857706783622,0.784068024066026,0.238744688006273,0,0.291480836629851,4.63563255026274,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.813277868507395,0.432021363287205,1.67270636811575,1.52853794622324,1.88810084938749,2.56225712748541,1.04702376793612,0.388844919875379,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0.5208175393758,0.209718688851422,0,0.576060012515731,0.316011120628178,0.202725215290164,0,0.51968329191118,0,0.198681354781265,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0,2.72076460338254,0,0,0,1.15913756419314,0.563047426353546,0.36630324853453,0,0.501572104035363,12.4245405375755,9.66682996665071,8.59343270159095,7.56154002312225,13.0165678756422,16.6186657425734,10.8003600037089,13.9599572999508,11.3285602246051,14.497288729051,1.24544817101012,0.798049746802062,0.512200817262403,1.21553358534147,1.67690530102386,1.83843508450014,1.55572709461131,2.67845574410562,0.320919209591815,1.51618327058278,1.2673964994512,0.754505365544305,1.03005658216871,0.960377286073039,1.55075766180156,0.476293691283074,1.97003354106254,1.15745532278223,1.64834360321323,1.61918812147837,0.685738504770831,0.70990322463735,0.953744759789284,2.32554266611726,2.63506265162926,1.18460451048347,1.82927972872773,1.05227884575137,1.49384525230448,1.12228454331548,1.77952527186261,1.67457620038458,1.63692417267876,1.39443157067369,0.964533054905707,3.2475375131933,1.40358965067245,1.50409737833809,2.86932498103265,1.54413993383661,0.463735671240843 | |||
|short_description=p4@Rcan2 | |||
}} |
Revision as of 22:17, 4 August 2015
Short description: | p4@Rcan2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rcan2_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | -33bp_to_ENSMUST00000044895, NM_207649, uc008cpo.1_5end |
EntrezGene: | 53901 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.31e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.31e-12 | 23 |