FFCP PHASE1:Mm9::chr15:103333594..103333648,+: Difference between revisions
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{{FFCP|EntrezGene=18574|HGNC=|MCL_coexpression_id=2959|UniProt=Q01065|association_with_transcript=-80bp_to_ENSMUST00000023132,NM_008800,uc007xyh.1_5end|description=CAGE_peak_2_at_Pde1b_5end|id=chr15:103333594..103333648,+|ontology_enrichment_celltype=CL:0000117!3.32e-15!23;CL:0000337!3.32e-15!23;CL:0000540!3.73e-13!33;CL:0000047!3.73e-13!33;CL:0000031!3.73e-13!33;CL:0000404!3.73e-13!33;CL:0002319!1.51e-12!43;CL:0000221!2.60e-12!44;CL:0000133!2.60e-12!44;CL:0000055!3.84e-08!50;CL:0000393!5.11e-08!39;CL:0000211!5.11e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.52e-18,23;CL:0000337,2.52e-18,23;CL:0000540,1.31e-15,33;CL:0000047,1.31e-15,33;CL:0000031,1.31e-15,33;CL:0000404,1.31e-15,33;CL:0002319,1.84e-14,43;CL:0000221,8.65e-14,44;CL:0000133,8.65e-14,44;CL:0000393,3.41e-11,39;CL:0000211,3.41e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.22e-28!73;UBERON:0005743!1.22e-28!73;UBERON:0002346!2.03e-28!71;UBERON:0003075!2.03e-28!71;UBERON:0007284!2.03e-28!71;UBERON:0000073!4.71e-28!75;UBERON:0001016!4.71e-28!75;UBERON:0004121!4.69e-26!102;UBERON:0000924!4.69e-26!102;UBERON:0006601!4.69e-26!102;UBERON:0000033!6.07e-25!63;UBERON:0001049!4.93e-24!52;UBERON:0005068!4.93e-24!52;UBERON:0006241!4.93e-24!52;UBERON:0007135!4.93e-24!52;UBERON:0003056!4.31e-23!49;UBERON:0000955!1.59e-22!50;UBERON:0006238!1.59e-22!50;UBERON:0002616!7.82e-22!49;UBERON:0003080!1.28e-18!40;UBERON:0002020!2.21e-18!34;UBERON:0002780!6.68e-18!39;UBERON:0001890!6.68e-18!39;UBERON:0006240!6.68e-18!39;UBERON:0002791!6.70e-15!29;UBERON:0003528!6.70e-15!29;UBERON:0001893!6.70e-15!29;UBERON:0007811!4.62e-12!86;UBERON:0000153!7.76e-12!94;UBERON:0000956!4.77e-10!21;UBERON:0001869!4.77e-10!21;UBERON:0000203!4.77e-10!21;UBERON:0002619!9.52e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.99e-36,64;UBERON:0003075,2.99e-36,64;UBERON:0007284,2.99e-36,64;UBERON:0001017,3.39e-34,73;UBERON:0001016,2.12e-33,75;UBERON:0004121,4.13e-31,95;UBERON:0000924,4.13e-31,95;UBERON:0006601,4.13e-31,95;UBERON:0000073,6.34e-31,54;UBERON:0010371,1.71e-29,73;UBERON:0001049,4.26e-29,52;UBERON:0005068,4.26e-29,52;UBERON:0006241,4.26e-29,52;UBERON:0007135,4.26e-29,52;UBERON:0003056,1.84e-27,49;UBERON:0000955,1.09e-24,47;UBERON:0006238,1.09e-24,47;UBERON:0002616,7.38e-24,46;UBERON:0003080,5.67e-22,40;UBERON:0002020,1.21e-21,34;UBERON:0002780,4.27e-21,39;UBERON:0001890,4.27e-21,39;UBERON:0006240,4.27e-21,39;UBERON:0010314,4.98e-19,92;UBERON:0003528,2.19e-17,29;UBERON:0002791,2.19e-17,29;UBERON:0001893,2.19e-17,29;UBERON:0000956,1.82e-11,21;UBERON:0001869,1.82e-11,21;UBERON:0000203,1.82e-11,21;UBERON:0002619,1.13e-08,17;UBERON:0003076,1.59e-07,12;UBERON:0003057,1.59e-07,12;UBERON:0002420,2.71e-07,8;UBERON:0007245,2.71e-07,8;UBERON:0010009,2.71e-07,8;UBERON:0010011,2.71e-07,8;UBERON:0000454,2.71e-07,8|phase1_expression=4.16387002472464,0,0.454999239389536,0,0,0.671517087647559,1.16806320297763,0.129123323441576,0.140788722151667,0,0.171217968225505,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0.137114433605739,0,4.84746753861098,0.198581902401771,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.816677425049476,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,3.2703773457067,1.97717564461025,0.58328969722285,0.419959264876088,4.31257693094915,0,0,0,0,0,0,20.8385954685386,26.9785399428737,7.60597684207415,0.338844532069132,0.889294796111139,0,0,0,4.79360176829448,7.30014780110954,26.0260926894279,23.6260392080459,26.2906201689228,36.8489769880907,26.7250934551452,11.8816075238505,12.3640657613525,13.7882817991503,26.4278114398533,28.2189017168265,25.3450779872802,19.3872842963385,20.6762074541446,12.5019208933622,29.5933978941464,24.7615548413939,22.1557459276375,28.5789727909458,29.4709379254143,27.7735174279698,0.227178579999552,1.43585964202892,0.289864488701678,0.860423876981386,0,0,0,0,1.54488862144927,0,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.79928715803342,0.776813650941515,2.22663208597237,0.520455980298408,0.913396434936424,1.15307748628029,0.301445281105245,0.705532242814229,0.879666139307728,0,0.289198713839823,0,0.647067399789637,0.220841518460394,0,0,4.68449275218475,5.44561437714983,1.02182822083437,0,0,0,29.6585466021549,76.4026006707106,25.1308704225729,13.3844726548053,15.5986428971502,30.7526305948149,36.9910079794487,0.305518091550949,0,0.252722758433675,4.20883711772948,4.29397461776922,6.20735681970377,8.82304436046211,10.3986324306643,11.9063873514824,12.811372028485,11.7127155699661,7.50239775143145,0.215567992932842,0.945530400839096,1.05570674498369,0.876782929710299,1.11218899690239,0.696504333044333,1.02891068203972,0.995171334092466,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0.268273401399619,0,0.329119699826961,0.16416746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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18574 | |||
|HGNC= | |||
|MCL_coexpression_id=2959 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q01065 | |||
|association_with_transcript=-80bp_to_ENSMUST00000023132,NM_008800,uc007xyh.1_5end | |||
|cluster_id=chr15:103333594..103333648,+ | |||
|description=CAGE_peak_2_at_Pde1b_5end | |||
|id=chr15:103333594..103333648,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.32e-15!23;CL:0000337!3.32e-15!23;CL:0000540!3.73e-13!33;CL:0000047!3.73e-13!33;CL:0000031!3.73e-13!33;CL:0000404!3.73e-13!33;CL:0002319!1.51e-12!43;CL:0000221!2.60e-12!44;CL:0000133!2.60e-12!44;CL:0000055!3.84e-08!50;CL:0000393!5.11e-08!39;CL:0000211!5.11e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.52e-18,23;CL:0000337,2.52e-18,23;CL:0000540,1.31e-15,33;CL:0000047,1.31e-15,33;CL:0000031,1.31e-15,33;CL:0000404,1.31e-15,33;CL:0002319,1.84e-14,43;CL:0000221,8.65e-14,44;CL:0000133,8.65e-14,44;CL:0000393,3.41e-11,39;CL:0000211,3.41e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.22e-28!73;UBERON:0005743!1.22e-28!73;UBERON:0002346!2.03e-28!71;UBERON:0003075!2.03e-28!71;UBERON:0007284!2.03e-28!71;UBERON:0000073!4.71e-28!75;UBERON:0001016!4.71e-28!75;UBERON:0004121!4.69e-26!102;UBERON:0000924!4.69e-26!102;UBERON:0006601!4.69e-26!102;UBERON:0000033!6.07e-25!63;UBERON:0001049!4.93e-24!52;UBERON:0005068!4.93e-24!52;UBERON:0006241!4.93e-24!52;UBERON:0007135!4.93e-24!52;UBERON:0003056!4.31e-23!49;UBERON:0000955!1.59e-22!50;UBERON:0006238!1.59e-22!50;UBERON:0002616!7.82e-22!49;UBERON:0003080!1.28e-18!40;UBERON:0002020!2.21e-18!34;UBERON:0002780!6.68e-18!39;UBERON:0001890!6.68e-18!39;UBERON:0006240!6.68e-18!39;UBERON:0002791!6.70e-15!29;UBERON:0003528!6.70e-15!29;UBERON:0001893!6.70e-15!29;UBERON:0007811!4.62e-12!86;UBERON:0000153!7.76e-12!94;UBERON:0000956!4.77e-10!21;UBERON:0001869!4.77e-10!21;UBERON:0000203!4.77e-10!21;UBERON:0002619!9.52e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.99e-36,64;UBERON:0003075,2.99e-36,64;UBERON:0007284,2.99e-36,64;UBERON:0001017,3.39e-34,73;UBERON:0001016,2.12e-33,75;UBERON:0004121,4.13e-31,95;UBERON:0000924,4.13e-31,95;UBERON:0006601,4.13e-31,95;UBERON:0000073,6.34e-31,54;UBERON:0010371,1.71e-29,73;UBERON:0001049,4.26e-29,52;UBERON:0005068,4.26e-29,52;UBERON:0006241,4.26e-29,52;UBERON:0007135,4.26e-29,52;UBERON:0003056,1.84e-27,49;UBERON:0000955,1.09e-24,47;UBERON:0006238,1.09e-24,47;UBERON:0002616,7.38e-24,46;UBERON:0003080,5.67e-22,40;UBERON:0002020,1.21e-21,34;UBERON:0002780,4.27e-21,39;UBERON:0001890,4.27e-21,39;UBERON:0006240,4.27e-21,39;UBERON:0010314,4.98e-19,92;UBERON:0003528,2.19e-17,29;UBERON:0002791,2.19e-17,29;UBERON:0001893,2.19e-17,29;UBERON:0000956,1.82e-11,21;UBERON:0001869,1.82e-11,21;UBERON:0000203,1.82e-11,21;UBERON:0002619,1.13e-08,17;UBERON:0003076,1.59e-07,12;UBERON:0003057,1.59e-07,12;UBERON:0002420,2.71e-07,8;UBERON:0007245,2.71e-07,8;UBERON:0010009,2.71e-07,8;UBERON:0010011,2.71e-07,8;UBERON:0000454,2.71e-07,8 | |||
|phase1_expression=4.16387002472464,0,0.454999239389536,0,0,0.671517087647559,1.16806320297763,0.129123323441576,0.140788722151667,0,0.171217968225505,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0.137114433605739,0,4.84746753861098,0.198581902401771,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.816677425049476,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,3.2703773457067,1.97717564461025,0.58328969722285,0.419959264876088,4.31257693094915,0,0,0,0,0,0,20.8385954685386,26.9785399428737,7.60597684207415,0.338844532069132,0.889294796111139,0,0,0,4.79360176829448,7.30014780110954,26.0260926894279,23.6260392080459,26.2906201689228,36.8489769880907,26.7250934551452,11.8816075238505,12.3640657613525,13.7882817991503,26.4278114398533,28.2189017168265,25.3450779872802,19.3872842963385,20.6762074541446,12.5019208933622,29.5933978941464,24.7615548413939,22.1557459276375,28.5789727909458,29.4709379254143,27.7735174279698,0.227178579999552,1.43585964202892,0.289864488701678,0.860423876981386,0,0,0,0,1.54488862144927,0,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.79928715803342,0.776813650941515,2.22663208597237,0.520455980298408,0.913396434936424,1.15307748628029,0.301445281105245,0.705532242814229,0.879666139307728,0,0.289198713839823,0,0.647067399789637,0.220841518460394,0,0,4.68449275218475,5.44561437714983,1.02182822083437,0,0,0,29.6585466021549,76.4026006707106,25.1308704225729,13.3844726548053,15.5986428971502,30.7526305948149,36.9910079794487,0.305518091550949,0,0.252722758433675,4.20883711772948,4.29397461776922,6.20735681970377,8.82304436046211,10.3986324306643,11.9063873514824,12.811372028485,11.7127155699661,7.50239775143145,0.215567992932842,0.945530400839096,1.05570674498369,0.876782929710299,1.11218899690239,0.696504333044333,1.02891068203972,0.995171334092466,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0.268273401399619,0,0.329119699826961,0.164167464079095,0.324275238183423,0.146199987425332,0.439100230582101,0,7.78072809687271,8.23236899034275,0,0.793351699990633,0.426576501070468,1.39342003116263,1.28867461322093,1.61346819698674,0.667134131534611,1.33157938278791,1.42358718463353,1.97638745668813,2.76468729680296,1.39269530428806,0.974820435595601,1.79763881730844,1.29682829924817,1.1948476395262,0.569003702859245,1.14248512609729,1.1270773567308,0.203651327845314,0.775809948670503,0.49095073923223,0.632365371242573,0.442830443938806,0.470996183524124,0.740382983530803,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,2.40179147216586,0.37898282354097,0.651859905768103,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,1.56106918286239,0.315270288212382,1.32878813789265,0.956728611944923,1.63863314715738,1.20879487306127,1.01254341007058,0,0,0.491764273019036,0,22.3165320083031,18.8710815413447,0,0,1.89304931649754,4.68526493155966,4.95473814785438,0,0.668396022247182,0.566153061577665,0,1.46127928955656,3.16230222357219,26.3483479465882,0.709700426041343,1.06839362200353,1.30309567482861,0.659880491890142,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0.727067458955011,0.356497378384721,1.58018378967908,0,0,6.46835250932197,3.78128297465751,4.01011919726539,1.28602221018955,1.77340233642274,2.14042581122485,1.81003922662333,6.69822888052118,0.469343416127421,0.42366414172764,0.220528398054962,0.32977250588296,0.645857706783622,0.542816324353403,0.238744688006273,0.164140899745061,3.20628920292836,22.2510362412612,0.683483523191411,0.412773735926445,0.740778109478847,0,0.820165366326151,0,1.01987057996313,0.979660166265606,1.10559979043539,1.90934123603023,1.10717597753397,1.82987520414164,2.48412283890143,3.3454127362315,3.27543845619266,2.83215127408124,2.56225712748541,2.87931536182433,2.46268449254406,0,0,0,0.165458490457098,0.388902376688095,0.516639293910924,0.675824501963113,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0.590758108698309,0.201932899896295,0.304827226619999,0.403304740547362,0.38983152295901,0.481059208201647,0.233753804363138,0,0,0.0897138566094757,0,2.89784391048286,0,0,0.428736758158132,0,7.90652579663893,5.9842280745933,10.3121192419091,4.46818274093588,6.85082519770642,6.0431511791176,8.77529250301348,7.65546045481175,8.60970577069989,9.83744592328458,2.07574695168353,4.38927360741134,3.92687293234509,2.43106717068294,4.19226325255965,3.49302666055027,2.66696073361938,3.29656091582231,2.88827288632634,1.26348605881899,4.05566879824384,3.01802146217722,2.99652823903624,2.62503124859964,3.73330548211486,0.952587382566147,2.43357084484197,3.6652751888104,2.06042950401653,1.61918812147837,3.08582327146874,2.30718548007139,4.5302876089991,1.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| |||
|short_description=p2@Pde1b | |||
}} |
Revision as of 01:55, 5 August 2015
Short description: | p2@Pde1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pde1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2959 |
Association with transcript: | -80bp_to_ENSMUST00000023132, NM_008800, uc007xyh.1_5end |
EntrezGene: | 18574 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.52e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.52e-18 | 23 |
neuron | 1.31e-15 | 33 |
neuronal stem cell | 1.31e-15 | 33 |
neuroblast | 1.31e-15 | 33 |
electrically signaling cell | 1.31e-15 | 33 |
neural cell | 1.84e-14 | 43 |
ectodermal cell | 8.65e-14 | 44 |
neurectodermal cell | 8.65e-14 | 44 |
electrically responsive cell | 3.41e-11 | 39 |
electrically active cell | 3.41e-11 | 39 |